RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 GPR108Q9NPR9 543 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.83■□□□□ 0.28
CCNF-201ENST00000293968 TUBE1Q9UJT0 475 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 CHD2O14647 1828 aaKnown RBP16.83■□□□□ 0.28
CCNF-201ENST00000293968 CUTAO60888 179 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 CTDSPL2Q05D32 466 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 C19orf44Q9H6X5 657 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 TBC1D2BQ9UPU7 963 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 NEDD4P46934 1319 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 SOWAHDA6NJG2 315 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 SASH3O75995 380 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 AK7Q96M32 723 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
CCNF-201ENST00000293968 A0A0G2JS52 829 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 GOLGA6L9A6NEM1 432 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 KDM6AO15550 1401 aaPredicted RBP16.82■□□□□ 0.28
CCNF-201ENST00000293968 RHOXF2BP0C7M4 288 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 KCNJ6P48051 423 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 GRIN1Q05586 938 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 FMR1Q06787 632 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCNF-201ENST00000293968 TXLNBQ8N3L3 684 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 GPR161Q8N6U8 529 aaKnown RBP16.82■□□□□ 0.28
CCNF-201ENST00000293968 RHOXF2Q9BQY4 288 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 TMEM51Q9NW97 253 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 MAN1B1Q9UKM7 699 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 KDM3BQ7LBC6 1761 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 N4BP2Q86UW6 1770 aaPredicted RBP16.82■□□□□ 0.28
CCNF-201ENST00000293968 RESP18Q5W5W9 173 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 DIS3L2Q8IYB7 885 aaKnown RBP16.82■□□□□ 0.28
CCNF-201ENST00000293968 TRIM22Q8IYM9 498 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 HELBQ8NG08 1087 aaPredicted RBP16.82■□□□□ 0.28
CCNF-201ENST00000293968 LTN1O94822 1766 aa16.82■□□□□ 0.28
CCNF-201ENST00000293968 KIF5CO60282 957 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 CCDC175P0C221 793 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 LRP10Q7Z4F1 713 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 CCDC191Q8NCU4 936 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCNF-201ENST00000293968 TRIM34Q9BYJ4 488 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 PHACTR2O75167 634 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 PPP6R2O75170 966 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 ZNF569Q5MCW4 686 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 NAPBQ9H115 298 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 FAM53CQ9NYF3 392 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 RAI14Q9P0K7 980 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 VPS18Q9P253 973 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 JAKMIP3Q5VZ66 844 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 SYNE4Q8N205 404 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 FOXP2O15409 715 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 NKX2-3Q8TAU0 364 aa16.81■□□□□ 0.28
CCNF-201ENST00000293968 ZRANB2O95218 330 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCNF-201ENST00000293968 TBC1D8O95759 1140 aa16.8■□□□□ 0.28
CCNF-201ENST00000293968 CHMP4BP1P59074 171 aa16.8■□□□□ 0.28
CCNF-201ENST00000293968 CCDC102AQ96A19 550 aa16.8■□□□□ 0.28
CCNF-201ENST00000293968 INTS13Q9NVM9 706 aa16.8■□□□□ 0.28
CCNF-201ENST00000293968 RGPD2P0DJD1 1756 aa16.8■□□□□ 0.28
CCNF-201ENST00000293968 GTF2E1P29083 439 aaPredicted RBP16.8■□□□□ 0.28
CCNF-201ENST00000293968 CASP1P29466 404 aa16.8■□□□□ 0.28
CCNF-201ENST00000293968 STAMQ92783 540 aa16.8■□□□□ 0.28
CCNF-201ENST00000293968 NFAT5O94916 1531 aa16.8■□□□□ 0.28
CCNF-201ENST00000293968 AKAP17AQ02040 695 aaKnown RBP16.8■□□□□ 0.28
CCNF-201ENST00000293968 PTPAQ15257 358 aa16.8■□□□□ 0.28
CCNF-201ENST00000293968 ZNF532Q9HCE3 1301 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 AKR1B15C9JRZ8 316 aaPredicted RBP16.79■□□□□ 0.28
CCNF-201ENST00000293968 SH2B2O14492 632 aaPredicted RBP16.79■□□□□ 0.28
CCNF-201ENST00000293968 SMYD4Q8IYR2 804 aaPredicted RBP16.79■□□□□ 0.28
CCNF-201ENST00000293968 IGSF22Q8N9C0 903 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 hCG_1642624A0A1W2PR95 340 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 ERICH2A1L162 156 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 STX10O60499 249 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 BMP6P22004 513 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 NR5A1Q13285 461 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 NUTM2AQ8IVF1 878 aaPredicted RBP16.79■□□□□ 0.28
CCNF-201ENST00000293968 NOSTRINQ8IVI9 506 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 TC2NQ8N9U0 490 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 MRPL44Q9H9J2 332 aaKnown RBP16.79■□□□□ 0.28
CCNF-201ENST00000293968 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 GUCY1A2P33402 732 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 LONRF2Q1L5Z9 754 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 C10orf67Q8IYJ2 551 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 HPSEQ9Y251 543 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 MRFAP1Q9Y605 127 aa16.79■□□□□ 0.28
CCNF-201ENST00000293968 MCAMP43121 646 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 TDO2P48775 406 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 ZSCAN26Q16670 478 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 WWC2Q6AWC2 1192 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 TEX33O43247 280 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 CCT6AP40227 531 aaKnown RBP16.78■□□□□ 0.28
CCNF-201ENST00000293968 TOM1L2Q6ZVM7 507 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 RANBP6O60518 1105 aaKnown RBP16.78■□□□□ 0.28
CCNF-201ENST00000293968 FCHSD1Q86WN1 690 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 MAP3K9P80192 1104 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 RAD51AP2Q09MP3 1159 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 FILIP1LQ4L180 1135 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 USP49Q70CQ1 688 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 PCDHB6Q9Y5E3 794 aa16.78■□□□□ 0.28
CCNF-201ENST00000293968 A0A0U1RQJ8 604 aa16.77■□□□□ 0.28
CCNF-201ENST00000293968 CIAO1O76071 339 aa16.77■□□□□ 0.28
CCNF-201ENST00000293968 LEKR1Q6ZMV7 388 aa16.77■□□□□ 0.28
CCNF-201ENST00000293968 ATRIPQ8WXE1 791 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms