RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 GLI1P08151 1106 aa5.06□□□□□ -1.6
RNU6-238P-201ENST00000363313 ZNF865P0CJ78 1059 aaPredicted RBP5.06□□□□□ -1.6
RNU6-238P-201ENST00000363313 LCNL1Q6ZST4 164 aa5.06□□□□□ -1.6
RNU6-238P-201ENST00000363313 CCDC120Q96HB5 630 aa5.06□□□□□ -1.6
RNU6-238P-201ENST00000363313 CCDC86Q9H6F5 360 aaKnown RBP5.06□□□□□ -1.6
RNU6-238P-201ENST00000363313 CTNND2Q9UQB3 1225 aa5.06□□□□□ -1.6
RNU6-238P-201ENST00000363313 B8ZZF3 427 aa5.05□□□□□ -1.6
RNU6-238P-201ENST00000363313 ZSCAN22P10073 491 aaPredicted RBP5.05□□□□□ -1.6
RNU6-238P-201ENST00000363313 LIG1P18858 919 aa5.05□□□□□ -1.6
RNU6-238P-201ENST00000363313 CLCN7P51798 805 aa5.05□□□□□ -1.6
RNU6-238P-201ENST00000363313 ZP2Q05996 745 aa5.05□□□□□ -1.6
RNU6-238P-201ENST00000363313 FAM214BQ7L5A3 538 aa5.05□□□□□ -1.6
RNU6-238P-201ENST00000363313 EHD4Q9H223 541 aa5.05□□□□□ -1.6
RNU6-238P-201ENST00000363313 TRAK1Q9UPV9 953 aa5.05□□□□□ -1.6
RNU6-238P-201ENST00000363313 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 NFIBO00712 420 aa5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 ZNF862O60290 1169 aa5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 LEFTY1O75610 366 aa5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 GSTP1P09211 210 aaKnown RBP5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 CD96P40200 585 aa5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 ERVK-24P63145 666 aa5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 PPP2R3AQ06190 1150 aa5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 TTLL4Q14679 1199 aa5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 SYDE1Q6ZW31 735 aaPredicted RBP5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 RNF214Q8ND24 703 aa5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 CITED4Q96RK1 184 aa5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 SERPINA10Q9UK55 444 aa5.04□□□□□ -1.6
RNU6-238P-201ENST00000363313 RNGTTO60942 597 aaKnown RBP5.03□□□□□ -1.6
RNU6-238P-201ENST00000363313 CPNE3O75131 537 aaKnown RBP5.03□□□□□ -1.6
RNU6-238P-201ENST00000363313 PDE3BQ13370 1112 aa5.03□□□□□ -1.6
RNU6-238P-201ENST00000363313 IKZF1Q13422 519 aa5.03□□□□□ -1.6
RNU6-238P-201ENST00000363313 FBXO15Q8NCQ5 510 aaPredicted RBP5.03□□□□□ -1.6
RNU6-238P-201ENST00000363313 WDR89Q96FK6 387 aaPredicted RBP5.03□□□□□ -1.6
RNU6-238P-201ENST00000363313 HEXIM2Q96MH2 286 aaKnown RBP5.03□□□□□ -1.6
RNU6-238P-201ENST00000363313 DNAJC25Q9H1X3 360 aa5.03□□□□□ -1.6
RNU6-238P-201ENST00000363313 CCDC87Q9NVE4 849 aa5.03□□□□□ -1.6
RNU6-238P-201ENST00000363313 U3KQE9 123 aa5.03□□□□□ -1.6
RNU6-238P-201ENST00000363313 TMEM238LA0A1B0GVL6 79 aa5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 XRCC5P13010 732 aaKnown RBP5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 PRKCSHP14314 528 aaPredicted RBP5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 GDNFP39905 211 aa5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 MTMR3Q13615 1198 aa5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 ZC3H12AQ5D1E8 599 aaKnown RBP5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 TMEM67Q5HYA8 995 aa5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 CYFIP1Q7L576 1253 aa5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 SPACA3Q8IXA5 215 aa5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 LIN37Q96GY3 246 aaPredicted RBP5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 KIRREL1Q96J84 757 aa5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 ABCB6Q9NP58 842 aa5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 PPP4R2Q9NY27 417 aa5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 EGFL7Q9UHF1 273 aa5.02□□□□□ -1.61
RNU6-238P-201ENST00000363313 KRT1P04264 644 aa5.01□□□□□ -1.61
RNU6-238P-201ENST00000363313 HCLS1P14317 486 aaPredicted RBP5.01□□□□□ -1.61
RNU6-238P-201ENST00000363313 PDZD3Q86UT5 571 aa5.01□□□□□ -1.61
RNU6-238P-201ENST00000363313 TOP6BLQ8N6T0 577 aa5.01□□□□□ -1.61
RNU6-238P-201ENST00000363313 ISL2Q96A47 359 aa5.01□□□□□ -1.61
RNU6-238P-201ENST00000363313 CCDC97Q96F63 343 aaPredicted RBP5.01□□□□□ -1.61
RNU6-238P-201ENST00000363313 EMILIN2Q9BXX0 1053 aa5.01□□□□□ -1.61
RNU6-238P-201ENST00000363313 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
RNU6-238P-201ENST00000363313 SSU72Q9NP77 194 aaKnown RBP5.01□□□□□ -1.61
RNU6-238P-201ENST00000363313 TMEM39AQ9NV64 488 aa5.01□□□□□ -1.61
RNU6-238P-201ENST00000363313 PITPNM2Q9BZ72 1349 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 TMEM88BA6NKF7 163 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 TMEM253P0C7T8 217 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 C1QTNF9P0C862 333 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 MED14OSP0DP75 135 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 NKPD1Q17RQ9 610 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 SCARA3Q6AZY7 606 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 MPZL3Q6UWV2 235 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 C22orf34Q6ZV56 151 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 NPAS4Q8IUM7 802 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 KCT2Q8NC54 265 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 PRDM10Q9NQV6 1147 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 BRPF3Q9ULD4 1205 aa5□□□□□ -1.61
RNU6-238P-201ENST00000363313 GNAT3A8MTJ3 354 aa4.99□□□□□ -1.61
RNU6-238P-201ENST00000363313 PPP1R15AO75807 674 aaPredicted RBP4.99□□□□□ -1.61
RNU6-238P-201ENST00000363313 NEFMP07197 916 aa4.99□□□□□ -1.61
RNU6-238P-201ENST00000363313 SRFP11831 508 aa4.99□□□□□ -1.61
RNU6-238P-201ENST00000363313 ITIH2P19823 946 aa4.99□□□□□ -1.61
RNU6-238P-201ENST00000363313 FAAP100Q0VG06 881 aa4.99□□□□□ -1.61
RNU6-238P-201ENST00000363313 FYB2Q5VWT5 728 aa4.99□□□□□ -1.61
RNU6-238P-201ENST00000363313 PRR23BQ6ZRT6 265 aa4.99□□□□□ -1.61
RNU6-238P-201ENST00000363313 CACNA2D2Q9NY47 1150 aa4.99□□□□□ -1.61
RNU6-238P-201ENST00000363313 MAPK8IP1Q9UQF2 711 aa4.99□□□□□ -1.61
RNU6-238P-201ENST00000363313 GLDCP23378 1020 aa4.98□□□□□ -1.61
RNU6-238P-201ENST00000363313 ARNTP27540 789 aa4.98□□□□□ -1.61
RNU6-238P-201ENST00000363313 ECM1Q16610 540 aa4.98□□□□□ -1.61
RNU6-238P-201ENST00000363313 CCDC74AQ96AQ1 378 aa4.98□□□□□ -1.61
RNU6-238P-201ENST00000363313 FAM129BQ96TA1 746 aa4.98□□□□□ -1.61
RNU6-238P-201ENST00000363313 NPHS2Q9NP85 383 aa4.98□□□□□ -1.61
RNU6-238P-201ENST00000363313 CD320Q9NPF0 282 aa4.98□□□□□ -1.61
RNU6-238P-201ENST00000363313 PRDM7Q9NQW5 492 aa4.98□□□□□ -1.61
RNU6-238P-201ENST00000363313 FANCGO15287 622 aa4.97□□□□□ -1.61
RNU6-238P-201ENST00000363313 NDUFB5O43674 189 aa4.97□□□□□ -1.61
RNU6-238P-201ENST00000363313 ICMTO60725 284 aa4.97□□□□□ -1.61
RNU6-238P-201ENST00000363313 KCNA10Q16322 511 aa4.97□□□□□ -1.61
RNU6-238P-201ENST00000363313 USPL1Q5W0Q7 1092 aa4.97□□□□□ -1.61
RNU6-238P-201ENST00000363313 CIAPIN1Q6FI81 312 aa4.97□□□□□ -1.61
RNU6-238P-201ENST00000363313 KCNB2Q92953 911 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms