RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 VPS37DQ86XT2 251 aa18.33■□□□□ 0.53
SMARCD2-202ENST00000323347 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.53
SMARCD2-202ENST00000323347 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.33■□□□□ 0.53
SMARCD2-202ENST00000323347 FAM177BA6PVY3 158 aa18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 IFIT3O14879 490 aaKnown RBP18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 PTGS1P23219 599 aa18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 CCDC186Q7Z3E2 898 aa18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 CEP57L1Q8IYX8 460 aa18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 MYRIPQ8NFW9 859 aa18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 WASF1Q92558 559 aa18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 MAP3K14Q99558 947 aa18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 RNF41Q9H4P4 317 aaPredicted RBP18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 BSDC1Q9NW68 430 aaPredicted RBP18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 HPSEQ9Y251 543 aa18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 SLC12A7Q9Y666 1083 aa18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 SLC4A4Q9Y6R1 1079 aa18.33■□□□□ 0.52
SMARCD2-202ENST00000323347 CHD4Q14839 1912 aa18.32■□□□□ 0.52
SMARCD2-202ENST00000323347 A0A1B0GUL6 1792 aa18.32■□□□□ 0.52
SMARCD2-202ENST00000323347 PRKAB2O43741 272 aa18.32■□□□□ 0.52
SMARCD2-202ENST00000323347 GTF2F1P35269 517 aaKnown RBP eCLIP18.32■□□□□ 0.52
SMARCD2-202ENST00000323347 NFXL1Q6ZNB6 911 aa18.32■□□□□ 0.52
SMARCD2-202ENST00000323347 AIFM3Q96NN9 605 aa18.32■□□□□ 0.52
SMARCD2-202ENST00000323347 SDF4Q9BRK5 362 aa18.32■□□□□ 0.52
SMARCD2-202ENST00000323347 INCENPQ9NQS7 918 aa18.32■□□□□ 0.52
SMARCD2-202ENST00000323347 COL4A1P02462 1669 aa18.32■□□□□ 0.52
SMARCD2-202ENST00000323347 CCDC69A6NI79 296 aa18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 ZNF202O95125 648 aa18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 SSRP1Q08945 709 aaKnown RBP18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 MICU3Q86XE3 530 aa18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 JMYQ8N9B5 988 aa18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 GNL3LQ9NVN8 582 aaKnown RBP18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 CNTNAP4Q9C0A0 1308 aa18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 ECM29Q5VYK3 1845 aa18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 WDHD1O75717 1129 aaPredicted RBP18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 ANKRD18AQ8IVF6 992 aa18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 PHKBQ93100 1093 aa18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 LRP2BPQ9P2M1 347 aa18.31■□□□□ 0.52
SMARCD2-202ENST00000323347 TDO2P48775 406 aa18.3■□□□□ 0.52
SMARCD2-202ENST00000323347 SART3Q15020 963 aaKnown RBP18.3■□□□□ 0.52
SMARCD2-202ENST00000323347 PPP2R5BQ15173 497 aa18.3■□□□□ 0.52
SMARCD2-202ENST00000323347 ELOA2Q8IYF1 753 aaPredicted RBP18.3■□□□□ 0.52
SMARCD2-202ENST00000323347 C17orf53Q8N3J3 647 aaPredicted RBP18.3■□□□□ 0.52
SMARCD2-202ENST00000323347 CLIP2Q9UDT6 1046 aa18.3■□□□□ 0.52
SMARCD2-202ENST00000323347 PDS5AQ29RF7 1337 aaKnown RBP18.3■□□□□ 0.52
SMARCD2-202ENST00000323347 BECN2A8MW95 431 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 NEMFO60524 1076 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 PFKFB1P16118 471 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 RXRAP19793 462 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 TRIM29Q14134 588 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 ERFEQ4G0M1 354 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 NBPF11Q86T75 865 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 LINC00116Q8NCU8 138 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 NRBP1Q9UHY1 535 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 SEMA3EO15041 775 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 KCNQ2O43526 872 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 FGRP09769 529 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 CYP7A1P22680 504 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 NLRP12P59046 1061 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 PPARAQ07869 468 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 RC3H1Q5TC82 1133 aaKnown RBP18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 DRC7Q8IY82 874 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 RIOK1Q9BRS2 568 aaKnown RBP18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 TUBE1Q9UJT0 475 aa18.29■□□□□ 0.52
SMARCD2-202ENST00000323347 SCN7AQ01118 1682 aa18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 CCDC196A0A1B0GTZ2 297 aa18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 CUTAO60888 179 aa18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 SLC3A2P08195 630 aaKnown RBP18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 WTAPQ15007 396 aa18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 DNTTIP2Q5QJE6 756 aaKnown RBP18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 TMED8Q6PL24 325 aaPredicted RBP18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 MINPP1Q9UNW1 487 aa18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 MORC2Q9Y6X9 1032 aaPredicted RBP18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 CACNA1SQ13698 1873 aa18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 COL1A1P02452 1464 aaPredicted RBP18.28■□□□□ 0.52
SMARCD2-202ENST00000323347 PCP11498 1178 aaKnown RBP18.27■□□□□ 0.52
SMARCD2-202ENST00000323347 SEC23AQ15436 765 aa18.27■□□□□ 0.52
SMARCD2-202ENST00000323347 RTN1Q16799 776 aa18.27■□□□□ 0.52
SMARCD2-202ENST00000323347 RESP18Q5W5W9 173 aa18.27■□□□□ 0.52
SMARCD2-202ENST00000323347 C3orf67Q6ZVT6 689 aa18.27■□□□□ 0.52
SMARCD2-202ENST00000323347 FBXO33Q7Z6M2 555 aa18.27■□□□□ 0.52
SMARCD2-202ENST00000323347 ADGRA1Q86SQ6 560 aa18.27■□□□□ 0.52
SMARCD2-202ENST00000323347 BRIP1Q9BX63 1249 aa18.27■□□□□ 0.52
SMARCD2-202ENST00000323347 MAGEB6P1A0A0J9YX57 407 aa18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 MMP1P03956 469 aa18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 CCDC144BQ3MJ40 725 aa18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 SHC4Q6S5L8 630 aa18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 CCDC144CPQ8IYA2 1237 aa18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 CRACR2BQ8N4Y2 399 aaPredicted RBP18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 CACTINQ8WUQ7 758 aaKnown RBP18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 MYL10Q9BUA6 226 aa18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 SLC26A6Q9BXS9 759 aa18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 FOXP1Q9H334 677 aaPredicted RBP18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 PODXL2Q9NZ53 605 aa18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 MROH7-TTC4A0A0A0MT08 1334 aa18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 AFF2P51816 1311 aa18.27■□□□□ 0.51
SMARCD2-202ENST00000323347 ERICH2A1L162 156 aa18.26■□□□□ 0.51
SMARCD2-202ENST00000323347 DEXIO95424 95 aa18.26■□□□□ 0.51
SMARCD2-202ENST00000323347 NOSTRINQ8IVI9 506 aa18.26■□□□□ 0.51
SMARCD2-202ENST00000323347 AOPEPQ8N6M6 819 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms