RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 ERO1AQ96HE7 468 aa11.08□□□□□ -0.64
RPE-201ENST00000354506 RANBP6O60518 1105 aaKnown RBP11.07□□□□□ -0.64
RPE-201ENST00000354506 TFRCP02786 760 aaKnown RBP11.07□□□□□ -0.64
RPE-201ENST00000354506 SLFN14P0C7P3 912 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
RPE-201ENST00000354506 DHX8Q14562 1220 aaKnown RBP11.07□□□□□ -0.64
RPE-201ENST00000354506 APOA5Q6Q788 366 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 TOM1L2Q6ZVM7 507 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 BRINP3Q76B58 766 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 MICU3Q86XE3 530 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 VPS37DQ86XT2 251 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
RPE-201ENST00000354506 LY9Q9HBG7 655 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 SOS2Q07890 1332 aaPredicted RBP11.07□□□□□ -0.64
RPE-201ENST00000354506 MAP3K15Q6ZN16 1313 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 ITGB4P16144 1822 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 SNAP23O00161 211 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 TUBB4AP04350 444 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 TTF1Q15361 905 aaPredicted RBP11.07□□□□□ -0.64
RPE-201ENST00000354506 HLFQ16534 295 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 KRT40Q6A162 431 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 NLRP10Q86W26 655 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 GRAMD1CQ8IYS0 662 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 CPLX3Q8WVH0 158 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 DESI2Q9BSY9 194 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 TEX13AQ9BXU3 409 aaPredicted RBP11.07□□□□□ -0.64
RPE-201ENST00000354506 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.07□□□□□ -0.64
RPE-201ENST00000354506 GREM2Q9H772 168 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 BCORQ6W2J9 1755 aa11.07□□□□□ -0.64
RPE-201ENST00000354506 KAT6BQ8WYB5 2073 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 SLU7O95391 586 aaKnown RBP11.06□□□□□ -0.64
RPE-201ENST00000354506 FGFR2P21802 821 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 ITGA6P23229 1130 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 SLC9C2Q5TAH2 1124 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 RALYLQ86SE5 291 aaKnown RBP11.06□□□□□ -0.64
RPE-201ENST00000354506 NEK11Q8NG66 645 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 BBXQ8WY36 941 aaPredicted RBP11.06□□□□□ -0.64
RPE-201ENST00000354506 TMEM87BQ96K49 555 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 STRBPQ96SI9 672 aaKnown RBP11.06□□□□□ -0.64
RPE-201ENST00000354506 ALG1Q9BT22 464 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.06□□□□□ -0.64
RPE-201ENST00000354506 SLIT2O94813 1529 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 PDE8BO95263 885 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 BMP6P22004 513 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 FANCCQ00597 558 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 KARSQ15046 597 aaKnown RBP11.06□□□□□ -0.64
RPE-201ENST00000354506 KRT222Q8N1A0 295 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 CARD6Q9BX69 1037 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
RPE-201ENST00000354506 CHD4Q14839 1912 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 STK36Q9NRP7 1315 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 LIFRP42702 1097 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 SYKP43405 635 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 METAP2P50579 478 aaKnown RBP eCLIP11.06□□□□□ -0.64
RPE-201ENST00000354506 NT5DC1Q5TFE4 455 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 METTL16Q86W50 562 aaKnown RBP11.06□□□□□ -0.64
RPE-201ENST00000354506 PIGBQ92521 554 aa11.06□□□□□ -0.64
RPE-201ENST00000354506 NUP98P52948 1817 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 FANCGO15287 622 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 MYO1BO43795 1136 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 CDKL5O76039 1030 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 ADKP55263 362 aaKnown RBP11.05□□□□□ -0.64
RPE-201ENST00000354506 CTSWP56202 376 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 TRIM65Q6PJ69 517 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 TMEM139Q8IV31 216 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 ZNF397Q8NF99 534 aaPredicted RBP11.05□□□□□ -0.64
RPE-201ENST00000354506 ZKSCAN3Q9BRR0 538 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 ASAP1Q9ULH1 1129 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 ZNF532Q9HCE3 1301 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 CLCN6P51797 869 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 LONRF3Q496Y0 759 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 RRP12Q5JTH9 1297 aaKnown RBP11.05□□□□□ -0.64
RPE-201ENST00000354506 METTL24Q5JXM2 366 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 TEX35Q5T0J7 233 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 LDHAL6AQ6ZMR3 332 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 DNAJC10Q8IXB1 793 aa11.05□□□□□ -0.64
RPE-201ENST00000354506 A0A0U1RQJ8 604 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 hCG_1642624A0A1W2PR95 340 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 PDE6AP16499 860 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 CASP1P29466 404 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 SARSP49591 514 aaKnown RBP11.04□□□□□ -0.64
RPE-201ENST00000354506 TOB1P50616 345 aaPredicted RBP11.04□□□□□ -0.64
RPE-201ENST00000354506 TERF2Q15554 542 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 CCDC102BQ68D86 513 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 HELBQ8NG08 1087 aaPredicted RBP11.04□□□□□ -0.64
RPE-201ENST00000354506 ATRIPQ8WXE1 791 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 PATL2C9JE40 543 aaKnown RBP11.04□□□□□ -0.64
RPE-201ENST00000354506 CUTAO60888 179 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 KIF20AO95235 890 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 H2AFXP16104 143 aaPredicted RBP11.04□□□□□ -0.64
RPE-201ENST00000354506 GPTP24298 496 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 TBX2Q13207 712 aaPredicted RBP11.04□□□□□ -0.64
RPE-201ENST00000354506 KLHL10Q6JEL2 608 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 KIF6Q6ZMV9 814 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 SLC4A9Q96Q91 983 aa11.04□□□□□ -0.64
RPE-201ENST00000354506 EPB41L4AQ9HCS5 686 aaPredicted RBP11.04□□□□□ -0.64
RPE-201ENST00000354506 PRDM11Q9NQV5 511 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms