RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 FLT1P17948 1338 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 USP17L12C9JPN9 530 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 USP17L21D6R901 530 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 HMGB1P09429 215 aaKnown RBP9.29□□□□□ -0.92
TMC1-202ENST00000340019 USP17L8P0C7I0 530 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 USP5P45974 858 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 BECN1Q14457 450 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 BLOC1S2Q6QNY1 142 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 STAG1Q8WVM7 1258 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 ALDH8A1Q9H2A2 487 aaPredicted RBP9.29□□□□□ -0.92
TMC1-202ENST00000340019 ZNF541Q9H0D2 1346 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 SMIM22K7EJ46 135 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 FGRP09769 529 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 RPS12P25398 132 aaKnown RBP9.29□□□□□ -0.92
TMC1-202ENST00000340019 MMP14P50281 582 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 EIF6P56537 245 aaKnown RBP9.29□□□□□ -0.92
TMC1-202ENST00000340019 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 CFAP100Q494V2 611 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 MTMR14Q8NCE2 650 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 USP40Q9NVE5 1235 aa9.29□□□□□ -0.92
TMC1-202ENST00000340019 CYP2D7A0A087X1C5 515 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 EXOSC10Q01780 885 aaKnown RBP9.28□□□□□ -0.92
TMC1-202ENST00000340019 EVX2Q03828 476 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 AKNAD1Q5T1N1 836 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 DHX32Q7L7V1 743 aaKnown RBP9.28□□□□□ -0.92
TMC1-202ENST00000340019 MAPKAPK5Q8IW41 473 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 HSCBQ8IWL3 235 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 MB21D2Q8IYB1 491 aaPredicted RBP9.28□□□□□ -0.92
TMC1-202ENST00000340019 OGFOD1Q8N543 542 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 NKX2-3Q8TAU0 364 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 PRMT6Q96LA8 375 aaPredicted RBP9.28□□□□□ -0.92
TMC1-202ENST00000340019 MCM9Q9NXL9 1143 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 HDAC9Q9UKV0 1011 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 ROBO3Q96MS0 1386 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 NEDD4P46934 1319 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 SPDYE2BA6NHP3 402 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 MINDY4BA8MYZ0 360 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 K7ELQ4 463 aaPredicted RBP9.28□□□□□ -0.92
TMC1-202ENST00000340019 SPDYE6P0CI01 402 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 MCM2P49736 904 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 AK2P54819 239 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 ZNF280AP59817 542 aaPredicted RBP9.28□□□□□ -0.92
TMC1-202ENST00000340019 C12orf60Q5U649 245 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 NCOA7Q8NI08 942 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 DPF2Q92785 391 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 ZBED3Q96IU2 234 aaPredicted RBP9.28□□□□□ -0.92
TMC1-202ENST00000340019 DDX4Q9NQI0 724 aaKnown RBP9.28□□□□□ -0.92
TMC1-202ENST00000340019 PDRG1Q9NUG6 133 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 NPM3O75607 178 aaKnown RBP9.28□□□□□ -0.92
TMC1-202ENST00000340019 CYP2D6P10635 497 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 RBM5P52756 815 aaKnown RBP eCLIP9.28□□□□□ -0.92
TMC1-202ENST00000340019 FBXL16Q8N461 479 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 IDI2Q9BXS1 227 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 AGXT2Q9BYV1 514 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 INCENPQ9NQS7 918 aa9.28□□□□□ -0.92
TMC1-202ENST00000340019 PCP11498 1178 aaKnown RBP9.27□□□□□ -0.93
TMC1-202ENST00000340019 SLC4A3P48751 1232 aa9.27□□□□□ -0.93
TMC1-202ENST00000340019 NFIAQ12857 509 aa9.27□□□□□ -0.93
TMC1-202ENST00000340019 MFSD6Q6ZSS7 791 aa9.27□□□□□ -0.93
TMC1-202ENST00000340019 RNF41Q9H4P4 317 aaPredicted RBP9.27□□□□□ -0.93
TMC1-202ENST00000340019 WDR19Q8NEZ3 1342 aa9.27□□□□□ -0.93
TMC1-202ENST00000340019 SHTN1A0MZ66 631 aa9.27□□□□□ -0.93
TMC1-202ENST00000340019 GMPSP49915 693 aaPredicted RBP9.27□□□□□ -0.93
TMC1-202ENST00000340019 PLCD1P51178 756 aa9.27□□□□□ -0.93
TMC1-202ENST00000340019 TOB2Q14106 344 aaPredicted RBP9.27□□□□□ -0.93
TMC1-202ENST00000340019 TCEANC2Q96MN5 208 aa9.27□□□□□ -0.93
TMC1-202ENST00000340019 CNNM2Q9H8M5 875 aa9.27□□□□□ -0.93
TMC1-202ENST00000340019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.27□□□□□ -0.93
TMC1-202ENST00000340019 SIPA1L1O43166 1804 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 ANTXR2P58335 489 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 TRDNQ13061 729 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 GPC2Q8N158 579 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 OSBPL5Q9H0X9 879 aaPredicted RBP9.26□□□□□ -0.93
TMC1-202ENST00000340019 TDRD3Q9H7E2 651 aaKnown RBP9.26□□□□□ -0.93
TMC1-202ENST00000340019 MYOZ2Q9NPC6 264 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 FAM198AQ9UFP1 575 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 B4E1Z4 1266 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 MCM5P33992 734 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 PICALMQ13492 652 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 DLGAP5Q15398 846 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 CYB5R4Q7L1T6 521 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 RALYLQ86SE5 291 aaKnown RBP9.26□□□□□ -0.93
TMC1-202ENST00000340019 KRT23Q9C075 422 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 RNF181Q9P0P0 153 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 SAP30BPQ9UHR5 308 aaKnown RBP9.26□□□□□ -0.93
TMC1-202ENST00000340019 GJA3Q9Y6H8 435 aa9.26□□□□□ -0.93
TMC1-202ENST00000340019 ORC4O43929 436 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 GPR162Q16538 588 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 SPDYE2Q495Y8 402 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 Q6ZUG5 572 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 CHST3Q7LGC8 479 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 TMX3Q96JJ7 454 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 ZSWIM5Q9P217 1185 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 COL2A1P02458 1487 aaPredicted RBP9.25□□□□□ -0.93
TMC1-202ENST00000340019 WNT10BO00744 389 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 GRIN3BO60391 1043 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 POLR3DP05423 398 aaPredicted RBP9.25□□□□□ -0.93
TMC1-202ENST00000340019 CACNB3P54284 484 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 ANKRD1Q15327 319 aa9.25□□□□□ -0.93
TMC1-202ENST00000340019 C9orf131Q5VYM1 1079 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms