RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 ARHGAP45Q92619 1136 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 CALUO43852 315 aaPredicted RBP16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 FLOT1O75955 427 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 ATP2A2P16615 1042 aaKnown RBP16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 TMOD1P28289 359 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 SSFA2P28290 1259 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 TERF1P54274 439 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 CACYBPQ9HB71 228 aaKnown RBP16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 HELLSQ9NRZ9 838 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 ERFEQ4G0M1 354 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 MCF2L2Q86YR7 1114 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 ZBTB8OSQ8IWT0 167 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 DEPTORQ8TB45 409 aa16.09■□□□□ 0.17
ZC3H4-201ENST00000253048 CKAP4Q07065 602 aaKnown RBP16.08■□□□□ 0.17
ZC3H4-201ENST00000253048 TIGD1Q96MW7 591 aa16.08■□□□□ 0.17
ZC3H4-201ENST00000253048 RPS6KC1Q96S38 1066 aa16.08■□□□□ 0.17
ZC3H4-201ENST00000253048 ADPGKQ9BRR6 497 aa16.08■□□□□ 0.17
ZC3H4-201ENST00000253048 CCDC171Q6TFL3 1326 aa16.08■□□□□ 0.17
ZC3H4-201ENST00000253048 UNC5CLQ8IV45 518 aa16.08■□□□□ 0.17
ZC3H4-201ENST00000253048 C8orf58Q8NAV2 365 aa16.08■□□□□ 0.17
ZC3H4-201ENST00000253048 TMEM94Q12767 1356 aa16.08■□□□□ 0.16
ZC3H4-201ENST00000253048 HOXD10P28358 340 aa16.08■□□□□ 0.16
ZC3H4-201ENST00000253048 URI1O94763 535 aaPredicted RBP16.08■□□□□ 0.16
ZC3H4-201ENST00000253048 TMCO3Q6UWJ1 677 aa16.08■□□□□ 0.16
ZC3H4-201ENST00000253048 FAM204AQ9H8W3 233 aa16.08■□□□□ 0.16
ZC3H4-201ENST00000253048 SOS1Q07889 1333 aaPredicted RBP16.08■□□□□ 0.16
ZC3H4-201ENST00000253048 MAATS1Q7Z4T9 603 aa16.08■□□□□ 0.16
ZC3H4-201ENST00000253048 NECAB1Q8N987 351 aa16.08■□□□□ 0.16
ZC3H4-201ENST00000253048 CCDC77Q9BR77 488 aa16.08■□□□□ 0.16
ZC3H4-201ENST00000253048 USP14P54578 494 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 ZFYVE9O95405 1425 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 RAPGEF1Q13905 1077 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 SPATA5Q8NB90 893 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 RXRAP19793 462 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 PTPN14Q15678 1187 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 LIN9Q5TKA1 542 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 RETREG2Q8NC44 543 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 PIM2Q9P1W9 311 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 ZFYVE16Q7Z3T8 1539 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 FAM160B1Q5W0V3 765 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 LZTS2Q9BRK4 669 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 IGBP1P78318 339 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 CUL4BQ13620 913 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 TTLL7Q6ZT98 887 aa16.07■□□□□ 0.16
ZC3H4-201ENST00000253048 SERPINB2P05120 415 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 KIAA1841Q6NSI8 718 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 SHTN1A0MZ66 631 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 RNASELQ05823 741 aaKnown RBP16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 CERKLQ49MI3 558 aaPredicted RBP16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 ZNF594Q96JF6 807 aaPredicted RBP16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 CLRN2A0PK11 232 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 FAM182BQ5T319 152 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 MIER3Q7Z3K6 550 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 STIM2Q9P246 746 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 SESTD1Q86VW0 696 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 RTKN2Q8IZC4 609 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 PSMC4P43686 418 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 C6orf163Q5TEZ5 329 aa16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 MRPL50Q8N5N7 158 aaKnown RBP16.06■□□□□ 0.16
ZC3H4-201ENST00000253048 TCEANC2Q96MN5 208 aa16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 FTOQ9C0B1 505 aaKnown RBP eCLIP16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 IFRD2Q12894 506 aaPredicted RBP16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 GCKRQ14397 625 aa16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 PFDN4Q9NQP4 134 aa16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 PIK3C2GO75747 1445 aa16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 PLCD1P51178 756 aa16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 MAP7D1Q3KQU3 841 aa16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 SMC1BQ8NDV3 1235 aa16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 NPHP4O75161 1426 aaPredicted RBP16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 YWHAEP62258 255 aaKnown RBP16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 GEN1Q17RS7 908 aa16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 ZNF830Q96NB3 372 aaPredicted RBP16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 GSDMDP57764 484 aa16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 TMC4Q7Z404 712 aa16.05■□□□□ 0.16
ZC3H4-201ENST00000253048 CCDC129Q6ZRS4 1044 aa16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 ZSCAN20P17040 1043 aaPredicted RBP16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 APOBRQ0VD83 1088 aa16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 CIAPIN1Q6FI81 312 aa16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 LOC102724428A0A0B4J2F2 783 aa16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 SIK1P57059 783 aa16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 ZNF174Q15697 407 aa16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 GCNAQ96QF7 691 aa16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 PAIP2Q9BPZ3 127 aaKnown RBP16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 SERPINA10Q9UK55 444 aa16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 PNMA3Q9UL41 463 aa16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.04■□□□□ 0.16
ZC3H4-201ENST00000253048 PRDM1O75626 825 aa16.03■□□□□ 0.16
ZC3H4-201ENST00000253048 XRCC6P12956 609 aaKnown RBP eCLIP16.03■□□□□ 0.16
ZC3H4-201ENST00000253048 TTLL6Q8N841 843 aa16.03■□□□□ 0.16
ZC3H4-201ENST00000253048 RNF181Q9P0P0 153 aa16.03■□□□□ 0.16
ZC3H4-201ENST00000253048 ZHX1Q9UKY1 873 aaPredicted RBP16.03■□□□□ 0.16
ZC3H4-201ENST00000253048 TYW5A2RUC4 315 aaKnown RBP16.03■□□□□ 0.16
ZC3H4-201ENST00000253048 POLR2MP0CAP2 368 aa16.03■□□□□ 0.16
ZC3H4-201ENST00000253048 SDSP20132 328 aa16.03■□□□□ 0.16
ZC3H4-201ENST00000253048 TXKP42681 527 aa16.03■□□□□ 0.16
ZC3H4-201ENST00000253048 TBC1D9Q6ZT07 1266 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms