RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 RNF214Q8ND24 703 aa16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 MTA3Q9BTC8 594 aa16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 FTOQ9C0B1 505 aaKnown RBP eCLIP16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 GJB4Q9NTQ9 266 aa16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 FAM217BQ9NTX9 383 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ERICH2A1L162 156 aa16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 HOXA10P31260 410 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 NTRK3Q16288 839 aa16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ATL3Q6DD88 541 aa16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CTR9Q6PD62 1173 aa16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 C15orf52Q6ZUT6 534 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ZNF804AQ7Z570 1209 aa16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 WDR66Q8TBY9 1149 aa16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ESR2Q92731 530 aa16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 PHKBQ93100 1093 aa16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ZNF396Q96N95 335 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 USP28Q96RU2 1077 aa16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP1-202ENST00000346416 PLSCR1O15162 318 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 BBOX1O75936 387 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 UFL1O94874 794 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CCDC173Q0VFZ6 552 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ZNF827Q17R98 1081 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 UBAC1Q9BSL1 405 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CRNKL1Q9BZJ0 848 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 RCOR1Q9UKL0 485 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 MAST2Q6P0Q8 1798 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 USP17L12C9JPN9 530 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 USP17L21D6R901 530 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 APBA3O96018 575 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 LDHBP07195 334 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 TMTC2Q8N394 836 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 AIFM3Q96NN9 605 aa16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 DCP1AQ9NPI6 582 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP1-202ENST00000346416 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 RANBP6O60518 1105 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ATP2B4P23634 1241 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 IARSP41252 1262 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 BICD2Q8TD16 824 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 PPP1R9BQ96SB3 815 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ALG1Q9BT22 464 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ATP8A2Q9NTI2 1148 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 DACT1Q9NYF0 836 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 GGA1Q9UJY5 639 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 MYH2Q9UKX2 1941 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 NID2Q14112 1375 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 RGS22Q8NE09 1264 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 CRAMP1Q96RY5 1269 aa16.45■□□□□ 0.22
CDK5RAP1-202ENST00000346416 PRDM1O75626 825 aa16.44■□□□□ 0.22
CDK5RAP1-202ENST00000346416 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP1-202ENST00000346416 FGRP09769 529 aa16.44■□□□□ 0.22
CDK5RAP1-202ENST00000346416 COL23A1Q86Y22 540 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP1-202ENST00000346416 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
CDK5RAP1-202ENST00000346416 NUP62CLQ9H1M0 184 aa16.44■□□□□ 0.22
CDK5RAP1-202ENST00000346416 TNKSO95271 1327 aa16.44■□□□□ 0.22
CDK5RAP1-202ENST00000346416 DUOX1Q9NRD9 1551 aa16.44■□□□□ 0.22
CDK5RAP1-202ENST00000346416 IGSF3O75054 1194 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 PCP11498 1178 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 SEC23AQ15436 765 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 BRAPQ7Z569 592 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 FUCA2Q9BTY2 467 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 CD209Q9NNX6 404 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 NR1I2O75469 434 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 IFNAR1P17181 557 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 KIF23Q02241 960 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 EVX2Q03828 476 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 GRIK5Q16478 980 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 CAMK4Q16566 473 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 RTN1Q16799 776 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ZNF654Q8IZM8 581 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 SLC26A6Q9BXS9 759 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 PODXL2Q9NZ53 605 aa16.43■□□□□ 0.22
CDK5RAP1-202ENST00000346416 KIF28PB7ZC32 967 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 SSRP1Q08945 709 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 KRT40Q6A162 431 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ZSCAN10Q96SZ4 725 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 DDX19AQ9NUU7 478 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 RTEL1Q9NZ71 1219 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 POLLQ9UGP5 575 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 STK36Q9NRP7 1315 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 KIAA1551Q9HCM1 1747 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 UBE2Q2LH0YL09 131 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 IL1R1P14778 569 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 RCAN1P53805 252 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 DIXDC1Q155Q3 683 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 MYSM1Q5VVJ2 828 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ENAHQ8N8S7 591 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 FANCBQ8NB91 859 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 TBC1D16Q8TBP0 767 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 NUP133Q8WUM0 1156 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 TRIM44Q96DX7 344 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ARPP21Q9UBL0 812 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 TAOK2Q9UL54 1235 aa16.42■□□□□ 0.22
CDK5RAP1-202ENST00000346416 FMNL1O95466 1100 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP1-202ENST00000346416 GSTO1P78417 241 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms