RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CICQ96RK0 1608 aaPredicted RBP13.69□□□□□ -0.22
RHO-201ENST00000296271 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
RHO-201ENST00000296271 NOLC1Q14978 699 aaKnown RBP eCLIP13.69□□□□□ -0.22
RHO-201ENST00000296271 ADALQ6DHV7 355 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 SYNE3Q6ZMZ3 975 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 DRC7Q8IY82 874 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 SMARCC1Q92922 1105 aaPredicted RBP13.69□□□□□ -0.22
RHO-201ENST00000296271 SDF4Q9BRK5 362 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 CHD4Q14839 1912 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 CCDC69A6NI79 296 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 ZNF75DP51815 510 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 RBM10P98175 930 aaKnown RBP13.69□□□□□ -0.22
RHO-201ENST00000296271 PPARAQ07869 468 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 CHAF1AQ13111 956 aaPredicted RBP13.69□□□□□ -0.22
RHO-201ENST00000296271 TDRD7Q8NHU6 1098 aaKnown RBP13.69□□□□□ -0.22
RHO-201ENST00000296271 SHISA4Q96DD7 197 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 TMEM87BQ96K49 555 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 RREB1Q92766 1687 aa13.69□□□□□ -0.22
RHO-201ENST00000296271 ECM29Q5VYK3 1845 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 WDR19Q8NEZ3 1342 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 COL5A3P25940 1745 aaPredicted RBP13.68□□□□□ -0.22
RHO-201ENST00000296271 MAGEB6P1A0A0J9YX57 407 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 BTBD18B2RXH4 712 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 GRIN1Q05586 938 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 DPCR1Q3MIW9 517 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 DHX40Q8IX18 779 aaKnown RBP13.68□□□□□ -0.22
RHO-201ENST00000296271 PIBF1Q8WXW3 757 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 RIOK1Q9BRS2 568 aaKnown RBP13.68□□□□□ -0.22
RHO-201ENST00000296271 POLR3EQ9NVU0 708 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 ZNF804BA4D1E1 1349 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 CASZ1Q86V15 1759 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 NMT2O60551 498 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 PFKFB1P16118 471 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 ATP2B1P20020 1258 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 PRDX5P30044 214 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 SF3B3Q15393 1217 aaKnown RBP13.68□□□□□ -0.22
RHO-201ENST00000296271 DNTTIP2Q5QJE6 756 aaKnown RBP13.68□□□□□ -0.22
RHO-201ENST00000296271 SGMS1Q86VZ5 419 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 AOPEPQ8N6M6 819 aa13.68□□□□□ -0.22
RHO-201ENST00000296271 BSDC1Q9NW68 430 aaPredicted RBP13.68□□□□□ -0.22
RHO-201ENST00000296271 RTL9Q8NET4 1388 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 MYH2Q9UKX2 1941 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 UBAP1LF5GYI3 381 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 NR5A1Q13285 461 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 CLEC4GQ6UXB4 293 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 NBPF5PQ86XG9 351 aaPredicted RBP13.67□□□□□ -0.22
RHO-201ENST00000296271 PLA2G4DQ86XP0 818 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 OXER1Q8TDS5 423 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 FAM205CA6NFA0 338 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 ZNF202O95125 648 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 CYP2D6P10635 497 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 GNL2Q13823 731 aaKnown RBP13.67□□□□□ -0.22
RHO-201ENST00000296271 WTAPQ15007 396 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 SHC4Q6S5L8 630 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 STAG1Q8WVM7 1258 aa13.67□□□□□ -0.22
RHO-201ENST00000296271 ARHGEF1Q92888 912 aaKnown RBP13.67□□□□□ -0.22
RHO-201ENST00000296271 PNPLA7Q6ZV29 1317 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 LIFRP42702 1097 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 PTPAQ15257 358 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 STX1AQ16623 288 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 BRAPQ7Z569 592 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.66□□□□□ -0.22
RHO-201ENST00000296271 NACAP1Q9BZK3 213 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 AATFQ9NY61 560 aaKnown RBP eCLIP13.66□□□□□ -0.22
RHO-201ENST00000296271 CACNA1SQ13698 1873 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 RPS8P62241 208 aaKnown RBP13.66□□□□□ -0.22
RHO-201ENST00000296271 SSRP1Q08945 709 aaKnown RBP13.66□□□□□ -0.22
RHO-201ENST00000296271 KIAA1524Q8TCG1 905 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 MAP3K14Q99558 947 aa13.66□□□□□ -0.22
RHO-201ENST00000296271 CCNL1Q9UK58 526 aaPredicted RBP13.66□□□□□ -0.22
RHO-201ENST00000296271 UQCRHLA0A096LP55 91 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 FOXN1O15353 648 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 YEATS4O95619 227 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 UQCRHP07919 91 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 TOB1P50616 345 aaPredicted RBP13.65□□□□□ -0.22
RHO-201ENST00000296271 MECOMQ03112 1051 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 SLC39A14Q15043 492 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 GRIK5Q16478 980 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 RTN1Q16799 776 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 PTPN21Q16825 1174 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
RHO-201ENST00000296271 ATL3Q6DD88 541 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 NBPF11Q86T75 865 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 KCNG4Q8TDN1 519 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 TNKSO95271 1327 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 MYH13Q9UKX3 1938 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 USP17L12C9JPN9 530 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 USP17L21D6R901 530 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 TOM1O60784 492 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 UBE4AQ14139 1066 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 CAVIN4Q5BKX8 364 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 FAM47AQ5JRC9 791 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 ZNF654Q8IZM8 581 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 CACTINQ8WUQ7 758 aaKnown RBP13.65□□□□□ -0.22
RHO-201ENST00000296271 KRT23Q9C075 422 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 NARFQ9UHQ1 456 aa13.65□□□□□ -0.22
RHO-201ENST00000296271 LAMB2P55268 1798 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 A0A1W2PQ27 194 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms