RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 ARHGAP23Q9P227 1491 aa13.7□□□□□ -0.22
SNX21-205ENST00000372547 COBLO75128 1261 aa13.7□□□□□ -0.22
SNX21-205ENST00000372547 GRIN1Q05586 938 aa13.7□□□□□ -0.22
SNX21-205ENST00000372547 TRDNQ13061 729 aa13.7□□□□□ -0.22
SNX21-205ENST00000372547 TTC39AQ5SRH9 613 aa13.7□□□□□ -0.22
SNX21-205ENST00000372547 PUS7LQ9H0K6 701 aaKnown RBP13.7□□□□□ -0.22
SNX21-205ENST00000372547 SENP2Q9HC62 589 aa13.7□□□□□ -0.22
SNX21-205ENST00000372547 MAN1B1Q9UKM7 699 aa13.7□□□□□ -0.22
SNX21-205ENST00000372547 RFX7Q2KHR2 1363 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 TEX33O43247 280 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 KIF5CO60282 957 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 CUTAO60888 179 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 SRGAP1Q7Z6B7 1085 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 ANKLE2Q86XL3 938 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 NKX2-3Q8TAU0 364 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 RAI14Q9P0K7 980 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 HPSEQ9Y251 543 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 AXIN2Q9Y2T1 843 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 LTN1O94822 1766 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 HEG1Q9ULI3 1381 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 ADORA1P30542 326 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 RABL6Q3YEC7 729 aaPredicted RBP13.69□□□□□ -0.22
SNX21-205ENST00000372547 RESP18Q5W5W9 173 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 HDXQ7Z353 690 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 MB21D2Q8IYB1 491 aaPredicted RBP13.69□□□□□ -0.22
SNX21-205ENST00000372547 ANKZF1Q9H8Y5 726 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 SERTAD1Q9UHV2 236 aa13.69□□□□□ -0.22
SNX21-205ENST00000372547 ZNF330Q9Y3S2 320 aaPredicted RBP13.69□□□□□ -0.22
SNX21-205ENST00000372547 GCP02774 474 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 TBX2Q13207 712 aaPredicted RBP13.68□□□□□ -0.22
SNX21-205ENST00000372547 POSTNQ15063 836 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 PTPAQ15257 358 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 HSP90B2PQ58FF3 399 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 PPFIBP1Q86W92 1011 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
SNX21-205ENST00000372547 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 AKR1B15C9JRZ8 316 aaPredicted RBP13.68□□□□□ -0.22
SNX21-205ENST00000372547 ZC3H6P61129 1189 aaKnown RBP13.68□□□□□ -0.22
SNX21-205ENST00000372547 BRD3Q15059 726 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 RAD9BQ6WBX8 426 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 KCNH5Q8NCM2 988 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 RGS22Q8NE09 1264 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 SLC26A6Q9BXS9 759 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 TEX13AQ9BXU3 409 aaPredicted RBP13.68□□□□□ -0.22
SNX21-205ENST00000372547 INCENPQ9NQS7 918 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
SNX21-205ENST00000372547 FOXP2O15409 715 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 PPP6R2O75170 966 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 ABL1P00519 1130 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 RBL2Q08999 1139 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 SCARF1Q14162 830 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 BEND6Q5SZJ8 279 aaPredicted RBP13.67□□□□□ -0.22
SNX21-205ENST00000372547 B4E1Z4 1266 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 ERLIN1O75477 346 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 EIF3JO75822 258 aaKnown RBP13.67□□□□□ -0.22
SNX21-205ENST00000372547 CASP1P29466 404 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 IARSP41252 1262 aaKnown RBP13.67□□□□□ -0.22
SNX21-205ENST00000372547 CPLX2Q6PUV4 134 aaKnown RBP13.67□□□□□ -0.22
SNX21-205ENST00000372547 IGSF22Q8N9C0 903 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 RAPGEF4Q8WZA2 1011 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 GDAP1L1Q96MZ0 367 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 ZBTB3Q9H5J0 574 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 SLC52A2Q9HAB3 445 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 HOOK1Q9UJC3 728 aaKnown RBP13.67□□□□□ -0.22
SNX21-205ENST00000372547 KCNJ14Q9UNX9 436 aa13.67□□□□□ -0.22
SNX21-205ENST00000372547 GPAA1O43292 621 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 ZAP70P43403 619 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 AFMP43652 599 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 VSNL1P62760 191 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 FOXO4P98177 505 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 SLC9C2Q5TAH2 1124 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 CYB5R4Q7L1T6 521 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 SLC35F6Q8N357 371 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 KRI1Q8N9T8 703 aaKnown RBP13.66□□□□□ -0.22
SNX21-205ENST00000372547 ACRBPQ8NEB7 543 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 MAP3K14Q99558 947 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNX21-205ENST00000372547 MRC1P22897 1456 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 BTBD18B2RXH4 712 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 MAP2K7O14733 419 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 IL15P40933 162 aaPredicted RBP13.66□□□□□ -0.22
SNX21-205ENST00000372547 CMTR1Q8N1G2 835 aaKnown RBP13.66□□□□□ -0.22
SNX21-205ENST00000372547 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 CEP126Q9P2H0 1117 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 CDC23Q9UJX2 597 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 SNRPA1P09661 255 aaKnown RBP13.66□□□□□ -0.22
SNX21-205ENST00000372547 AKAP17AQ02040 695 aaKnown RBP13.66□□□□□ -0.22
SNX21-205ENST00000372547 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
SNX21-205ENST00000372547 SMYD4Q8IYR2 804 aaPredicted RBP13.66□□□□□ -0.22
SNX21-205ENST00000372547 GOLGA6L1Q8N7Z2 621 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 CEP112Q8N8E3 955 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
SNX21-205ENST00000372547 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
SNX21-205ENST00000372547 ADGRG1Q9Y653 693 aa13.66□□□□□ -0.22
SNX21-205ENST00000372547 CTAGE9A4FU28 777 aa13.65□□□□□ -0.22
SNX21-205ENST00000372547 GOLGA8AA7E2F4 631 aa13.65□□□□□ -0.22
SNX21-205ENST00000372547 EYA2O00167 538 aa13.65□□□□□ -0.22
SNX21-205ENST00000372547 USP49Q70CQ1 688 aa13.65□□□□□ -0.22
SNX21-205ENST00000372547 SEC31BQ9NQW1 1179 aa13.65□□□□□ -0.22
SNX21-205ENST00000372547 CASP14P31944 242 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms