RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 SHC4Q6S5L8 630 aa27.95■■■□□ 2.06
PTPA-202ENST00000347048 CBFA2T2O43439 604 aa27.94■■■□□ 2.06
PTPA-202ENST00000347048 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.94■■■□□ 2.06
PTPA-202ENST00000347048 SLC5A1P13866 664 aa27.93■■■□□ 2.06
PTPA-202ENST00000347048 MAP3K12Q12852 859 aa27.93■■■□□ 2.06
PTPA-202ENST00000347048 KRT23Q9C075 422 aa27.93■■■□□ 2.06
PTPA-202ENST00000347048 FANCCQ00597 558 aa27.93■■■□□ 2.06
PTPA-202ENST00000347048 SSRP1Q08945 709 aaKnown RBP27.93■■■□□ 2.06
PTPA-202ENST00000347048 ARMCX5Q6P1M9 558 aa27.93■■■□□ 2.06
PTPA-202ENST00000347048 PHKBQ93100 1093 aa27.93■■■□□ 2.06
PTPA-202ENST00000347048 MTA3Q9BTC8 594 aa27.93■■■□□ 2.06
PTPA-202ENST00000347048 NAPBQ9H115 298 aa27.93■■■□□ 2.06
PTPA-202ENST00000347048 SLC12A7Q9Y666 1083 aa27.93■■■□□ 2.06
PTPA-202ENST00000347048 UBN2Q6ZU65 1347 aa27.92■■■□□ 2.06
PTPA-202ENST00000347048 CHD4Q14839 1912 aa27.92■■■□□ 2.06
PTPA-202ENST00000347048 FMNL1O95466 1100 aaPredicted RBP27.92■■■□□ 2.06
PTPA-202ENST00000347048 IFNL3Q8IZI9 196 aa27.92■■■□□ 2.06
PTPA-202ENST00000347048 SPATA5Q8NB90 893 aa27.92■■■□□ 2.06
PTPA-202ENST00000347048 FAM217BQ9NTX9 383 aaPredicted RBP27.92■■■□□ 2.06
PTPA-202ENST00000347048 CCP110O43303 1012 aa27.91■■■□□ 2.06
PTPA-202ENST00000347048 RANBP6O60518 1105 aaKnown RBP27.91■■■□□ 2.06
PTPA-202ENST00000347048 IL6STP40189 918 aaPredicted RBP27.91■■■□□ 2.06
PTPA-202ENST00000347048 CBX1P83916 185 aa27.91■■■□□ 2.06
PTPA-202ENST00000347048 MYL5Q02045 173 aa27.91■■■□□ 2.06
PTPA-202ENST00000347048 UTP14CQ5TAP6 766 aaKnown RBP27.91■■■□□ 2.06
PTPA-202ENST00000347048 NKX2-3Q8TAU0 364 aa27.91■■■□□ 2.06
PTPA-202ENST00000347048 ERO1AQ96HE7 468 aa27.91■■■□□ 2.06
PTPA-202ENST00000347048 TRMT1Q9NXH9 659 aaKnown RBP27.91■■■□□ 2.06
PTPA-202ENST00000347048 GNAT2P19087 354 aa27.91■■■□□ 2.06
PTPA-202ENST00000347048 HSPA1LP34931 641 aa27.91■■■□□ 2.06
PTPA-202ENST00000347048 ZNF34Q8IZ26 560 aa27.91■■■□□ 2.06
PTPA-202ENST00000347048 SENP2Q9HC62 589 aa27.91■■■□□ 2.06
PTPA-202ENST00000347048 IFNAR1P17181 557 aa27.9■■■□□ 2.06
PTPA-202ENST00000347048 RXRAP19793 462 aa27.9■■■□□ 2.06
PTPA-202ENST00000347048 ZBTB1Q9Y2K1 713 aa27.9■■■□□ 2.06
PTPA-202ENST00000347048 DISP2A7MBM2 1401 aa27.9■■■□□ 2.06
PTPA-202ENST00000347048 IFIT3O14879 490 aaKnown RBP27.9■■■□□ 2.06
PTPA-202ENST00000347048 AKNAD1Q5T1N1 836 aa27.9■■■□□ 2.06
PTPA-202ENST00000347048 E4F1Q66K89 784 aaPredicted RBP27.9■■■□□ 2.06
PTPA-202ENST00000347048 OLFM4Q6UX06 510 aa27.9■■■□□ 2.06
PTPA-202ENST00000347048 EPB41L4AQ9HCS5 686 aaPredicted RBP27.9■■■□□ 2.06
PTPA-202ENST00000347048 HOOK1Q9UJC3 728 aaKnown RBP27.9■■■□□ 2.06
PTPA-202ENST00000347048 MBD4O95243 580 aa27.89■■■□□ 2.06
PTPA-202ENST00000347048 RCAN1P53805 252 aa27.89■■■□□ 2.06
PTPA-202ENST00000347048 OGFRQ9NZT2 677 aa27.89■■■□□ 2.06
PTPA-202ENST00000347048 ZSWIM5Q9P217 1185 aa27.89■■■□□ 2.06
PTPA-202ENST00000347048 SAFBQ15424 915 aaKnown RBP eCLIP27.88■■■□□ 2.05
PTPA-202ENST00000347048 KRBA2Q6ZNG9 492 aa27.88■■■□□ 2.05
PTPA-202ENST00000347048 DZIP3Q86Y13 1208 aaKnown RBP27.88■■■□□ 2.05
PTPA-202ENST00000347048 KRI1Q8N9T8 703 aaKnown RBP27.88■■■□□ 2.05
PTPA-202ENST00000347048 SLC4A9Q96Q91 983 aa27.88■■■□□ 2.05
PTPA-202ENST00000347048 SLC26A6Q9BXS9 759 aa27.88■■■□□ 2.05
PTPA-202ENST00000347048 HSD3B7Q9H2F3 369 aa27.88■■■□□ 2.05
PTPA-202ENST00000347048 LMOD1P29536 600 aaPredicted RBP27.88■■■□□ 2.05
PTPA-202ENST00000347048 NOSTRINQ8IVI9 506 aa27.88■■■□□ 2.05
PTPA-202ENST00000347048 MAGEB6Q8N7X4 407 aa27.88■■■□□ 2.05
PTPA-202ENST00000347048 PKNOX2Q96KN3 472 aa27.88■■■□□ 2.05
PTPA-202ENST00000347048 PPP1R13BQ96KQ4 1090 aa27.88■■■□□ 2.05
PTPA-202ENST00000347048 NOL10Q9BSC4 688 aaKnown RBP27.88■■■□□ 2.05
PTPA-202ENST00000347048 NACAP1Q9BZK3 213 aa27.88■■■□□ 2.05
PTPA-202ENST00000347048 PNPLA7Q6ZV29 1317 aa27.87■■■□□ 2.05
PTPA-202ENST00000347048 SLU7O95391 586 aaKnown RBP27.87■■■□□ 2.05
PTPA-202ENST00000347048 DMTNQ08495 405 aa27.87■■■□□ 2.05
PTPA-202ENST00000347048 SART3Q15020 963 aaKnown RBP27.87■■■□□ 2.05
PTPA-202ENST00000347048 MFSD6Q6ZSS7 791 aa27.87■■■□□ 2.05
PTPA-202ENST00000347048 STAG1Q8WVM7 1258 aa27.87■■■□□ 2.05
PTPA-202ENST00000347048 GTPBP4Q9BZE4 634 aaKnown RBP27.87■■■□□ 2.05
PTPA-202ENST00000347048 KCNH3Q9ULD8 1083 aa27.87■■■□□ 2.05
PTPA-202ENST00000347048 ZSCAN20P17040 1043 aaPredicted RBP27.86■■■□□ 2.05
PTPA-202ENST00000347048 TRIM22Q8IYM9 498 aa27.86■■■□□ 2.05
PTPA-202ENST00000347048 ZNF215Q9UL58 517 aaPredicted RBP27.86■■■□□ 2.05
PTPA-202ENST00000347048 MMP1P03956 469 aa27.86■■■□□ 2.05
PTPA-202ENST00000347048 PNOCQ13519 176 aa27.86■■■□□ 2.05
PTPA-202ENST00000347048 TMTC2Q8N394 836 aa27.86■■■□□ 2.05
PTPA-202ENST00000347048 CNNM3Q8NE01 707 aa27.86■■■□□ 2.05
PTPA-202ENST00000347048 ZNF397Q8NF99 534 aaPredicted RBP27.86■■■□□ 2.05
PTPA-202ENST00000347048 UBASH3AP57075 661 aa27.85■■■□□ 2.05
PTPA-202ENST00000347048 RASGRF1Q13972 1273 aa27.85■■■□□ 2.05
PTPA-202ENST00000347048 METTL16Q86W50 562 aaKnown RBP27.85■■■□□ 2.05
PTPA-202ENST00000347048 FOXP1Q9H334 677 aaPredicted RBP27.85■■■□□ 2.05
PTPA-202ENST00000347048 L2HGDHQ9H9P8 463 aa27.85■■■□□ 2.05
PTPA-202ENST00000347048 CCDC196A0A1B0GTZ2 297 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 GSG1L2A8MUP6 293 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 CTDSPL2Q05D32 466 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 CLIC6Q96NY7 704 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 PLCH1Q4KWH8 1693 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 SERPINC1P01008 464 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 RTN1Q16799 776 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 RILPL1Q5EBL4 403 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 MYL10Q9BUA6 226 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 ARMT1Q9H993 441 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 PRDM4Q9UKN5 801 aa27.84■■■□□ 2.05
PTPA-202ENST00000347048 RNF41Q9H4P4 317 aaPredicted RBP27.83■■■□□ 2.05
PTPA-202ENST00000347048 BCORQ6W2J9 1755 aa27.83■■■□□ 2.05
PTPA-202ENST00000347048 ATP1A3P13637 1013 aa27.82■■■□□ 2.04
PTPA-202ENST00000347048 WTAPQ15007 396 aa27.82■■■□□ 2.04
PTPA-202ENST00000347048 LONRF3Q496Y0 759 aa27.82■■■□□ 2.04
PTPA-202ENST00000347048 MPHOSPH8Q99549 860 aa27.82■■■□□ 2.04
PTPA-202ENST00000347048 ERICH2A1L162 156 aa27.82■■■□□ 2.04
PTPA-202ENST00000347048 SPDYE4A6NLX3 237 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms