RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 USP28Q96RU2 1077 aa18.54■□□□□ 0.56
PGBD2-201ENST00000329291 BRIP1Q9BX63 1249 aa18.54■□□□□ 0.56
PGBD2-201ENST00000329291 TNS1Q9HBL0 1735 aaKnown RBP18.54■□□□□ 0.56
PGBD2-201ENST00000329291 RANBP6O60518 1105 aaKnown RBP18.53■□□□□ 0.56
PGBD2-201ENST00000329291 POTEAQ6S8J7 498 aa18.53■□□□□ 0.56
PGBD2-201ENST00000329291 BBOX1O75936 387 aa18.53■□□□□ 0.56
PGBD2-201ENST00000329291 HOXA10P31260 410 aaPredicted RBP18.53■□□□□ 0.56
PGBD2-201ENST00000329291 RCOR1Q9UKL0 485 aa18.53■□□□□ 0.56
PGBD2-201ENST00000329291 SLC12A7Q9Y666 1083 aa18.53■□□□□ 0.56
PGBD2-201ENST00000329291 RGPD3A6NKT7 1758 aaPredicted RBP18.52■□□□□ 0.56
PGBD2-201ENST00000329291 RGPD4Q7Z3J3 1758 aa18.52■□□□□ 0.56
PGBD2-201ENST00000329291 KLRG2A4D1S0 409 aaPredicted RBP18.52■□□□□ 0.56
PGBD2-201ENST00000329291 GOLGA8AA7E2F4 631 aa18.52■□□□□ 0.56
PGBD2-201ENST00000329291 USP17L12C9JPN9 530 aa18.52■□□□□ 0.56
PGBD2-201ENST00000329291 USP17L21D6R901 530 aa18.52■□□□□ 0.56
PGBD2-201ENST00000329291 ZBTB22O15209 634 aa18.52■□□□□ 0.56
PGBD2-201ENST00000329291 CRAMP1Q96RY5 1269 aa18.52■□□□□ 0.56
PGBD2-201ENST00000329291 CFAP45Q9UL16 551 aa18.52■□□□□ 0.56
PGBD2-201ENST00000329291 CCDC69A6NI79 296 aa18.52■□□□□ 0.55
PGBD2-201ENST00000329291 KIF28PB7ZC32 967 aa18.52■□□□□ 0.55
PGBD2-201ENST00000329291 PRDM1O75626 825 aa18.52■□□□□ 0.55
PGBD2-201ENST00000329291 POLR3DP05423 398 aaPredicted RBP18.52■□□□□ 0.55
PGBD2-201ENST00000329291 PPP1R9BQ96SB3 815 aa18.52■□□□□ 0.55
PGBD2-201ENST00000329291 RNF41Q9H4P4 317 aaPredicted RBP18.52■□□□□ 0.55
PGBD2-201ENST00000329291 DACT1Q9NYF0 836 aa18.52■□□□□ 0.55
PGBD2-201ENST00000329291 CAMK4Q16566 473 aa18.51■□□□□ 0.55
PGBD2-201ENST00000329291 FUCA2Q9BTY2 467 aa18.51■□□□□ 0.55
PGBD2-201ENST00000329291 DCP1AQ9NPI6 582 aaPredicted RBP18.51■□□□□ 0.55
PGBD2-201ENST00000329291 TAOK2Q9UL54 1235 aa18.51■□□□□ 0.55
PGBD2-201ENST00000329291 GOLGA6L4A6NEF3 574 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 UFL1O94874 794 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 LETM1O95202 739 aaPredicted RBP18.5■□□□□ 0.55
PGBD2-201ENST00000329291 CYP2D6P10635 497 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 WTAPQ15007 396 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 ZNF804AQ7Z570 1209 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 ALG1Q9BT22 464 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 POLLQ9UGP5 575 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 CHD4Q14839 1912 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 MYH13Q9UKX3 1938 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 NR1I2O75469 434 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 ATP2B4P23634 1241 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 SEC23AQ15436 765 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 C15orf52Q6ZUT6 534 aaKnown RBP18.5■□□□□ 0.55
PGBD2-201ENST00000329291 TMC4Q7Z404 712 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 CMTR1Q8N1G2 835 aaKnown RBP18.5■□□□□ 0.55
PGBD2-201ENST00000329291 PARP3Q9Y6F1 533 aa18.5■□□□□ 0.55
PGBD2-201ENST00000329291 FGRP09769 529 aa18.49■□□□□ 0.55
PGBD2-201ENST00000329291 DIXDC1Q155Q3 683 aa18.49■□□□□ 0.55
PGBD2-201ENST00000329291 GGA1Q9UJY5 639 aa18.49■□□□□ 0.55
PGBD2-201ENST00000329291 BAZ2AQ9UIF9 1905 aaKnown RBP18.49■□□□□ 0.55
PGBD2-201ENST00000329291 KIF23Q02241 960 aaPredicted RBP18.49■□□□□ 0.55
PGBD2-201ENST00000329291 TMED8Q6PL24 325 aaPredicted RBP18.49■□□□□ 0.55
PGBD2-201ENST00000329291 DZIP1Q86YF9 867 aaKnown RBP18.49■□□□□ 0.55
PGBD2-201ENST00000329291 ESR2Q92731 530 aa18.49■□□□□ 0.55
PGBD2-201ENST00000329291 CRNKL1Q9BZJ0 848 aaKnown RBP18.49■□□□□ 0.55
PGBD2-201ENST00000329291 LDHBP07195 334 aaKnown RBP18.48■□□□□ 0.55
PGBD2-201ENST00000329291 MMP10P09238 476 aa18.48■□□□□ 0.55
PGBD2-201ENST00000329291 GUCY1A2P33402 732 aa18.48■□□□□ 0.55
PGBD2-201ENST00000329291 IARSP41252 1262 aaKnown RBP18.48■□□□□ 0.55
PGBD2-201ENST00000329291 CCDC173Q0VFZ6 552 aa18.48■□□□□ 0.55
PGBD2-201ENST00000329291 SART3Q15020 963 aaKnown RBP18.48■□□□□ 0.55
PGBD2-201ENST00000329291 SPTY2D1Q68D10 685 aaPredicted RBP18.48■□□□□ 0.55
PGBD2-201ENST00000329291 WDR66Q8TBY9 1149 aa18.48■□□□□ 0.55
PGBD2-201ENST00000329291 ZNF396Q96N95 335 aaPredicted RBP18.48■□□□□ 0.55
PGBD2-201ENST00000329291 CD209Q9NNX6 404 aa18.48■□□□□ 0.55
PGBD2-201ENST00000329291 CLIC4Q9Y696 253 aa18.48■□□□□ 0.55
PGBD2-201ENST00000329291 TNKSO95271 1327 aa18.48■□□□□ 0.55
PGBD2-201ENST00000329291 CDKL5O76039 1030 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 SLC4A8Q2Y0W8 1093 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 KRT40Q6A162 431 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 CCDC82Q8N4S0 544 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 ENAHQ8N8S7 591 aaPredicted RBP18.47■□□□□ 0.55
PGBD2-201ENST00000329291 BICD2Q8TD16 824 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 FBXO41Q8TF61 875 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 UBAC1Q9BSL1 405 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 SLC26A6Q9BXS9 759 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 RRAGDQ9NQL2 400 aaPredicted RBP18.47■□□□□ 0.55
PGBD2-201ENST00000329291 NRXN2Q9P2S2 1712 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 PDE6BP35913 854 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 ATL3Q6DD88 541 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 SYNE3Q6ZMZ3 975 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 ZNF654Q8IZM8 581 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 TBC1D16Q8TBP0 767 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 NUP62CLQ9H1M0 184 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 GOLPH3LQ9H4A5 285 aa18.47■□□□□ 0.55
PGBD2-201ENST00000329291 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.47■□□□□ 0.55
PGBD2-201ENST00000329291 ERICH2A1L162 156 aa18.46■□□□□ 0.55
PGBD2-201ENST00000329291 PPEF1O14829 653 aaPredicted RBP18.46■□□□□ 0.55
PGBD2-201ENST00000329291 IGSF3O75054 1194 aa18.46■□□□□ 0.55
PGBD2-201ENST00000329291 USP17L8P0C7I0 530 aa18.46■□□□□ 0.55
PGBD2-201ENST00000329291 NBPF11Q86T75 865 aa18.46■□□□□ 0.55
PGBD2-201ENST00000329291 SH3RF3Q8TEJ3 882 aaPredicted RBP18.46■□□□□ 0.55
PGBD2-201ENST00000329291 NUP133Q8WUM0 1156 aa18.46■□□□□ 0.55
PGBD2-201ENST00000329291 ZSCAN10Q96SZ4 725 aaPredicted RBP18.46■□□□□ 0.55
PGBD2-201ENST00000329291 MTA3Q9BTC8 594 aa18.46■□□□□ 0.55
PGBD2-201ENST00000329291 ATP8A2Q9NTI2 1148 aa18.46■□□□□ 0.55
PGBD2-201ENST00000329291 PODXL2Q9NZ53 605 aa18.46■□□□□ 0.55
PGBD2-201ENST00000329291 RTEL1Q9NZ71 1219 aa18.46■□□□□ 0.55
PGBD2-201ENST00000329291 NID2Q14112 1375 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms