RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 COQ9O75208 318 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 PHKG2P15735 406 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
ATG4A-203ENST00000372232 CHMLP26374 656 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 MTX1Q13505 466 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 ZNF790Q6PG37 636 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 ERC1Q8IUD2 1116 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 ZNF454Q8N9F8 522 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 SYMPKQ92797 1274 aaKnown RBP10.18□□□□□ -0.78
ATG4A-203ENST00000372232 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
ATG4A-203ENST00000372232 TMEM134Q9H6X4 195 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 SLC52A2Q9HAB3 445 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 NRBP1Q9UHY1 535 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 TSKSQ9UJT2 592 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 SPG7Q9UQ90 795 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 ADAMTS7Q9UKP4 1686 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 FAM196BA6NMK8 535 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 NPHP1O15259 732 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 HNRNPH1P31943 449 aaKnown RBP10.18□□□□□ -0.78
ATG4A-203ENST00000372232 PTK7Q13308 1070 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 CUL4AQ13619 759 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 FOXR1Q6PIV2 292 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 UNC5CLQ8IV45 518 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 GIMAP7Q8NHV1 300 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 FAM200AQ8TCP9 573 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 RILPL2Q969X0 211 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 PAIP2Q9BPZ3 127 aaKnown RBP10.18□□□□□ -0.78
ATG4A-203ENST00000372232 TEX13AQ9BXU3 409 aaPredicted RBP10.18□□□□□ -0.78
ATG4A-203ENST00000372232 FAM107BQ9H098 131 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 DDX21Q9NR30 783 aaKnown RBP eCLIP10.18□□□□□ -0.78
ATG4A-203ENST00000372232 KDM6AO15550 1401 aaPredicted RBP10.18□□□□□ -0.78
ATG4A-203ENST00000372232 ABL1P00519 1130 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 FBXO45P0C2W1 286 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 VAMP1P23763 118 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 CDC25BP30305 580 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 ELF1P32519 619 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 ZNF75DP51815 510 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 EIF5P55010 431 aaKnown RBP10.17□□□□□ -0.78
ATG4A-203ENST00000372232 UBE2HP62256 183 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 HSP90AB4PQ58FF6 505 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 TEX11Q8IYF3 940 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 SRRTQ9BXP5 876 aaKnown RBP10.17□□□□□ -0.78
ATG4A-203ENST00000372232 C9orf78Q9NZ63 289 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-203ENST00000372232 TNS3Q68CZ2 1445 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 RPAP1Q9BWH6 1393 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-203ENST00000372232 ANKRD62A6NC57 917 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 NEBLO76041 1014 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 SLC39A6Q13433 755 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 KCNV1Q6PIU1 500 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 GBP6Q6ZN66 633 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 ANKRD23Q86SG2 305 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 KAT2BQ92831 832 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 ZDHHC16Q969W1 377 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 PCDHGA4Q9Y5G9 962 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.17□□□□□ -0.78
ATG4A-203ENST00000372232 RGPD5Q99666 1765 aa10.17□□□□□ -0.78
ATG4A-203ENST00000372232 MEGF6O75095 1541 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 SPATA31A3Q5VYP0 1347 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 SIPA1L3O60292 1781 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 UBAP1LF5GYI3 381 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 CCDC192P0DO97 292 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 TBC1D8BQ0IIM8 1120 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 GRIK3Q13003 919 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 NEDD9Q14511 834 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 CHRNA2Q15822 529 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 CWF19L2Q2TBE0 894 aaKnown RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 CCDC158Q5M9N0 1113 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 CC2D1AQ6P1N0 951 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 IFNL2Q8IZJ0 200 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 LRRN4CLQ8ND94 238 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 LINS1Q8NG48 757 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 PI4K2BQ8TCG2 481 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 ERCC4Q92889 916 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 CLP1Q92989 425 aaKnown RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 INTS4Q96HW7 963 aaKnown RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 MCM8Q9UJA3 840 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 ANKRD18BA2A2Z9 1011 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 H3BRB1 525 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 SMAPO00193 183 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 SEC31AO94979 1220 aaKnown RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 GCFC2P16383 781 aaKnown RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 PLCG2P16885 1265 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 DNAJB2P25686 324 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 ERCC5P28715 1186 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 TTLL5Q6EMB2 1281 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 CWC27Q6UX04 472 aaKnown RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 SLF2Q8IX21 1173 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 DRC7Q8IY82 874 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 CCAR2Q8N163 923 aaKnown RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 MICALL1Q8N3F8 863 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 TMX3Q96JJ7 454 aa10.16□□□□□ -0.78
ATG4A-203ENST00000372232 TUT1Q9H6E5 874 aaKnown RBP10.16□□□□□ -0.78
ATG4A-203ENST00000372232 UTYO14607 1347 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 COL18A1P39060 1754 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 ABCC6O95255 1503 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 TUBB4AP04350 444 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 COL9A1P20849 921 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 RASA1P20936 1047 aa10.15□□□□□ -0.78
ATG4A-203ENST00000372232 RBM5P52756 815 aaKnown RBP eCLIP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms