RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 SEC31AO94979 1220 aaKnown RBP12.81□□□□□ -0.36
NEFM-201ENST00000221166 NCAPHQ15003 741 aa12.81□□□□□ -0.36
NEFM-201ENST00000221166 HLFQ16534 295 aa12.81□□□□□ -0.36
NEFM-201ENST00000221166 RASSF8Q8NHQ8 419 aa12.81□□□□□ -0.36
NEFM-201ENST00000221166 WASF1Q92558 559 aa12.81□□□□□ -0.36
NEFM-201ENST00000221166 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.81□□□□□ -0.36
NEFM-201ENST00000221166 MED1Q15648 1581 aaPredicted RBP12.81□□□□□ -0.36
NEFM-201ENST00000221166 CLCN6P51797 869 aa12.81□□□□□ -0.36
NEFM-201ENST00000221166 IKBKBO14920 756 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 PRKAB2O43741 272 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 ZBTB38Q8NAP3 1195 aaPredicted RBP12.8□□□□□ -0.36
NEFM-201ENST00000221166 STAMQ92783 540 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 ATG3Q9NT62 314 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 ZSWIM5Q9P217 1185 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 DACH1Q9UI36 760 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 MTMR7Q9Y216 660 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 CCDC66A2RUB6 948 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 ERVV-2B6SEH9 535 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 COBLO75128 1261 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 PCCAP05165 728 aaPredicted RBP12.8□□□□□ -0.36
NEFM-201ENST00000221166 NR5A1Q13285 461 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 TMEM87BQ96K49 555 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 NEDD4P46934 1319 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 POSTNQ15063 836 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 RAI14Q9P0K7 980 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 PPP2R2CQ9Y2T4 447 aa12.8□□□□□ -0.36
NEFM-201ENST00000221166 NOSTRINQ8IVI9 506 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 KDM3BQ7LBC6 1761 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 GUCY1A2P33402 732 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 PDE4BQ07343 736 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 TERF2Q15554 542 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 METTL16Q86W50 562 aaKnown RBP12.79□□□□□ -0.36
NEFM-201ENST00000221166 IFNL3Q8IZI9 196 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 BPIFA3Q9BQP9 254 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 FOXP2O15409 715 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 RANBP6O60518 1105 aaKnown RBP12.79□□□□□ -0.36
NEFM-201ENST00000221166 SLC5A1P13866 664 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 GRIN1Q05586 938 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 VSTM4Q8IW00 320 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 NKX2-3Q8TAU0 364 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
NEFM-201ENST00000221166 ISCA1Q9BUE6 129 aa12.79□□□□□ -0.36
NEFM-201ENST00000221166 PPP6R2O75170 966 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 TTLL11Q8NHH1 800 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 SAMSN1Q9NSI8 373 aaKnown RBP12.78□□□□□ -0.36
NEFM-201ENST00000221166 PUF60Q9UHX1 559 aaKnown RBP12.78□□□□□ -0.36
NEFM-201ENST00000221166 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 ARHGAP6O43182 974 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 TPM1P09493 284 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 UQCRFS1P1P0C7P4 283 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 XBP1P17861 261 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 TIGD1Q96MW7 591 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 CASP1P29466 404 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 CTSWP56202 376 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 FILIP1LQ4L180 1135 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 MAN1B1Q9UKM7 699 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 TMEM94Q12767 1356 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 PDE8BO95263 885 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 SLC4A8Q2Y0W8 1093 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 RESP18Q5W5W9 173 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 PCDHB6Q9Y5E3 794 aa12.78□□□□□ -0.36
NEFM-201ENST00000221166 PRDM1O75626 825 aa12.77□□□□□ -0.36
NEFM-201ENST00000221166 KIF4BQ2VIQ3 1234 aa12.77□□□□□ -0.36
NEFM-201ENST00000221166 FOXP4Q8IVH2 680 aaPredicted RBP12.77□□□□□ -0.36
NEFM-201ENST00000221166 SPATA5Q8NB90 893 aa12.77□□□□□ -0.36
NEFM-201ENST00000221166 KRT23Q9C075 422 aa12.77□□□□□ -0.36
NEFM-201ENST00000221166 UBN2Q6ZU65 1347 aa12.77□□□□□ -0.36
NEFM-201ENST00000221166 PATL2C9JE40 543 aaKnown RBP12.77□□□□□ -0.37
NEFM-201ENST00000221166 SLFN14P0C7P3 912 aa12.77□□□□□ -0.37
NEFM-201ENST00000221166 PPP2R3AQ06190 1150 aa12.77□□□□□ -0.37
NEFM-201ENST00000221166 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
NEFM-201ENST00000221166 AKNAD1Q5T1N1 836 aa12.77□□□□□ -0.37
NEFM-201ENST00000221166 STRBPQ96SI9 672 aaKnown RBP12.77□□□□□ -0.37
NEFM-201ENST00000221166 CYP7A1P22680 504 aa12.77□□□□□ -0.37
NEFM-201ENST00000221166 SPECC1LQ69YQ0 1117 aa12.77□□□□□ -0.37
NEFM-201ENST00000221166 TOGARAM2Q6ZUX3 1019 aa12.77□□□□□ -0.37
NEFM-201ENST00000221166 LY9Q9HBG7 655 aa12.77□□□□□ -0.37
NEFM-201ENST00000221166 VPS54Q9P1Q0 977 aa12.77□□□□□ -0.37
NEFM-201ENST00000221166 CEP131Q9UPN4 1083 aa12.77□□□□□ -0.37
NEFM-201ENST00000221166 RIPOR2Q9Y4F9 1068 aa12.77□□□□□ -0.37
NEFM-201ENST00000221166 CCDC196A0A1B0GTZ2 297 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 UBE3CQ15386 1083 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 ZNF174Q15697 407 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 SMYD4Q8IYR2 804 aaPredicted RBP12.76□□□□□ -0.37
NEFM-201ENST00000221166 PTPAQ15257 358 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 USP49Q70CQ1 688 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 NLRP10Q86W26 655 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 OXER1Q8TDS5 423 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 TUBE1Q9UJT0 475 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 TUBB4AP04350 444 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 PNMA6AP0CW24 399 aaPredicted RBP12.76□□□□□ -0.37
NEFM-201ENST00000221166 BCAMP50895 628 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 FMR1Q06787 632 aaKnown RBP eCLIP12.76□□□□□ -0.37
NEFM-201ENST00000221166 GIGYF2Q6Y7W6 1299 aaKnown RBP12.76□□□□□ -0.37
NEFM-201ENST00000221166 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
NEFM-201ENST00000221166 NUTM2AQ8IVF1 878 aaPredicted RBP12.76□□□□□ -0.37
NEFM-201ENST00000221166 IGDCC4Q8TDY8 1250 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 SRRTQ9BXP5 876 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms