RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 CD109Q6YHK3 1445 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 OPLAHO14841 1288 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 SMNDC1O75940 238 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRERF1-203ENST00000372917 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 SPATS2Q86XZ4 545 aaKnown RBP12.03□□□□□ -0.48
TRERF1-203ENST00000372917 ATRIPQ8WXE1 791 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 ANKIB1Q9P2G1 1089 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 MAPK8IP1Q9UQF2 711 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 CTAGE15A4D2H0 777 aa12.02□□□□□ -0.48
TRERF1-203ENST00000372917 CTAGE8P0CG41 777 aa12.02□□□□□ -0.48
TRERF1-203ENST00000372917 ATP1A2P50993 1020 aa12.02□□□□□ -0.48
TRERF1-203ENST00000372917 TMEM110Q86TL2 294 aa12.02□□□□□ -0.48
TRERF1-203ENST00000372917 CTAGE6Q86UF2 777 aa12.02□□□□□ -0.48
TRERF1-203ENST00000372917 CTAGE4Q8IX94 777 aa12.02□□□□□ -0.48
TRERF1-203ENST00000372917 IL17RAQ96F46 866 aa12.02□□□□□ -0.48
TRERF1-203ENST00000372917 RUFY1Q96T51 708 aa12.02□□□□□ -0.48
TRERF1-203ENST00000372917 LZTFL1Q9NQ48 299 aa12.02□□□□□ -0.48
TRERF1-203ENST00000372917 ABCC1P33527 1531 aa12.02□□□□□ -0.49
TRERF1-203ENST00000372917 REREQ9P2R6 1566 aa12.02□□□□□ -0.49
TRERF1-203ENST00000372917 TFRCP02786 760 aaKnown RBP12.02□□□□□ -0.49
TRERF1-203ENST00000372917 DESI2Q9BSY9 194 aa12.02□□□□□ -0.49
TRERF1-203ENST00000372917 CDK19Q9BWU1 502 aa12.02□□□□□ -0.49
TRERF1-203ENST00000372917 OPA1O60313 960 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 CPA1P15085 419 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 GJA8P48165 433 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 CTCFP49711 727 aaPredicted RBP12.01□□□□□ -0.49
TRERF1-203ENST00000372917 MSANTD4Q8NCY6 345 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 YEATS2Q9ULM3 1422 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 KIF1BO60333 1816 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 GOLGA6L9A6NEM1 432 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 CREB3O43889 395 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 GCLCP48506 637 aaPredicted RBP12.01□□□□□ -0.49
TRERF1-203ENST00000372917 MXRA7P84157 204 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 MSL1Q68DK7 614 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 FAM163AQ96GL9 167 aaPredicted RBP12.01□□□□□ -0.49
TRERF1-203ENST00000372917 TMOD4Q9NZQ9 345 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 CORO1CQ9ULV4 474 aaPredicted RBP12.01□□□□□ -0.49
TRERF1-203ENST00000372917 HPCAL4Q9UM19 191 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 CHD1O14646 1710 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 FAM83GA6ND36 823 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
TRERF1-203ENST00000372917 LMOD1P29536 600 aaPredicted RBP12.01□□□□□ -0.49
TRERF1-203ENST00000372917 PPARDQ03181 441 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 CDC37L1Q7L3B6 337 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 LEO1Q8WVC0 666 aaPredicted RBP12.01□□□□□ -0.49
TRERF1-203ENST00000372917 CUL5Q93034 780 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 ARPC5LQ9BPX5 153 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 HDAC6Q9UBN7 1215 aa12.01□□□□□ -0.49
TRERF1-203ENST00000372917 ABCC4O15439 1325 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 AMPHP49418 695 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 POLE2P56282 527 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 PRPF4BQ13523 1007 aaKnown RBP12□□□□□ -0.49
TRERF1-203ENST00000372917 SPECC1Q5M775 1068 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 RBM43Q6ZSC3 357 aaKnown RBP12□□□□□ -0.49
TRERF1-203ENST00000372917 GET4Q7L5D6 327 aaPredicted RBP12□□□□□ -0.49
TRERF1-203ENST00000372917 ADGRB2O60241 1585 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 A0A1B0GVL5 298 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 B4DLN1 442 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12□□□□□ -0.49
TRERF1-203ENST00000372917 SERPINC1P01008 464 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 ZNF24P17028 368 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 ME3Q16798 604 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 CFAP100Q494V2 611 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 SFMBT2Q5VUG0 894 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 SULT6B1Q6IMI4 303 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 PPP1R3FQ6ZSY5 799 aaPredicted RBP12□□□□□ -0.49
TRERF1-203ENST00000372917 Q6ZUG5 572 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 HOOK3Q86VS8 718 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 ANKRD44Q8N8A2 993 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 CDC23Q9UJX2 597 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 UGGT1Q9NYU2 1555 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 NECAB1Q8N987 351 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 KCNV2Q8TDN2 545 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 UNC45AQ9H3U1 944 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 TSPYL4Q9UJ04 414 aa12□□□□□ -0.49
TRERF1-203ENST00000372917 H7C1W4 665 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 FYB1O15117 783 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 ZMYND10O75800 440 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 ANP32DO95626 131 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 Q4G0T1 1027 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 TSPYL6Q8N831 410 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 MKL1Q969V6 931 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 NUP58Q9BVL2 599 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 SUN2Q9UH99 717 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 A0A1W2PP64 1363 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 LARGE1O95461 756 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 LINGO3P0C6S8 592 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 TOP1P11387 765 aaKnown RBP11.99□□□□□ -0.49
TRERF1-203ENST00000372917 ALDH1B1P30837 517 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 SFSWAPQ12872 951 aaKnown RBP11.99□□□□□ -0.49
TRERF1-203ENST00000372917 PLCB4Q15147 1175 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 CCDC73Q6ZRK6 1079 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 CCDC148Q8NFR7 591 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 NOD2Q9HC29 1040 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 MBIPQ9NS73 344 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 HYPKQ9NX55 129 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 L3MBTL1Q9Y468 752 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 EMILIN1Q9Y6C2 1016 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 GRIN2DO15399 1336 aa11.99□□□□□ -0.49
TRERF1-203ENST00000372917 AARSP49588 968 aaKnown RBP eCLIP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms