RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 CNNM2Q9H8M5 875 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 ANAPC4Q9UJX5 808 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 ZDHHC9Q9Y397 364 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 ADAMTSL1Q8N6G6 1762 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 WDR33Q9C0J8 1336 aaKnown RBP18.11■□□□□ 0.49
COPS3-201ENST00000268717 PSME4Q14997 1843 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 PFKFB2O60825 505 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 RAD17O75943 681 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 LDHBP07195 334 aaKnown RBP18.11■□□□□ 0.49
COPS3-201ENST00000268717 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 POTEJP0CG39 1038 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 PRDX5P30044 214 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 EPHX2P34913 555 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 TDO2P48775 406 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 TBC1D10CQ8IV04 446 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 MIGA1Q8NAN2 632 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 BRF1Q92994 677 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 LARP6Q9BRS8 491 aaKnown RBP18.11■□□□□ 0.49
COPS3-201ENST00000268717 LLPHQ9BRT6 129 aaKnown RBP18.11■□□□□ 0.49
COPS3-201ENST00000268717 MTA3Q9BTC8 594 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 COA1Q9GZY4 146 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 FAM205AQ6ZU69 1335 aa18.11■□□□□ 0.49
COPS3-201ENST00000268717 ECE2O60344 883 aa18.1■□□□□ 0.49
COPS3-201ENST00000268717 TNIP1Q15025 636 aa18.1■□□□□ 0.49
COPS3-201ENST00000268717 STAG1Q8WVM7 1258 aa18.1■□□□□ 0.49
COPS3-201ENST00000268717 RNF41Q9H4P4 317 aaPredicted RBP18.1■□□□□ 0.49
COPS3-201ENST00000268717 GOLGA6L22H0YM25 854 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 PRC1O43663 620 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 PCP11498 1178 aaKnown RBP18.09■□□□□ 0.49
COPS3-201ENST00000268717 LMOD1P29536 600 aaPredicted RBP18.09■□□□□ 0.49
COPS3-201ENST00000268717 PKP1Q13835 747 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 DOK7Q18PE1 504 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 DZIP1Q86YF9 867 aaKnown RBP18.09■□□□□ 0.49
COPS3-201ENST00000268717 SUGT1Q9Y2Z0 365 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 PRKAB2O43741 272 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 BAG4O95429 457 aaKnown RBP18.09■□□□□ 0.49
COPS3-201ENST00000268717 PDCP20941 246 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 NT5C2P49902 561 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 AKNAD1Q5T1N1 836 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 TMEM87BQ96K49 555 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 CRNKL1Q9BZJ0 848 aaKnown RBP18.09■□□□□ 0.49
COPS3-201ENST00000268717 KRT23Q9C075 422 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 ATP8A2Q9NTI2 1148 aa18.09■□□□□ 0.49
COPS3-201ENST00000268717 LDHCP07864 332 aa18.08■□□□□ 0.48
COPS3-201ENST00000268717 GJB2P29033 226 aa18.08■□□□□ 0.48
COPS3-201ENST00000268717 EPS15P42566 896 aa18.08■□□□□ 0.48
COPS3-201ENST00000268717 ANTXR2P58335 489 aa18.08■□□□□ 0.48
COPS3-201ENST00000268717 EAPPQ56P03 285 aaPredicted RBP18.08■□□□□ 0.48
COPS3-201ENST00000268717 CHADLQ6NUI6 762 aa18.08■□□□□ 0.48
COPS3-201ENST00000268717 PNMA8AQ86V59 439 aaPredicted RBP18.08■□□□□ 0.48
COPS3-201ENST00000268717 LDHDQ86WU2 507 aa18.08■□□□□ 0.48
COPS3-201ENST00000268717 NECAB1Q8N987 351 aa18.08■□□□□ 0.48
COPS3-201ENST00000268717 GPRC5DQ9NZD1 345 aa18.08■□□□□ 0.48
COPS3-201ENST00000268717 PSMD14O00487 310 aa18.07■□□□□ 0.48
COPS3-201ENST00000268717 GMPSP49915 693 aaPredicted RBP18.07■□□□□ 0.48
COPS3-201ENST00000268717 PPP4CP60510 307 aa18.07■□□□□ 0.48
COPS3-201ENST00000268717 KCNQ5Q9NR82 932 aa18.07■□□□□ 0.48
COPS3-201ENST00000268717 JAG2Q9Y219 1238 aa18.07■□□□□ 0.48
COPS3-201ENST00000268717 G3V3G9 751 aa18.06■□□□□ 0.48
COPS3-201ENST00000268717 STX6O43752 255 aa18.06■□□□□ 0.48
COPS3-201ENST00000268717 SYT1P21579 422 aa18.06■□□□□ 0.48
COPS3-201ENST00000268717 PPARAQ07869 468 aa18.06■□□□□ 0.48
COPS3-201ENST00000268717 DCAF8Q5TAQ9 597 aa18.06■□□□□ 0.48
COPS3-201ENST00000268717 MFSD6Q6ZSS7 791 aa18.06■□□□□ 0.48
COPS3-201ENST00000268717 SLF2Q8IX21 1173 aa18.06■□□□□ 0.48
COPS3-201ENST00000268717 FAM163AQ96GL9 167 aaPredicted RBP18.06■□□□□ 0.48
COPS3-201ENST00000268717 LRRC2Q9BYS8 371 aa18.06■□□□□ 0.48
COPS3-201ENST00000268717 BAG3O95817 575 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 APLP1P51693 650 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 DYNLL1P63167 89 aaKnown RBP18.05■□□□□ 0.48
COPS3-201ENST00000268717 APOBRQ0VD83 1088 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 SMARCC2Q8TAQ2 1214 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 ANGEL1Q9UNK9 670 aaKnown RBP18.05■□□□□ 0.48
COPS3-201ENST00000268717 MROH7-TTC4A0A0A0MT08 1334 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 NEDD4P46934 1319 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 FGRP09769 529 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 ZSCAN22P10073 491 aaPredicted RBP18.05■□□□□ 0.48
COPS3-201ENST00000268717 PDIA3P30101 505 aaKnown RBP18.05■□□□□ 0.48
COPS3-201ENST00000268717 HMGN5P82970 282 aaKnown RBP18.05■□□□□ 0.48
COPS3-201ENST00000268717 SCRN1Q12765 414 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 SBK1Q52WX2 424 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 SDR42E1Q8WUS8 393 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 ARPP21Q9UBL0 812 aaPredicted RBP18.05■□□□□ 0.48
COPS3-201ENST00000268717 KIF3AQ9Y496 699 aa18.05■□□□□ 0.48
COPS3-201ENST00000268717 ZNF646O15015 1829 aaPredicted RBP18.04■□□□□ 0.48
COPS3-201ENST00000268717 SH2B2O14492 632 aaPredicted RBP18.04■□□□□ 0.48
COPS3-201ENST00000268717 LIFRP42702 1097 aa18.04■□□□□ 0.48
COPS3-201ENST00000268717 SKOR2Q2VWA4 1001 aaPredicted RBP18.04■□□□□ 0.48
COPS3-201ENST00000268717 USP50Q70EL3 339 aaPredicted RBP18.04■□□□□ 0.48
COPS3-201ENST00000268717 PODNQ7Z5L7 613 aa18.04■□□□□ 0.48
COPS3-201ENST00000268717 SGMS1Q86VZ5 419 aa18.04■□□□□ 0.48
COPS3-201ENST00000268717 ADARB2Q9NS39 739 aaKnown RBP18.04■□□□□ 0.48
COPS3-201ENST00000268717 AATFQ9NY61 560 aaKnown RBP eCLIP18.04■□□□□ 0.48
COPS3-201ENST00000268717 ZBTB12Q9Y330 459 aaPredicted RBP18.04■□□□□ 0.48
COPS3-201ENST00000268717 ATP6V1DQ9Y5K8 247 aa18.04■□□□□ 0.48
COPS3-201ENST00000268717 DHX16O60231 1041 aaKnown RBP18.03■□□□□ 0.48
COPS3-201ENST00000268717 STK3Q13188 491 aa18.03■□□□□ 0.48
COPS3-201ENST00000268717 DPF2Q92785 391 aa18.03■□□□□ 0.48
COPS3-201ENST00000268717 NOL10Q9BSC4 688 aaKnown RBP18.03■□□□□ 0.48
COPS3-201ENST00000268717 DCP1AQ9NPI6 582 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms