RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 PDE4BQ07343 736 aa4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 CAMK2GQ13555 558 aaPredicted RBP4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 DOC2BQ14184 412 aa4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 ZC3H12AQ5D1E8 599 aaKnown RBP4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 PRR23CQ6ZRP0 262 aa4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 CDC37L1Q7L3B6 337 aa4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 USP48Q86UV5 1035 aa4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 FAM20CQ8IXL6 584 aa4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 C2CD4AQ8NCU7 369 aaPredicted RBP4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 RNF214Q8ND24 703 aa4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 FANCD2OSQ96PS1 177 aa4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 SSU72Q9NP77 194 aaKnown RBP4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 KBTBD4Q9NVX7 518 aa4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 SUPT16HQ9Y5B9 1047 aaKnown RBP4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 ACTL7BQ9Y614 415 aa4.41□□□□□ -1.7
RNU6-428P-201ENST00000362942 FAM95CA0A1B0GW59 222 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 UNCXA6NJT0 531 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 MINDY4BA8MYZ0 360 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 FANCGO15287 622 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 RNGTTO60942 597 aaKnown RBP4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 PF4P02776 101 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 DRD2P14416 443 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 MAP4P27816 1152 aaKnown RBP4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 EIF4A3P38919 411 aaKnown RBP4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 RPL6Q02878 288 aaKnown RBP4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 NFKBIBQ15653 356 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 BEND4Q6ZU67 534 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 ZNF654Q8IZM8 581 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 ARMC10Q8N2F6 343 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 GATAD2BQ8WXI9 593 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 EZH1Q92800 747 aaPredicted RBP4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 JARID2Q92833 1246 aaPredicted RBP4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 GAL3ST3Q96A11 431 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 WDR89Q96FK6 387 aaPredicted RBP4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 RHOVQ96L33 236 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 FAM83CQ9BQN1 747 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 GSX1Q9H4S2 264 aaPredicted RBP4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 KIAA1522Q9P206 1035 aaPredicted RBP4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 PCOLCE2Q9UKZ9 415 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 TLR6Q9Y2C9 796 aa4.4□□□□□ -1.71
RNU6-428P-201ENST00000362942 TCF3P15923 654 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 RAB6AP20340 208 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 SEPT6Q14141 434 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 MLECQ14165 292 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 MPP2Q14168 576 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 CWF19L2Q2TBE0 894 aaKnown RBP4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 SGO2Q562F6 1265 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 KIAA0825Q8IV33 1275 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 SMYD4Q8IYR2 804 aaPredicted RBP4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 GOLM1Q8NBJ4 401 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 ZNF507Q8TCN5 953 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 SPATA32Q96LK8 384 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 ACSS3Q9H6R3 686 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 PPP1R9AQ9ULJ8 1098 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 PCDHB5Q9Y5E4 795 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 PCDHGC5Q9Y5F6 944 aa4.39□□□□□ -1.71
RNU6-428P-201ENST00000362942 PRAMEF27A3QJZ7 478 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 DCDC2CA8MYV0 355 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 ETF1P62495 437 aaKnown RBP4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 CYP27A1Q02318 531 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 TTLL4Q14679 1199 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 RSPO4Q2I0M5 234 aaPredicted RBP4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 NKAPLQ5M9Q1 402 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 WIPI1Q5MNZ9 446 aaPredicted RBP4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 RASIP1Q5U651 963 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 CDPF1Q6NVV7 123 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 LRFN4Q6PJG9 635 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 C12orf40Q86WS4 652 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 FBLIM1Q8WUP2 373 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 PLPPR2Q96GM1 343 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 SPON2Q9BUD6 331 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 DISC1Q9NRI5 854 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 FAM105AQ9NUU6 356 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 DAGLAQ9Y4D2 1042 aa4.38□□□□□ -1.71
RNU6-428P-201ENST00000362942 F6X3S4 739 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 DYRK3O43781 588 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 CILPO75339 1184 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 IGLV1-40P01703 118 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 NFICP08651 508 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 HCLS1P14317 486 aaPredicted RBP4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 FAM160A1Q05DH4 1040 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 CPSF6Q16630 551 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 PPM1JQ5JR12 505 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 LDLRAD1Q5T700 205 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 RNF43Q68DV7 783 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 MPRIPQ6WCQ1 1025 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 FAM196AQ6ZSG2 479 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 CYFIP1Q7L576 1253 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 NT5DC4Q86YG4 428 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 ZNF296Q8WUU4 475 aaPredicted RBP4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 DBNDD2Q9BQY9 259 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 METTL22Q9BUU2 404 aaPredicted RBP4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 NT5C1AQ9BXI3 368 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 LRRC3Q9BY71 257 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 TGIF2Q9GZN2 237 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 WNT10AQ9GZT5 417 aa4.37□□□□□ -1.71
RNU6-428P-201ENST00000362942 SEMA6CQ9H3T2 930 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms