RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 NEDD4P46934 1319 aa11.57□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CCP110O43303 1012 aa11.57□□□□□ -0.56
TNFRSF11B-201ENST00000297350 POLR3DP05423 398 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF11B-201ENST00000297350 IGHMBP2P38935 993 aaKnown RBP11.57□□□□□ -0.56
TNFRSF11B-201ENST00000297350 RBM10P98175 930 aaKnown RBP11.57□□□□□ -0.56
TNFRSF11B-201ENST00000297350 VPS72Q15906 364 aa11.57□□□□□ -0.56
TNFRSF11B-201ENST00000297350 NTRK3Q16288 839 aa11.57□□□□□ -0.56
TNFRSF11B-201ENST00000297350 MFSD6Q6ZSS7 791 aa11.57□□□□□ -0.56
TNFRSF11B-201ENST00000297350 WWC3Q9ULE0 1092 aa11.57□□□□□ -0.56
TNFRSF11B-201ENST00000297350 ZNF652Q9Y2D9 606 aa11.57□□□□□ -0.56
TNFRSF11B-201ENST00000297350 B4E1Z4 1266 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 KIF28PB7ZC32 967 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CBFA2T2O43439 604 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 IGSF3O75054 1194 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 SYKP43405 635 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 NT5C2P49902 561 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 PTPAQ15257 358 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 RESP18Q5W5W9 173 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CCDC94Q9BW85 323 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 A0A1B0GUL6 1792 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 ERICH2A1L162 156 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 UBAP1LF5GYI3 381 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 RIOK3O14730 519 aaKnown RBP11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 IFIT3O14879 490 aaKnown RBP11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 ZBTB22O15209 634 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 MBD4O95243 580 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 RASGRF1Q13972 1273 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 TPD52L1Q16890 204 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 SYNE4Q8N205 404 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 FOXP1Q9H334 677 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 NRBP1Q9UHY1 535 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 ANAPC4Q9UJX5 808 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CEP131Q9UPN4 1083 aa11.56□□□□□ -0.56
TNFRSF11B-201ENST00000297350 PIP4K2BP78356 416 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 LRMPQ12912 555 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CCDC144BQ3MJ40 725 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 RILPL1Q5EBL4 403 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 OTUD7BQ6GQQ9 843 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CCDC144CPQ8IYA2 1237 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 MAGEB6Q8N7X4 407 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 ANKRD7Q92527 254 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 SMARCC1Q92922 1105 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 MAP3K14Q99558 947 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 GNL3LQ9NVN8 582 aaKnown RBP11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 SKILP12757 684 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 TNNT1P13805 278 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 MICU3Q86XE3 530 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 NOSTRINQ8IVI9 506 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 FNBP4Q8N3X1 1017 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 ZNF579Q8NAF0 562 aaKnown RBP11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CCDC34Q96HJ3 373 aa11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 EPB41L4AQ9HCS5 686 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF11B-201ENST00000297350 SCN7AQ01118 1682 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 GSG1L2A8MUP6 293 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 DEXIO95424 95 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 DPCR1Q3MIW9 517 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CT47A1Q5JQC4 288 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 KANK3Q6NY19 840 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 INTS5Q6P9B9 1019 aaKnown RBP11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CLEC4GQ6UXB4 293 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 NYAP1Q6ZVC0 841 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 KRI1Q8N9T8 703 aaKnown RBP11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 MARCH10Q8NA82 808 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CCDC112Q8NEF3 446 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 DACH1Q9UI36 760 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 ZNF804BA4D1E1 1349 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 PDS5AQ29RF7 1337 aaKnown RBP11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 PSDA5PKW4 1024 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CAMTA2O94983 1202 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 BMP15O95972 392 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 MMP1P03956 469 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CDC27P30260 824 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 TDO2P48775 406 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CCZ1BP86790 482 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CCZ1P86791 482 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 WTAPQ15007 396 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 RTN1Q16799 776 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 SUSD4Q5VX71 490 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 OLFM4Q6UX06 510 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 FAM217BQ9NTX9 383 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 MROH7-TTC4A0A0A0MT08 1334 aa11.54□□□□□ -0.56
TNFRSF11B-201ENST00000297350 NUTM2BA6NNL0 878 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 NUTM2EB1AL46 878 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 SEMA3EO15041 775 aa11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 XBP1P17861 261 aa11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 MYL5Q02045 173 aa11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CEP135Q66GS9 1140 aa11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 NUTM2AQ8IVF1 878 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 PDCL2Q8N4E4 241 aa11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 TRIML1Q8N9V2 468 aa11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 MAST2Q6P0Q8 1798 aa11.53□□□□□ -0.56
TNFRSF11B-201ENST00000297350 RANBP6O60518 1105 aaKnown RBP11.52□□□□□ -0.56
TNFRSF11B-201ENST00000297350 WDHD1O75717 1129 aaPredicted RBP11.52□□□□□ -0.56
TNFRSF11B-201ENST00000297350 NTSR2O95665 410 aa11.52□□□□□ -0.56
TNFRSF11B-201ENST00000297350 CRKLP46109 303 aaKnown RBP11.52□□□□□ -0.56
TNFRSF11B-201ENST00000297350 PTPN14Q15678 1187 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms