RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TMEM87BQ96K49 555 aa18.31■□□□□ 0.52
LRFN1-201ENST00000248668 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
LRFN1-201ENST00000248668 ISM2Q6H9L7 571 aa18.3■□□□□ 0.52
LRFN1-201ENST00000248668 ENGASEQ8NFI3 743 aa18.3■□□□□ 0.52
LRFN1-201ENST00000248668 PTGS1P23219 599 aa18.3■□□□□ 0.52
LRFN1-201ENST00000248668 SETDB2Q96T68 719 aa18.3■□□□□ 0.52
LRFN1-201ENST00000248668 LRP5O75197 1615 aa18.3■□□□□ 0.52
LRFN1-201ENST00000248668 MAGEB6P1A0A0J9YX57 407 aa18.3■□□□□ 0.52
LRFN1-201ENST00000248668 VGLL3A8MV65 326 aa18.3■□□□□ 0.52
LRFN1-201ENST00000248668 ALX1Q15699 326 aa18.3■□□□□ 0.52
LRFN1-201ENST00000248668 CAVIN4Q5BKX8 364 aa18.3■□□□□ 0.52
LRFN1-201ENST00000248668 KCNJ14Q9UNX9 436 aa18.3■□□□□ 0.52
LRFN1-201ENST00000248668 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
LRFN1-201ENST00000248668 ZPR1O75312 459 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 ANO1Q5XXA6 986 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 CLEC4GQ6UXB4 293 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 FAM84BQ96KN1 310 aaPredicted RBP18.29■□□□□ 0.52
LRFN1-201ENST00000248668 KCNF1Q9H3M0 494 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 WDR19Q8NEZ3 1342 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 LTBP4Q8N2S1 1624 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 hCG_1642624A0A1W2PR95 340 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 ATP2B1P20020 1258 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 PPARAQ07869 468 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 WTAPQ15007 396 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 GNL3LQ9NVN8 582 aaKnown RBP18.29■□□□□ 0.52
LRFN1-201ENST00000248668 PYCARDQ9ULZ3 195 aa18.29■□□□□ 0.52
LRFN1-201ENST00000248668 CDKL5O76039 1030 aa18.28■□□□□ 0.52
LRFN1-201ENST00000248668 NTRK3Q16288 839 aa18.28■□□□□ 0.52
LRFN1-201ENST00000248668 BSDC1Q9NW68 430 aaPredicted RBP18.28■□□□□ 0.52
LRFN1-201ENST00000248668 CCNL1Q9UK58 526 aaPredicted RBP18.28■□□□□ 0.52
LRFN1-201ENST00000248668 GOLGB1Q14789 3259 aaKnown RBP18.28■□□□□ 0.52
LRFN1-201ENST00000248668 ADALQ6DHV7 355 aa18.28■□□□□ 0.52
LRFN1-201ENST00000248668 COL1A1P02452 1464 aaPredicted RBP18.28■□□□□ 0.52
LRFN1-201ENST00000248668 GOLGA6L19H0YKK7 550 aa18.28■□□□□ 0.52
LRFN1-201ENST00000248668 TRIM29Q14134 588 aa18.28■□□□□ 0.52
LRFN1-201ENST00000248668 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
LRFN1-201ENST00000248668 FMR1NBQ8N0W7 255 aaPredicted RBP18.28■□□□□ 0.52
LRFN1-201ENST00000248668 KRT23Q9C075 422 aa18.28■□□□□ 0.52
LRFN1-201ENST00000248668 ERICH2A1L162 156 aa18.27■□□□□ 0.52
LRFN1-201ENST00000248668 WDHD1O75717 1129 aaPredicted RBP18.27■□□□□ 0.52
LRFN1-201ENST00000248668 ATL3Q6DD88 541 aa18.27■□□□□ 0.52
LRFN1-201ENST00000248668 CLIC6Q96NY7 704 aa18.27■□□□□ 0.52
LRFN1-201ENST00000248668 BECN2A8MW95 431 aa18.27■□□□□ 0.52
LRFN1-201ENST00000248668 SSRP1Q08945 709 aaKnown RBP18.27■□□□□ 0.52
LRFN1-201ENST00000248668 SF3B3Q15393 1217 aaKnown RBP18.27■□□□□ 0.52
LRFN1-201ENST00000248668 CCDC186Q7Z3E2 898 aa18.27■□□□□ 0.52
LRFN1-201ENST00000248668 KCNG4Q8TDN1 519 aa18.27■□□□□ 0.52
LRFN1-201ENST00000248668 NLRP3Q96P20 1036 aa18.27■□□□□ 0.52
LRFN1-201ENST00000248668 UBAC1Q9BSL1 405 aa18.27■□□□□ 0.52
LRFN1-201ENST00000248668 CNNM2Q9H8M5 875 aa18.27■□□□□ 0.52
LRFN1-201ENST00000248668 RPS8P62241 208 aaKnown RBP18.27■□□□□ 0.51
LRFN1-201ENST00000248668 LRMPQ12912 555 aa18.27■□□□□ 0.51
LRFN1-201ENST00000248668 STX1AQ16623 288 aa18.27■□□□□ 0.51
LRFN1-201ENST00000248668 SPECC1Q5M775 1068 aa18.27■□□□□ 0.51
LRFN1-201ENST00000248668 ZNF384Q8TF68 577 aa18.27■□□□□ 0.51
LRFN1-201ENST00000248668 POLR3EQ9NVU0 708 aa18.27■□□□□ 0.51
LRFN1-201ENST00000248668 SART3Q15020 963 aaKnown RBP18.26■□□□□ 0.51
LRFN1-201ENST00000248668 RTN1Q16799 776 aa18.26■□□□□ 0.51
LRFN1-201ENST00000248668 SGMS1Q86VZ5 419 aa18.26■□□□□ 0.51
LRFN1-201ENST00000248668 USP21Q9UK80 565 aa18.26■□□□□ 0.51
LRFN1-201ENST00000248668 MROH7-TTC4A0A0A0MT08 1334 aa18.26■□□□□ 0.51
LRFN1-201ENST00000248668 GNAT2P19087 354 aa18.26■□□□□ 0.51
LRFN1-201ENST00000248668 NOLC1Q14978 699 aaKnown RBP eCLIP18.26■□□□□ 0.51
LRFN1-201ENST00000248668 TXNRD3Q86VQ6 643 aa18.26■□□□□ 0.51
LRFN1-201ENST00000248668 STAG1Q8WVM7 1258 aa18.26■□□□□ 0.51
LRFN1-201ENST00000248668 PNPLA7Q6ZV29 1317 aa18.26■□□□□ 0.51
LRFN1-201ENST00000248668 RTL9Q8NET4 1388 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 BTBD18B2RXH4 712 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 UBE4AQ14139 1066 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 AATFQ9NY61 560 aaKnown RBP eCLIP18.25■□□□□ 0.51
LRFN1-201ENST00000248668 LIFRP42702 1097 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 ZNF75DP51815 510 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 VPS72Q15906 364 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 AOPEPQ8N6M6 819 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 TDRD7Q8NHU6 1098 aaKnown RBP18.25■□□□□ 0.51
LRFN1-201ENST00000248668 YEATS4O95619 227 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 PFKFB1P16118 471 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 PRDX5P30044 214 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 GPR101Q96P66 508 aaPredicted RBP18.25■□□□□ 0.51
LRFN1-201ENST00000248668 ZNF804BA4D1E1 1349 aa18.25■□□□□ 0.51
LRFN1-201ENST00000248668 BCL9LQ86UU0 1499 aa18.24■□□□□ 0.51
LRFN1-201ENST00000248668 CTAGE5O15320 804 aa18.24■□□□□ 0.51
LRFN1-201ENST00000248668 ZNF202O95125 648 aa18.24■□□□□ 0.51
LRFN1-201ENST00000248668 IQCB1Q15051 598 aa18.24■□□□□ 0.51
LRFN1-201ENST00000248668 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
LRFN1-201ENST00000248668 PIBF1Q8WXW3 757 aa18.24■□□□□ 0.51
LRFN1-201ENST00000248668 ARHGEF1Q92888 912 aaKnown RBP18.24■□□□□ 0.51
LRFN1-201ENST00000248668 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
LRFN1-201ENST00000248668 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
LRFN1-201ENST00000248668 TSC1Q92574 1164 aa18.24■□□□□ 0.51
LRFN1-201ENST00000248668 MYH15Q9Y2K3 1946 aa18.24■□□□□ 0.51
LRFN1-201ENST00000248668 TNKSO95271 1327 aa18.24■□□□□ 0.51
LRFN1-201ENST00000248668 BAZ2BQ9UIF8 2168 aaKnown RBP18.24■□□□□ 0.51
LRFN1-201ENST00000248668 AXDND1Q5T1B0 1012 aaPredicted RBP18.24■□□□□ 0.51
LRFN1-201ENST00000248668 ZNF654Q8IZM8 581 aa18.24■□□□□ 0.51
LRFN1-201ENST00000248668 RIOK1Q9BRS2 568 aaKnown RBP18.24■□□□□ 0.51
LRFN1-201ENST00000248668 GOLGA6L6A8MZA4 724 aa18.23■□□□□ 0.51
LRFN1-201ENST00000248668 RPS6KA4O75676 772 aa18.23■□□□□ 0.51
LRFN1-201ENST00000248668 DPCR1Q3MIW9 517 aa18.23■□□□□ 0.51
LRFN1-201ENST00000248668 CLIP2Q9UDT6 1046 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms