RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CCDC186Q7Z3E2 898 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 ENGASEQ8NFI3 743 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 GRAPLQ8TC17 118 aaPredicted RBP18.99■□□□□ 0.63
LITAF-201ENST00000339430 KIAA1524Q8TCG1 905 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 INCENPQ9NQS7 918 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 QSER1Q2KHR3 1735 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 FBXO18Q8NFZ0 1043 aa18.98■□□□□ 0.63
LITAF-201ENST00000339430 ZNF512BQ96KM6 892 aaPredicted RBP18.98■□□□□ 0.63
LITAF-201ENST00000339430 BRIP1Q9BX63 1249 aa18.98■□□□□ 0.63
LITAF-201ENST00000339430 SPTLC3Q9NUV7 552 aa18.98■□□□□ 0.63
LITAF-201ENST00000339430 NRXN2Q9P2S2 1712 aa18.98■□□□□ 0.63
LITAF-201ENST00000339430 B4E1Z4 1266 aa18.98■□□□□ 0.63
LITAF-201ENST00000339430 SF3A1Q15459 793 aaKnown RBP18.98■□□□□ 0.63
LITAF-201ENST00000339430 PLA2G4DQ86XP0 818 aa18.98■□□□□ 0.63
LITAF-201ENST00000339430 CCDC144CPQ8IYA2 1237 aa18.98■□□□□ 0.63
LITAF-201ENST00000339430 AIFM3Q96NN9 605 aa18.98■□□□□ 0.63
LITAF-201ENST00000339430 SENP2Q9HC62 589 aa18.98■□□□□ 0.63
LITAF-201ENST00000339430 KLRG2A4D1S0 409 aaPredicted RBP18.97■□□□□ 0.63
LITAF-201ENST00000339430 KIF28PB7ZC32 967 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 TPM3P06753 285 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 ARID4AP29374 1257 aaPredicted RBP18.97■□□□□ 0.63
LITAF-201ENST00000339430 STK38Q15208 465 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 UBE3CQ15386 1083 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 STX1AQ16623 288 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 RBM17Q96I25 401 aaKnown RBP18.97■□□□□ 0.63
LITAF-201ENST00000339430 RTEL1Q9NZ71 1219 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 GOLGA6L19H0YKK7 550 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 CTAGE5O15320 804 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 LRMPQ12912 555 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 IQCB1Q15051 598 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 SLC51AQ86UW1 340 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 AIDAQ96BJ3 306 aa18.97■□□□□ 0.63
LITAF-201ENST00000339430 LINC00301Q8NCQ3 95 aa18.96■□□□□ 0.63
LITAF-201ENST00000339430 MRPS27Q92552 414 aaKnown RBP18.96■□□□□ 0.63
LITAF-201ENST00000339430 ANGEL1Q9UNK9 670 aaKnown RBP18.96■□□□□ 0.63
LITAF-201ENST00000339430 ANKRD31Q8N7Z5 1873 aa18.96■□□□□ 0.63
LITAF-201ENST00000339430 TCRBV5S4A2TA0A5A2 114 aa18.96■□□□□ 0.63
LITAF-201ENST00000339430 NDUFA8P51970 172 aa18.96■□□□□ 0.63
LITAF-201ENST00000339430 NEDD4P46934 1319 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 A0A1B0GUL6 1792 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 UQCRFS1P1P0C7P4 283 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 METAP2P50579 478 aaKnown RBP eCLIP18.95■□□□□ 0.62
LITAF-201ENST00000339430 MYSM1Q5VVJ2 828 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 MICU3Q86XE3 530 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 MAGEB6Q8N7X4 407 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 ARAP2Q8WZ64 1704 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 HOXA10P31260 410 aaPredicted RBP18.95■□□□□ 0.62
LITAF-201ENST00000339430 ADALQ6DHV7 355 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 FMR1NBQ8N0W7 255 aaPredicted RBP18.95■□□□□ 0.62
LITAF-201ENST00000339430 SPATA5Q8NB90 893 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 PHKBQ93100 1093 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 STRBPQ96SI9 672 aaKnown RBP18.95■□□□□ 0.62
LITAF-201ENST00000339430 ANKRD2Q9GZV1 360 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 CLIP2Q9UDT6 1046 aa18.95■□□□□ 0.62
LITAF-201ENST00000339430 SH2B2O14492 632 aaPredicted RBP18.94■□□□□ 0.62
LITAF-201ENST00000339430 BCAMP50895 628 aa18.94■□□□□ 0.62
LITAF-201ENST00000339430 RASGRF1Q13972 1273 aa18.94■□□□□ 0.62
LITAF-201ENST00000339430 UBE4AQ14139 1066 aa18.94■□□□□ 0.62
LITAF-201ENST00000339430 SDF4Q9BRK5 362 aa18.94■□□□□ 0.62
LITAF-201ENST00000339430 MYL10Q9BUA6 226 aa18.94■□□□□ 0.62
LITAF-201ENST00000339430 WDR19Q8NEZ3 1342 aa18.94■□□□□ 0.62
LITAF-201ENST00000339430 CDC27P30260 824 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 PDE6BP35913 854 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 KIF23Q02241 960 aaPredicted RBP18.93■□□□□ 0.62
LITAF-201ENST00000339430 CTDSPL2Q05D32 466 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 SYNE3Q6ZMZ3 975 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 ARMT1Q9H993 441 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 ZMYM6O95789 1325 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 BECN2A8MW95 431 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 DYNC1I1O14576 645 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 SPTLC2O15270 562 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 MBD4O95243 580 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 NFXL1Q6ZNB6 911 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 STK11IPQ8N1F8 1099 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 TSC1Q92574 1164 aa18.93■□□□□ 0.62
LITAF-201ENST00000339430 EPB41L4AQ9HCS5 686 aaPredicted RBP18.93■□□□□ 0.62
LITAF-201ENST00000339430 CAVIN2O95810 425 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 SRGNP10124 158 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 CCDC144BQ3MJ40 725 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 APOA5Q6Q788 366 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 MYRIPQ8NFW9 859 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 CRAMP1Q96RY5 1269 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 ALG1Q9BT22 464 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 ANKIB1Q9P2G1 1089 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 CHD4Q14839 1912 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 GYG1P46976 350 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 BRAPQ7Z569 592 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 KCNG4Q8TDN1 519 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 POLR3EQ9NVU0 708 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 ANO10Q9NW15 660 aa18.92■□□□□ 0.62
LITAF-201ENST00000339430 BBOX1O75936 387 aa18.91■□□□□ 0.62
LITAF-201ENST00000339430 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.91■□□□□ 0.62
LITAF-201ENST00000339430 DHX40Q8IX18 779 aaKnown RBP18.91■□□□□ 0.62
LITAF-201ENST00000339430 IFNL3Q8IZI9 196 aa18.91■□□□□ 0.62
LITAF-201ENST00000339430 NAPBQ9H115 298 aa18.91■□□□□ 0.62
LITAF-201ENST00000339430 ECM29Q5VYK3 1845 aa18.91■□□□□ 0.62
LITAF-201ENST00000339430 PRKAB2O43741 272 aa18.91■□□□□ 0.62
LITAF-201ENST00000339430 YEATS4O95619 227 aa18.91■□□□□ 0.62
LITAF-201ENST00000339430 KLRK1P26718 216 aa18.91■□□□□ 0.62
LITAF-201ENST00000339430 MARCKSP29966 332 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms