RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 CALM3P0DP25 149 aa17.46■□□□□ 0.39
SRPK1-201ENST00000346162 NAA30Q147X3 362 aaPredicted RBP17.46■□□□□ 0.39
SRPK1-201ENST00000346162 BRD3Q15059 726 aa17.46■□□□□ 0.39
SRPK1-201ENST00000346162 CCDC178Q5BJE1 867 aa17.46■□□□□ 0.39
SRPK1-201ENST00000346162 HECW2Q9P2P5 1572 aa17.46■□□□□ 0.39
SRPK1-201ENST00000346162 EXOC4Q96A65 974 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 CAPZA3Q96KX2 299 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 TRIM47Q96LD4 638 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 RMND1Q9NWS8 449 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 NRBP1Q9UHY1 535 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 CD2BP2O95400 341 aaKnown RBP17.45■□□□□ 0.38
SRPK1-201ENST00000346162 ME3Q16798 604 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 TDRD12Q587J7 1177 aaKnown RBP17.45■□□□□ 0.38
SRPK1-201ENST00000346162 MMS22LQ6ZRQ5 1243 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 CDC37L1Q7L3B6 337 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 LEO1Q8WVC0 666 aaPredicted RBP17.45■□□□□ 0.38
SRPK1-201ENST00000346162 ZKSCAN3Q9BRR0 538 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
SRPK1-201ENST00000346162 CLTCL1P53675 1640 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 MAP3K4Q9Y6R4 1608 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 ANKRD65E5RJM6 399 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 PDE8AO60658 829 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 PNMA6AP0CW24 399 aaPredicted RBP17.45■□□□□ 0.38
SRPK1-201ENST00000346162 PUM3Q15397 648 aaKnown RBP17.45■□□□□ 0.38
SRPK1-201ENST00000346162 CCDC6Q16204 474 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 LRRC8AQ8IWT6 810 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 JPH2Q9BR39 696 aaPredicted RBP17.45■□□□□ 0.38
SRPK1-201ENST00000346162 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
SRPK1-201ENST00000346162 ANGEL1Q9UNK9 670 aaKnown RBP17.45■□□□□ 0.38
SRPK1-201ENST00000346162 A0A0D9SFI3 127 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 ATP8B1O43520 1251 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 JAK2O60674 1132 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 CLCN6P51797 869 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 GOPCQ9HD26 462 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 MCM9Q9NXL9 1143 aa17.45■□□□□ 0.38
SRPK1-201ENST00000346162 FRMD3A2A2Y4 597 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 ANKRD62A6NC57 917 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 TUBB2AQ13885 445 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 UNC5CLQ8IV45 518 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 TUBB2BQ9BVA1 445 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 RTL9Q8NET4 1388 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 STAT6P42226 847 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 BCAS4Q8TDM0 211 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 TMEM87BQ96K49 555 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 NYXQ9GZU5 481 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 PDE11AQ9HCR9 933 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 A6NNZ2 444 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 SPAG1Q07617 926 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 NEDD9Q14511 834 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 TUBB8Q3ZCM7 444 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 HEATR3Q7Z4Q2 680 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 IMPACTQ9P2X3 320 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 OTUD7BQ6GQQ9 843 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 FBXO18Q8NFZ0 1043 aa17.44■□□□□ 0.38
SRPK1-201ENST00000346162 PROSER3Q2NL68 480 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 CUL5Q93034 780 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 GCOM1H8Y6P7 765 aaPredicted RBP17.43■□□□□ 0.38
SRPK1-201ENST00000346162 UNC13BO14795 1591 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 MYZAPP0CAP1 466 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 CALML3P27482 149 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 PARP10Q53GL7 1025 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 CTAGE1Q96RT6 745 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 CLSTN2Q9H4D0 955 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 CDK12Q9NYV4 1490 aaPredicted RBP17.43■□□□□ 0.38
SRPK1-201ENST00000346162 ODF2LQ9ULJ1 636 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 ST5P78524 1137 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 ARHGEF25Q86VW2 580 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 KRI1Q8N9T8 703 aaKnown RBP17.43■□□□□ 0.38
SRPK1-201ENST00000346162 BAIAP2L1Q9UHR4 511 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 ARHGAP31Q2M1Z3 1444 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 ZAP70P43403 619 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 FAM114A1Q8IWE2 563 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 FBF1Q8TES7 1133 aa17.43■□□□□ 0.38
SRPK1-201ENST00000346162 CCT5P48643 541 aa17.42■□□□□ 0.38
SRPK1-201ENST00000346162 CCDC40Q4G0X9 1142 aa17.42■□□□□ 0.38
SRPK1-201ENST00000346162 PNMA8AQ86V59 439 aaPredicted RBP17.42■□□□□ 0.38
SRPK1-201ENST00000346162 GUCA1BQ9UMX6 200 aa17.42■□□□□ 0.38
SRPK1-201ENST00000346162 CFAP58Q5T655 872 aa17.42■□□□□ 0.38
SRPK1-201ENST00000346162 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
SRPK1-201ENST00000346162 TCIRG1Q13488 830 aa17.42■□□□□ 0.38
SRPK1-201ENST00000346162 EXOC1Q9NV70 894 aa17.42■□□□□ 0.38
SRPK1-201ENST00000346162 FEZ2Q9UHY8 353 aaPredicted RBP17.42■□□□□ 0.38
SRPK1-201ENST00000346162 ERVV-2B6SEH9 535 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 ANO1Q5XXA6 986 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 VPS36Q86VN1 386 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 CACTINQ8WUQ7 758 aaKnown RBP17.41■□□□□ 0.38
SRPK1-201ENST00000346162 SPTLC3Q9NUV7 552 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 NSFL1CQ9UNZ2 370 aaKnown RBP17.41■□□□□ 0.38
SRPK1-201ENST00000346162 NLRP1Q9C000 1473 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 KRT2P35908 639 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 TNIP1Q15025 636 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 DSCC1Q9BVC3 393 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 ARMT1Q9H993 441 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 TOM1O60784 492 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 CABS1Q96KC9 395 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 C8orf37Q96NL8 207 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 GOLGA6BA6NDN3 693 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 KMT5BQ4FZB7 885 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms