RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 EXOSC10Q01780 885 aaKnown RBP19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 AKNAD1Q5T1N1 836 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 DHX32Q7L7V1 743 aaKnown RBP19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 NCOA7Q8NI08 942 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 USP40Q9NVE5 1235 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 ARPP21Q9UBL0 812 aaPredicted RBP19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 TACC3Q9Y6A5 838 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 DDX60LQ5H9U9 1706 aaKnown RBP19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 MYH1P12882 1939 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 YBX3P16989 372 aaKnown RBP eCLIP19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 LMNB1P20700 586 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 CDC42EP5Q6NZY7 148 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 MAPKAPK5Q8IW41 473 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 MB21D2Q8IYB1 491 aaPredicted RBP19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 STAG1Q8WVM7 1258 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 MCM9Q9NXL9 1143 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 PCDHAC2Q9Y5I4 1007 aa19.36■□□□□ 0.69
CEACAM1-202ENST00000344391 CYP2D7A0A087X1C5 515 aa19.35■□□□□ 0.69
CEACAM1-202ENST00000344391 RBM5P52756 815 aaKnown RBP eCLIP19.35■□□□□ 0.693e-7■■□□□ 14.5
CEACAM1-202ENST00000344391 TRDNQ13061 729 aa19.35■□□□□ 0.69
CEACAM1-202ENST00000344391 TCEANC2Q96MN5 208 aa19.35■□□□□ 0.69
CEACAM1-202ENST00000344391 HDAC9Q9UKV0 1011 aa19.35■□□□□ 0.69
CEACAM1-202ENST00000344391 FLT1P17948 1338 aa19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 SMIM22K7EJ46 135 aa19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 WDHD1O75717 1129 aaPredicted RBP19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 USP17L8P0C7I0 530 aa19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 EIF6P56537 245 aaKnown RBP19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 CFAP100Q494V2 611 aa19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 MFSD6Q6ZSS7 791 aa19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 RALYLQ86SE5 291 aaKnown RBP19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 RNF41Q9H4P4 317 aaPredicted RBP19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 INCENPQ9NQS7 918 aa19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 NEDD4P46934 1319 aa19.34■□□□□ 0.69
CEACAM1-202ENST00000344391 CYP2D6P10635 497 aa19.33■□□□□ 0.69
CEACAM1-202ENST00000344391 C12orf60Q5U649 245 aa19.33■□□□□ 0.69
CEACAM1-202ENST00000344391 OGFOD1Q8N543 542 aa19.33■□□□□ 0.69
CEACAM1-202ENST00000344391 CNNM2Q9H8M5 875 aa19.33■□□□□ 0.69
CEACAM1-202ENST00000344391 UTRNP46939 3433 aa19.33■□□□□ 0.68
CEACAM1-202ENST00000344391 FGRP09769 529 aa19.33■□□□□ 0.68
CEACAM1-202ENST00000344391 MCM5P33992 734 aa19.33■□□□□ 0.68
CEACAM1-202ENST00000344391 TOB2Q14106 344 aaPredicted RBP19.33■□□□□ 0.68
CEACAM1-202ENST00000344391 ANKRD1Q15327 319 aa19.33■□□□□ 0.68
CEACAM1-202ENST00000344391 NKX2-3Q8TAU0 364 aa19.33■□□□□ 0.68
CEACAM1-202ENST00000344391 TMX3Q96JJ7 454 aa19.33■□□□□ 0.68
CEACAM1-202ENST00000344391 KRT23Q9C075 422 aa19.33■□□□□ 0.68
CEACAM1-202ENST00000344391 WDR19Q8NEZ3 1342 aa19.32■□□□□ 0.68
CEACAM1-202ENST00000344391 RPS12P25398 132 aaKnown RBP19.32■□□□□ 0.68
CEACAM1-202ENST00000344391 MMP14P50281 582 aa19.32■□□□□ 0.68
CEACAM1-202ENST00000344391 EVX2Q03828 476 aa19.32■□□□□ 0.68
CEACAM1-202ENST00000344391 Q6ZUG5 572 aa19.32■□□□□ 0.68
CEACAM1-202ENST00000344391 NOL8Q76FK4 1167 aaKnown RBP19.32■□□□□ 0.68
CEACAM1-202ENST00000344391 PRMT6Q96LA8 375 aaPredicted RBP19.32■□□□□ 0.68
CEACAM1-202ENST00000344391 AGXT2Q9BYV1 514 aa19.32■□□□□ 0.68
CEACAM1-202ENST00000344391 DDX4Q9NQI0 724 aaKnown RBP19.32■□□□□ 0.68
CEACAM1-202ENST00000344391 LIMCH1Q9UPQ0 1083 aa19.32■□□□□ 0.68
CEACAM1-202ENST00000344391 B4E1Z4 1266 aa19.31■□□□□ 0.68
CEACAM1-202ENST00000344391 PCP11498 1178 aaKnown RBP19.31■□□□□ 0.68
CEACAM1-202ENST00000344391 ANTXR2P58335 489 aa19.31■□□□□ 0.68
CEACAM1-202ENST00000344391 CHST3Q7LGC8 479 aa19.31■□□□□ 0.68
CEACAM1-202ENST00000344391 AMOTL1Q8IY63 956 aa19.31■□□□□ 0.68
CEACAM1-202ENST00000344391 FBXL16Q8N461 479 aa19.31■□□□□ 0.68
CEACAM1-202ENST00000344391 MTMR14Q8NCE2 650 aa19.31■□□□□ 0.68
CEACAM1-202ENST00000344391 LRRC2Q9BYS8 371 aa19.31■□□□□ 0.68
CEACAM1-202ENST00000344391 SAP30BPQ9UHR5 308 aaKnown RBP19.31■□□□□ 0.68
CEACAM1-202ENST00000344391 ROBO3Q96MS0 1386 aa19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 PRC1O43663 620 aa19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 POLR3DP05423 398 aaPredicted RBP19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 SLC3A2P08195 630 aaKnown RBP19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 PICALMQ13492 652 aa19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 CYB5R4Q7L1T6 521 aa19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 STK11IPQ8N1F8 1099 aa19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 LARP6Q9BRS8 491 aaKnown RBP19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 IDI2Q9BXS1 227 aa19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 ZNF541Q9H0D2 1346 aa19.3■□□□□ 0.68
CEACAM1-202ENST00000344391 NPM3O75607 178 aaKnown RBP19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 PLCD1P51178 756 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 NFIAQ12857 509 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 DLGAP5Q15398 846 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 DPF2Q92785 391 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 TDRD3Q9H7E2 651 aaKnown RBP19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 ORC4O43929 436 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 KDM4AO75164 1064 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 ZNF280AP59817 542 aaPredicted RBP19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 CUL4AQ13619 759 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 SLC4A8Q2Y0W8 1093 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 SPRYD3Q8NCJ5 442 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 ZBED3Q96IU2 234 aaPredicted RBP19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 ZSCAN31Q96LW9 406 aaPredicted RBP19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 OSBPL5Q9H0X9 879 aaPredicted RBP19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 TOMM22Q9NS69 142 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 ZSWIM5Q9P217 1185 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 TPCN1Q9ULQ1 816 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 GJA3Q9Y6H8 435 aa19.29■□□□□ 0.68
CEACAM1-202ENST00000344391 GMPSP49915 693 aaPredicted RBP19.28■□□□□ 0.68
CEACAM1-202ENST00000344391 FGD1P98174 961 aa19.28■□□□□ 0.68
CEACAM1-202ENST00000344391 PDE4BQ07343 736 aa19.28■□□□□ 0.68
CEACAM1-202ENST00000344391 RRP12Q5JTH9 1297 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms