RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 AKNAD1Q5T1N1 836 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 MB21D2Q8IYB1 491 aaPredicted RBP16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 TEX11Q8IYF3 940 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 MTMR14Q8NCE2 650 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 SBF1O95248 1867 aa16.33■□□□□ 0.2
MS4A4A-202ENST00000343968 LMNB1P20700 586 aa16.33■□□□□ 0.2
MS4A4A-202ENST00000343968 RPS12P25398 132 aaKnown RBP16.33■□□□□ 0.2
MS4A4A-202ENST00000343968 ANKRD1Q15327 319 aa16.33■□□□□ 0.2
MS4A4A-202ENST00000343968 RNF41Q9H4P4 317 aaPredicted RBP16.33■□□□□ 0.2
MS4A4A-202ENST00000343968 CNNM2Q9H8M5 875 aa16.33■□□□□ 0.2
MS4A4A-202ENST00000343968 HDAC9Q9UKV0 1011 aa16.33■□□□□ 0.2
MS4A4A-202ENST00000343968 ADAMTSL1Q8N6G6 1762 aa16.33■□□□□ 0.2
MS4A4A-202ENST00000343968 ECM29Q5VYK3 1845 aa16.33■□□□□ 0.2
MS4A4A-202ENST00000343968 ROBO3Q96MS0 1386 aa16.33■□□□□ 0.2
MS4A4A-202ENST00000343968 USP17L12C9JPN9 530 aa16.32■□□□□ 0.2
MS4A4A-202ENST00000343968 USP17L21D6R901 530 aa16.32■□□□□ 0.2
MS4A4A-202ENST00000343968 CPA1P15085 419 aa16.32■□□□□ 0.2
MS4A4A-202ENST00000343968 AK2P54819 239 aa16.32■□□□□ 0.2
MS4A4A-202ENST00000343968 COL9A3Q14050 684 aaPredicted RBP16.32■□□□□ 0.2
MS4A4A-202ENST00000343968 GSE1Q14687 1217 aa16.32■□□□□ 0.2
MS4A4A-202ENST00000343968 CDC42EP5Q6NZY7 148 aa16.32■□□□□ 0.2
MS4A4A-202ENST00000343968 ARHGAP27Q6ZUM4 889 aa16.32■□□□□ 0.2
MS4A4A-202ENST00000343968 TGFBRAP1Q8WUH2 860 aa16.32■□□□□ 0.2
MS4A4A-202ENST00000343968 FLT1P17948 1338 aa16.32■□□□□ 0.2
MS4A4A-202ENST00000343968 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
MS4A4A-202ENST00000343968 EIF6P56537 245 aaKnown RBP16.31■□□□□ 0.2
MS4A4A-202ENST00000343968 TRDNQ13061 729 aa16.31■□□□□ 0.2
MS4A4A-202ENST00000343968 C12orf60Q5U649 245 aa16.31■□□□□ 0.2
MS4A4A-202ENST00000343968 MTA3Q9BTC8 594 aa16.31■□□□□ 0.2
MS4A4A-202ENST00000343968 IDI2Q9BXS1 227 aa16.31■□□□□ 0.2
MS4A4A-202ENST00000343968 KRT23Q9C075 422 aa16.31■□□□□ 0.2
MS4A4A-202ENST00000343968 USP40Q9NVE5 1235 aa16.31■□□□□ 0.2
MS4A4A-202ENST00000343968 TACC3Q9Y6A5 838 aa16.31■□□□□ 0.2
MS4A4A-202ENST00000343968 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 MCM5P33992 734 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 CTDSPL2Q05D32 466 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 CFAP100Q494V2 611 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 MFSD6Q6ZSS7 791 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 RALYLQ86SE5 291 aaKnown RBP16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 DPF2Q92785 391 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 MCM9Q9NXL9 1143 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 LIMCH1Q9UPQ0 1083 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 NEDD4P46934 1319 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 MINDY4BA8MYZ0 360 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 USP17L8P0C7I0 530 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 CUL4AQ13619 759 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 TOB2Q14106 344 aaPredicted RBP16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 OGFOD1Q8N543 542 aa16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 ZBED3Q96IU2 234 aaPredicted RBP16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 ZSCAN31Q96LW9 406 aaPredicted RBP16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
MS4A4A-202ENST00000343968 MYH1P12882 1939 aa16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 ORC4O43929 436 aa16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 ZNF280AP59817 542 aaPredicted RBP16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 MAPKAPK5Q8IW41 473 aa16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 AMOTL1Q8IY63 956 aa16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 TMX3Q96JJ7 454 aa16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
MS4A4A-202ENST00000343968 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
MS4A4A-202ENST00000343968 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
MS4A4A-202ENST00000343968 EVCP57679 992 aa16.28■□□□□ 0.2
MS4A4A-202ENST00000343968 ANTXR2P58335 489 aa16.28■□□□□ 0.2
MS4A4A-202ENST00000343968 Q6ZUG5 572 aa16.28■□□□□ 0.2
MS4A4A-202ENST00000343968 SH2B1Q9NRF2 756 aaPredicted RBP16.28■□□□□ 0.2
MS4A4A-202ENST00000343968 COL2A1P02458 1487 aaPredicted RBP16.28■□□□□ 0.2
MS4A4A-202ENST00000343968 CYP2D7A0A087X1C5 515 aa16.27■□□□□ 0.2
MS4A4A-202ENST00000343968 RBM5P52756 815 aaKnown RBP eCLIP16.27■□□□□ 0.2
MS4A4A-202ENST00000343968 TMEM87BQ96K49 555 aa16.27■□□□□ 0.2
MS4A4A-202ENST00000343968 PRMT6Q96LA8 375 aaPredicted RBP16.27■□□□□ 0.2
MS4A4A-202ENST00000343968 OSBPL5Q9H0X9 879 aaPredicted RBP16.27■□□□□ 0.2
MS4A4A-202ENST00000343968 DDX4Q9NQI0 724 aaKnown RBP16.27■□□□□ 0.2
MS4A4A-202ENST00000343968 PCDHAC2Q9Y5I4 1007 aa16.27■□□□□ 0.2
MS4A4A-202ENST00000343968 B4E1Z4 1266 aa16.27■□□□□ 0.19
MS4A4A-202ENST00000343968 PRC1O43663 620 aa16.27■□□□□ 0.19
MS4A4A-202ENST00000343968 PDE4BQ07343 736 aa16.27■□□□□ 0.19
MS4A4A-202ENST00000343968 DLGAP5Q15398 846 aa16.27■□□□□ 0.19
MS4A4A-202ENST00000343968 CYB5R4Q7L1T6 521 aa16.27■□□□□ 0.19
MS4A4A-202ENST00000343968 INTS4Q96HW7 963 aaKnown RBP16.27■□□□□ 0.19
MS4A4A-202ENST00000343968 TCEANC2Q96MN5 208 aa16.27■□□□□ 0.19
MS4A4A-202ENST00000343968 ZSWIM5Q9P217 1185 aa16.27■□□□□ 0.19
MS4A4A-202ENST00000343968 SMIM22K7EJ46 135 aa16.26■□□□□ 0.19
MS4A4A-202ENST00000343968 ENTPD3O75355 529 aa16.26■□□□□ 0.19
MS4A4A-202ENST00000343968 POLR3DP05423 398 aaPredicted RBP16.26■□□□□ 0.19
MS4A4A-202ENST00000343968 CYP2D6P10635 497 aa16.26■□□□□ 0.19
MS4A4A-202ENST00000343968 FKBP1CQ5VVH2 108 aa16.26■□□□□ 0.19
MS4A4A-202ENST00000343968 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
MS4A4A-202ENST00000343968 ESR2Q92731 530 aa16.26■□□□□ 0.19
MS4A4A-202ENST00000343968 INCENPQ9NQS7 918 aa16.26■□□□□ 0.19
MS4A4A-202ENST00000343968 TPCN1Q9ULQ1 816 aa16.26■□□□□ 0.19
MS4A4A-202ENST00000343968 ZNF541Q9H0D2 1346 aa16.25■□□□□ 0.19
MS4A4A-202ENST00000343968 PLCD1P51178 756 aa16.25■□□□□ 0.19
MS4A4A-202ENST00000343968 NFIAQ12857 509 aa16.25■□□□□ 0.19
MS4A4A-202ENST00000343968 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
MS4A4A-202ENST00000343968 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
MS4A4A-202ENST00000343968 DHX36Q9H2U1 1008 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms