RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 ZBTB7AO95365 584 aa12.46□□□□□ -0.41
TPM3-212ENST00000368533 F13A1P00488 732 aa12.46□□□□□ -0.41
TPM3-212ENST00000368533 DNM1Q05193 864 aaKnown RBP12.46□□□□□ -0.41
TPM3-212ENST00000368533 C2CD5Q86YS7 1000 aa12.46□□□□□ -0.41
TPM3-212ENST00000368533 IPO4Q8TEX9 1081 aaKnown RBP12.46□□□□□ -0.41
TPM3-212ENST00000368533 KCNQ5Q9NR82 932 aa12.46□□□□□ -0.41
TPM3-212ENST00000368533 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.41
TPM3-212ENST00000368533 MYH13Q9UKX3 1938 aa12.46□□□□□ -0.42
TPM3-212ENST00000368533 SRGNP10124 158 aa12.46□□□□□ -0.42
TPM3-212ENST00000368533 SCRN1Q12765 414 aa12.46□□□□□ -0.42
TPM3-212ENST00000368533 CCDC82Q8N4S0 544 aa12.46□□□□□ -0.42
TPM3-212ENST00000368533 TBC1D16Q8TBP0 767 aa12.46□□□□□ -0.42
TPM3-212ENST00000368533 CYP2D6P10635 497 aa12.45□□□□□ -0.42
TPM3-212ENST00000368533 CDK11BP21127 795 aaKnown RBP12.45□□□□□ -0.42
TPM3-212ENST00000368533 ANTXR2P58335 489 aa12.45□□□□□ -0.42
TPM3-212ENST00000368533 GTF2IP78347 998 aa12.45□□□□□ -0.42
TPM3-212ENST00000368533 LARP1BQ659C4 914 aaKnown RBP12.45□□□□□ -0.42
TPM3-212ENST00000368533 NSUN4Q96CB9 384 aaKnown RBP12.45□□□□□ -0.42
TPM3-212ENST00000368533 DBNDD1Q9H9R9 158 aa12.45□□□□□ -0.42
TPM3-212ENST00000368533 PATL2C9JE40 543 aaKnown RBP12.45□□□□□ -0.42
TPM3-212ENST00000368533 TRDNQ13061 729 aa12.45□□□□□ -0.42
TPM3-212ENST00000368533 CERS3Q8IU89 383 aa12.45□□□□□ -0.42
TPM3-212ENST00000368533 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 G3V3G9 751 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 PDCL2Q8N4E4 241 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 IL17RAQ96F46 866 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 ZSCAN31Q96LW9 406 aaPredicted RBP12.44□□□□□ -0.42
TPM3-212ENST00000368533 BRIP1Q9BX63 1249 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 CD209Q9NNX6 404 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 GJB4Q9NTQ9 266 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 MTMR7Q9Y216 660 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
TPM3-212ENST00000368533 TSGA10IPQ3SY00 556 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 MICU3Q86XE3 530 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 NCOA7Q8NI08 942 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 CCDC183Q5T5S1 534 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 OTUD7BQ6GQQ9 843 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 CDC37L1Q7L3B6 337 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 ZNF804AQ7Z570 1209 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 CMTR1Q8N1G2 835 aaKnown RBP12.44□□□□□ -0.42
TPM3-212ENST00000368533 SH2B1Q9NRF2 756 aaPredicted RBP12.44□□□□□ -0.42
TPM3-212ENST00000368533 USP25Q9UHP3 1055 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 SAP30BPQ9UHR5 308 aaKnown RBP12.44□□□□□ -0.42
TPM3-212ENST00000368533 KIF3AQ9Y496 699 aa12.44□□□□□ -0.42
TPM3-212ENST00000368533 LAMA4Q16363 1823 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 GOLGA8BA8MQT2 603 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 LDHBP07195 334 aaKnown RBP12.43□□□□□ -0.42
TPM3-212ENST00000368533 UBE2HP62256 183 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 GIMAP6Q6P9H5 292 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 DPP8Q6V1X1 898 aaPredicted RBP12.43□□□□□ -0.42
TPM3-212ENST00000368533 NFXL1Q6ZNB6 911 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 BAZ2AQ9UIF9 1905 aaKnown RBP12.43□□□□□ -0.42
TPM3-212ENST00000368533 GOLGA6L4A6NEF3 574 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 UBE2Q2LH0YL09 131 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 BAG6P46379 1132 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 SCNN1DP51172 638 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 EXOSC10Q01780 885 aaKnown RBP12.43□□□□□ -0.42
TPM3-212ENST00000368533 MFSD14BQ5SR56 506 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 RIOK1Q9BRS2 568 aaKnown RBP12.43□□□□□ -0.42
TPM3-212ENST00000368533 CACNA1SQ13698 1873 aa12.43□□□□□ -0.42
TPM3-212ENST00000368533 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 USP17L21D6R901 530 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 RGL2O15211 777 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 BBOX1O75936 387 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 MCM5P33992 734 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 NOLC1Q14978 699 aaKnown RBP eCLIP12.42□□□□□ -0.42
TPM3-212ENST00000368533 ANKRD1Q15327 319 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 MB21D2Q8IYB1 491 aaPredicted RBP12.42□□□□□ -0.42
TPM3-212ENST00000368533 TRERF1Q96PN7 1200 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 ZSWIM5Q9P217 1185 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 LEMD3Q9Y2U8 911 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 A0A1B0GUL6 1792 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 USP17L8P0C7I0 530 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
TPM3-212ENST00000368533 GTF3C6Q969F1 213 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 NACAP1Q9BZK3 213 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 MTMR6Q9Y217 621 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 ARAP2Q8WZ64 1704 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 RANBP6O60518 1105 aaKnown RBP12.42□□□□□ -0.42
TPM3-212ENST00000368533 MFSD6Q6ZSS7 791 aa12.42□□□□□ -0.42
TPM3-212ENST00000368533 SH3RF3Q8TEJ3 882 aaPredicted RBP12.42□□□□□ -0.42
TPM3-212ENST00000368533 ZC3H12CQ9C0D7 883 aaKnown RBP12.42□□□□□ -0.42
TPM3-212ENST00000368533 H0YIN7 160 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 C21orf2O43822 256 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 NMT2O60551 498 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 SLURP2P0DP57 97 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 PDIA3P30101 505 aaKnown RBP12.41□□□□□ -0.42
TPM3-212ENST00000368533 FAM47AQ5JRC9 791 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 MAPKAPK5Q8IW41 473 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 TFIP11Q9UBB9 837 aaKnown RBP12.41□□□□□ -0.42
TPM3-212ENST00000368533 IRS2Q9Y4H2 1338 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 TCHHQ07283 1943 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 IFIT3O14879 490 aaKnown RBP12.41□□□□□ -0.42
TPM3-212ENST00000368533 NPR1P16066 1061 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 PDE6BP35913 854 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 PPARAQ07869 468 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 FAM184AQ8NB25 1140 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 TDRD7Q8NHU6 1098 aaKnown RBP12.41□□□□□ -0.42
TPM3-212ENST00000368533 TGFBRAP1Q8WUH2 860 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms