RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 ADD2P35612 726 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 MCAMP43121 646 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 EXOSC10Q01780 885 aaKnown RBP8.8□□□□□ -1
TRIM42-201ENST00000286349 CCDC102BQ68D86 513 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 OLFM4Q6UX06 510 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 LARP6Q9BRS8 491 aaKnown RBP8.8□□□□□ -1
TRIM42-201ENST00000286349 KLHL33A6NCF5 533 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 PFKFB2O60825 505 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 TDO2P48775 406 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 GTF2A1P52655 376 aaPredicted RBP8.8□□□□□ -1
TRIM42-201ENST00000286349 ST3GAL1Q11201 340 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 ZRSR2Q15696 482 aaKnown RBP8.8□□□□□ -1
TRIM42-201ENST00000286349 LRSAM1Q6UWE0 723 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 USP48Q86UV5 1035 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 NECAB1Q8N987 351 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 C7orf43Q8WVR3 580 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 ZNF274Q96GC6 653 aaPredicted RBP8.8□□□□□ -1
TRIM42-201ENST00000286349 MASTLQ96GX5 879 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 CRAMP1Q96RY5 1269 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 SYT17Q9BSW7 474 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 MTA3Q9BTC8 594 aa8.8□□□□□ -1
TRIM42-201ENST00000286349 RPS8P62241 208 aaKnown RBP8.79□□□□□ -1
TRIM42-201ENST00000286349 KRT85P78386 507 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 GRAPQ13588 217 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 STYK1Q6J9G0 422 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 GRAPLQ8TC17 118 aaPredicted RBP8.79□□□□□ -1
TRIM42-201ENST00000286349 RPGRQ92834 1020 aaKnown RBP8.79□□□□□ -1
TRIM42-201ENST00000286349 RBM17Q96I25 401 aaKnown RBP8.79□□□□□ -1
TRIM42-201ENST00000286349 ZSCAN16Q9H4T2 348 aaPredicted RBP8.79□□□□□ -1
TRIM42-201ENST00000286349 MED4Q9NPJ6 270 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 WWC3Q9ULE0 1092 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 ZMYM6O95789 1325 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 VPS37CA5D8V6 355 aaPredicted RBP8.79□□□□□ -1
TRIM42-201ENST00000286349 ZNF213O14771 459 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 ERCC3P19447 782 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 NASPP49321 788 aaPredicted RBP8.79□□□□□ -1
TRIM42-201ENST00000286349 CCDC173Q0VFZ6 552 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 MAP3K12Q12852 859 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 SCARF1Q14162 830 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 GAS2L3Q86XJ1 694 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 BRF1Q92994 677 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 ANAPC4Q9UJX5 808 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 TAF6LQ9Y6J9 622 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 MYH7P12883 1935 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 KIAA1551Q9HCM1 1747 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 ELP1O95163 1332 aa8.79□□□□□ -1
TRIM42-201ENST00000286349 CTAGE5O15320 804 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 GPAA1O43292 621 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 DHX16O60231 1041 aaKnown RBP8.78□□□□□ -1
TRIM42-201ENST00000286349 EVCP57679 992 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 SLC9C2Q5TAH2 1124 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 STOX1Q6ZVD7 989 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 RALYLQ86SE5 291 aaKnown RBP8.78□□□□□ -1
TRIM42-201ENST00000286349 FAM184AQ8NB25 1140 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 SPATA5Q8NB90 893 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 NCOA7Q8NI08 942 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 SCAND2PQ9GZW5 306 aaPredicted RBP8.78□□□□□ -1
TRIM42-201ENST00000286349 CALCOCO1Q9P1Z2 691 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 KIF13BQ9NQT8 1826 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 SNAP23O00161 211 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 PPP1R12AO14974 1030 aaPredicted RBP8.78□□□□□ -1
TRIM42-201ENST00000286349 CHGBP05060 677 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 GNAT2P19087 354 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 MCM5P33992 734 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 TRDNQ13061 729 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 CCDC183Q5T5S1 534 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 SMARCC2Q8TAQ2 1214 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 TCEANC2Q96MN5 208 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 PUS7LQ9H0K6 701 aaKnown RBP8.78□□□□□ -1
TRIM42-201ENST00000286349 GNL3LQ9NVN8 582 aaKnown RBP8.78□□□□□ -1
TRIM42-201ENST00000286349 TMEM63CQ9P1W3 806 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 MINPP1Q9UNW1 487 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 CNPY2Q9Y2B0 182 aa8.78□□□□□ -1
TRIM42-201ENST00000286349 COL11A2P13942 1736 aaPredicted RBP8.77□□□□□ -1
TRIM42-201ENST00000286349 TAF1P21675 1872 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 AKAP11Q9UKA4 1901 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 BBOX1O75936 387 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 FGAP02671 866 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 ALDH1B1P30837 517 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 PHKA1P46020 1223 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 STK3Q13188 491 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 ALX1Q15699 326 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 ATL3Q6DD88 541 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 NAA16Q6N069 864 aaPredicted RBP8.77□□□□□ -1.01
TRIM42-201ENST00000286349 ANKRD18AQ8IVF6 992 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 CCDC97Q96F63 343 aaPredicted RBP8.77□□□□□ -1.01
TRIM42-201ENST00000286349 H3BQV1 296 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 IDH1O75874 414 aaKnown RBP8.77□□□□□ -1.01
TRIM42-201ENST00000286349 SCRN1Q12765 414 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 C1QTNF12Q5T7M4 302 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 IFFO2Q5TF58 517 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 HELBQ8NG08 1087 aaPredicted RBP8.77□□□□□ -1.01
TRIM42-201ENST00000286349 AIDAQ96BJ3 306 aa8.77□□□□□ -1.01
TRIM42-201ENST00000286349 ZNF219Q9P2Y4 722 aaPredicted RBP8.77□□□□□ -1.01
TRIM42-201ENST00000286349 NEFHP12036 1026 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 PDE6AP16499 860 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 LIG1P18858 919 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 UBE4AQ14139 1066 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 SWT1Q5T5J6 900 aaKnown RBP8.76□□□□□ -1.01
TRIM42-201ENST00000286349 TTLL6Q8N841 843 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms