RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.38□□□□□ -1.87
LTN1-201ENST00000361371 SNED1Q8TER0 1413 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 GPR75-ASB3A0A0A6YYF3 556 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 KIF28PB7ZC32 967 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 EPB41L2O43491 1005 aaKnown RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 TAL1P17542 331 aaPredicted RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 CEBPZQ03701 1054 aaKnown RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 DNM1Q05193 864 aaKnown RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 ZNF804AQ7Z570 1209 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 FAM198AQ9UFP1 575 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 SMC3Q9UQE7 1217 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 CNPY2Q9Y2B0 182 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 C4BP0C0L5 1744 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 SH2B2O14492 632 aaPredicted RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 IFIT3O14879 490 aaKnown RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 PLEKHA8P1O95397 391 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 TFAP4Q01664 338 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 ALX1Q15699 326 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 C12orf60Q5U649 245 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 TEX11Q8IYF3 940 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 NCOA7Q8NI08 942 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 NUP133Q8WUM0 1156 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 USP40Q9NVE5 1235 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 PSMD14O00487 310 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 RASA1P20936 1047 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 NTRK3Q16288 839 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 TTC6Q86TZ1 520 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 LARGE2Q8N3Y3 721 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 GTF3C6Q969F1 213 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 FHDC1Q9C0D6 1143 aaPredicted RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 COA1Q9GZY4 146 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 RFX7Q2KHR2 1363 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 COL4A5P29400 1685 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 A0A087WWV3 80 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 GOLGA8BA8MQT2 603 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 WNT7AO00755 349 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 PFKFB2O60825 505 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 AKR1B1P15121 316 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 ALDH1B1P30837 517 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 ZSCAN25Q6NSZ9 544 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 SAMD7Q7Z3H4 446 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 STAG2Q8N3U4 1231 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 ENAHQ8N8S7 591 aaPredicted RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 CNKSR1Q969H4 720 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 LY9Q9HBG7 655 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 LMBRD1Q9NUN5 540 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 KCNJ14Q9UNX9 436 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 LRP5O75197 1615 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 FAM205AQ6ZU69 1335 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 FIBPO43427 364 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 USP5P45974 858 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 EARS2Q5JPH6 523 aaKnown RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 LARP1BQ659C4 914 aaKnown RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 RALYLQ86SE5 291 aaKnown RBP3.38□□□□□ -1.87
LTN1-201ENST00000361371 GMLQ99445 158 aa3.38□□□□□ -1.87
LTN1-201ENST00000361371 MROH7-TTC4A0A0A0MT08 1334 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 STX6O43752 255 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 TMEM67Q5HYA8 995 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 MFSD6Q6ZSS7 791 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 SMARCC2Q8TAQ2 1214 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 WDR66Q8TBY9 1149 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 OXER1Q8TDS5 423 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 CTNNA3Q9UI47 895 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 TNRC6CQ9HCJ0 1690 aaKnown RBP3.37□□□□□ -1.87
LTN1-201ENST00000361371 GAKO14976 1311 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 SEMA3EO15041 775 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 PSMA5P28066 241 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 CRKP46108 304 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 EVCP57679 992 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 NBPF9Q3BBW0 867 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 TYW1BQ6NUM6 668 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 GPT2Q8TD30 523 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 UBA5Q9GZZ9 404 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 ORC3Q9UBD5 711 aaPredicted RBP3.37□□□□□ -1.87
LTN1-201ENST00000361371 TCP10L2B9ZVM9 353 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 MCM5P33992 734 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 RBM5P52756 815 aaKnown RBP eCLIP3.37□□□□□ -1.87
LTN1-201ENST00000361371 TROAPQ12815 778 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 DGKZQ13574 1117 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 ERCC4Q92889 916 aaPredicted RBP3.37□□□□□ -1.87
LTN1-201ENST00000361371 MTFR1LQ9H019 292 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 FLT1P17948 1338 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 G3V3G9 751 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 TRAK2O60296 914 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 POLR3DP05423 398 aaPredicted RBP3.37□□□□□ -1.87
LTN1-201ENST00000361371 PPP4CP60510 307 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 DCAF8Q5TAQ9 597 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 STYK1Q6J9G0 422 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 PODNQ7Z5L7 613 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 SIAH1Q8IUQ4 282 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 SLC16A10Q8TF71 515 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 GLIS2Q9BZE0 524 aaPredicted RBP3.37□□□□□ -1.87
LTN1-201ENST00000361371 ARFGEF2Q9Y6D5 1785 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 GDF11O95390 407 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 F13A1P00488 732 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 NCLP19338 710 aaKnown RBP3.37□□□□□ -1.87
LTN1-201ENST00000361371 ATP2B1P20020 1258 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 FMR1Q06787 632 aaKnown RBP eCLIP3.37□□□□□ -1.87
LTN1-201ENST00000361371 KRT32Q14532 448 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 INTS4Q96HW7 963 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms