RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 USP5P45974 858 aa18.64■□□□□ 0.57
TMED1-201ENST00000214869 PPARAQ07869 468 aa18.64■□□□□ 0.57
TMED1-201ENST00000214869 AKNAD1Q5T1N1 836 aa18.64■□□□□ 0.57
TMED1-201ENST00000214869 CDC42EP5Q6NZY7 148 aa18.64■□□□□ 0.57
TMED1-201ENST00000214869 DHX32Q7L7V1 743 aaKnown RBP18.64■□□□□ 0.57
TMED1-201ENST00000214869 RNF41Q9H4P4 317 aaPredicted RBP18.64■□□□□ 0.57
TMED1-201ENST00000214869 PDRG1Q9NUG6 133 aa18.64■□□□□ 0.57
TMED1-201ENST00000214869 ROBO3Q96MS0 1386 aa18.63■□□□□ 0.57
TMED1-201ENST00000214869 USP17L12C9JPN9 530 aa18.63■□□□□ 0.57
TMED1-201ENST00000214869 USP17L21D6R901 530 aa18.63■□□□□ 0.57
TMED1-201ENST00000214869 YBX3P16989 372 aaKnown RBP eCLIP18.63■□□□□ 0.57
TMED1-201ENST00000214869 NT5C2P49902 561 aa18.63■□□□□ 0.57
TMED1-201ENST00000214869 COL9A3Q14050 684 aaPredicted RBP18.63■□□□□ 0.57
TMED1-201ENST00000214869 MB21D2Q8IYB1 491 aaPredicted RBP18.63■□□□□ 0.57
TMED1-201ENST00000214869 NCOA7Q8NI08 942 aa18.63■□□□□ 0.57
TMED1-201ENST00000214869 CNNM2Q9H8M5 875 aa18.63■□□□□ 0.57
TMED1-201ENST00000214869 USP40Q9NVE5 1235 aa18.63■□□□□ 0.57
TMED1-201ENST00000214869 HDAC9Q9UKV0 1011 aa18.63■□□□□ 0.57
TMED1-201ENST00000214869 UTRNP46939 3433 aa18.62■□□□□ 0.57
TMED1-201ENST00000214869 WDHD1O75717 1129 aaPredicted RBP18.62■□□□□ 0.57
TMED1-201ENST00000214869 USP17L8P0C7I0 530 aa18.62■□□□□ 0.57
TMED1-201ENST00000214869 CPA1P15085 419 aa18.62■□□□□ 0.57
TMED1-201ENST00000214869 EIF6P56537 245 aaKnown RBP18.62■□□□□ 0.57
TMED1-201ENST00000214869 ZNF280AP59817 542 aaPredicted RBP18.62■□□□□ 0.57
TMED1-201ENST00000214869 ANKRD1Q15327 319 aa18.62■□□□□ 0.57
TMED1-201ENST00000214869 C12orf60Q5U649 245 aa18.62■□□□□ 0.57
TMED1-201ENST00000214869 TGFBRAP1Q8WUH2 860 aa18.62■□□□□ 0.57
TMED1-201ENST00000214869 DPF2Q92785 391 aa18.62■□□□□ 0.57
TMED1-201ENST00000214869 ZBED3Q96IU2 234 aaPredicted RBP18.62■□□□□ 0.57
TMED1-201ENST00000214869 AGXT2Q9BYV1 514 aa18.62■□□□□ 0.57
TMED1-201ENST00000214869 DAXXQ9UER7 740 aaPredicted RBP18.62■□□□□ 0.57
TMED1-201ENST00000214869 FLT1P17948 1338 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 AK2P54819 239 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 CTDSPL2Q05D32 466 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 TRDNQ13061 729 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 CFAP100Q494V2 611 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 MFSD6Q6ZSS7 791 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 OGFOD1Q8N543 542 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 IDI2Q9BXS1 227 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 KRT23Q9C075 422 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 MCM9Q9NXL9 1143 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 TACC3Q9Y6A5 838 aa18.61■□□□□ 0.57
TMED1-201ENST00000214869 SPDYE2BA6NHP3 402 aa18.6■□□□□ 0.57
TMED1-201ENST00000214869 MINDY4BA8MYZ0 360 aa18.6■□□□□ 0.57
TMED1-201ENST00000214869 ORC4O43929 436 aa18.6■□□□□ 0.57
TMED1-201ENST00000214869 SPDYE6P0CI01 402 aa18.6■□□□□ 0.57
TMED1-201ENST00000214869 MCM5P33992 734 aa18.6■□□□□ 0.57
TMED1-201ENST00000214869 RALYLQ86SE5 291 aaKnown RBP18.6■□□□□ 0.57
TMED1-201ENST00000214869 MAPKAPK5Q8IW41 473 aa18.6■□□□□ 0.57
TMED1-201ENST00000214869 MTA3Q9BTC8 594 aa18.6■□□□□ 0.57
TMED1-201ENST00000214869 TAOK2Q9UL54 1235 aa18.6■□□□□ 0.57
TMED1-201ENST00000214869 LIMCH1Q9UPQ0 1083 aa18.6■□□□□ 0.57
TMED1-201ENST00000214869 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.6■□□□□ 0.57
TMED1-201ENST00000214869 ZBTB12Q9Y330 459 aaPredicted RBP18.6■□□□□ 0.57
TMED1-201ENST00000214869 COL2A1P02458 1487 aaPredicted RBP18.6■□□□□ 0.57
TMED1-201ENST00000214869 NEDD4P46934 1319 aa18.59■□□□□ 0.57
TMED1-201ENST00000214869 CYP2D7A0A087X1C5 515 aa18.59■□□□□ 0.57
TMED1-201ENST00000214869 SLC3A2P08195 630 aaKnown RBP18.59■□□□□ 0.57
TMED1-201ENST00000214869 AMOTL1Q8IY63 956 aa18.59■□□□□ 0.57
TMED1-201ENST00000214869 RBM5P52756 815 aaKnown RBP eCLIP18.58■□□□□ 0.57
TMED1-201ENST00000214869 ANTXR2P58335 489 aa18.58■□□□□ 0.57
TMED1-201ENST00000214869 CUL4AQ13619 759 aa18.58■□□□□ 0.57
TMED1-201ENST00000214869 TOB2Q14106 344 aaPredicted RBP18.58■□□□□ 0.57
TMED1-201ENST00000214869 DLGAP5Q15398 846 aa18.58■□□□□ 0.57
TMED1-201ENST00000214869 FKBP1CQ5VVH2 108 aa18.58■□□□□ 0.57
TMED1-201ENST00000214869 TMX3Q96JJ7 454 aa18.58■□□□□ 0.57
TMED1-201ENST00000214869 PRMT6Q96LA8 375 aaPredicted RBP18.58■□□□□ 0.57
TMED1-201ENST00000214869 ZSCAN31Q96LW9 406 aaPredicted RBP18.58■□□□□ 0.57
TMED1-201ENST00000214869 PCDHAC2Q9Y5I4 1007 aa18.58■□□□□ 0.57
TMED1-201ENST00000214869 ZNF541Q9H0D2 1346 aa18.57■□□□□ 0.56
TMED1-201ENST00000214869 MYH8P13535 1937 aa18.57■□□□□ 0.56
TMED1-201ENST00000214869 CYP2D6P10635 497 aa18.57■□□□□ 0.56
TMED1-201ENST00000214869 SLC4A3P48751 1232 aa18.57■□□□□ 0.56
TMED1-201ENST00000214869 EVCP57679 992 aa18.57■□□□□ 0.56
TMED1-201ENST00000214869 OSBPL5Q9H0X9 879 aaPredicted RBP18.57■□□□□ 0.56
TMED1-201ENST00000214869 DDX4Q9NQI0 724 aaKnown RBP18.57■□□□□ 0.56
TMED1-201ENST00000214869 B4E1Z4 1266 aa18.56■□□□□ 0.56
TMED1-201ENST00000214869 SMIM22K7EJ46 135 aa18.56■□□□□ 0.56
TMED1-201ENST00000214869 PRC1O43663 620 aa18.56■□□□□ 0.56
TMED1-201ENST00000214869 ENTPD3O75355 529 aa18.56■□□□□ 0.56
TMED1-201ENST00000214869 GMPSP49915 693 aaPredicted RBP18.56■□□□□ 0.56
TMED1-201ENST00000214869 Q6ZUG5 572 aa18.56■□□□□ 0.56
TMED1-201ENST00000214869 CYB5R4Q7L1T6 521 aa18.56■□□□□ 0.56
TMED1-201ENST00000214869 GPC2Q8N158 579 aa18.56■□□□□ 0.56
TMED1-201ENST00000214869 TMEM87BQ96K49 555 aa18.56■□□□□ 0.56
TMED1-201ENST00000214869 SH2B1Q9NRF2 756 aaPredicted RBP18.56■□□□□ 0.56
TMED1-201ENST00000214869 FAM198AQ9UFP1 575 aa18.56■□□□□ 0.56
TMED1-201ENST00000214869 SIPA1L1O43166 1804 aa18.56■□□□□ 0.56
TMED1-201ENST00000214869 GRIN3BO60391 1043 aa18.55■□□□□ 0.56
TMED1-201ENST00000214869 POLR3DP05423 398 aaPredicted RBP18.55■□□□□ 0.56
TMED1-201ENST00000214869 PLCD1P51178 756 aa18.55■□□□□ 0.56
TMED1-201ENST00000214869 PDE4BQ07343 736 aa18.55■□□□□ 0.56
TMED1-201ENST00000214869 NFIAQ12857 509 aa18.55■□□□□ 0.56
TMED1-201ENST00000214869 SPDYE2Q495Y8 402 aa18.55■□□□□ 0.56
TMED1-201ENST00000214869 TTC6Q86TZ1 520 aa18.55■□□□□ 0.56
TMED1-201ENST00000214869 NKX2-3Q8TAU0 364 aa18.55■□□□□ 0.56
TMED1-201ENST00000214869 ESR2Q92731 530 aa18.55■□□□□ 0.56
TMED1-201ENST00000214869 TCEANC2Q96MN5 208 aa18.55■□□□□ 0.56
TMED1-201ENST00000214869 INCENPQ9NQS7 918 aa18.55■□□□□ 0.56
TMED1-201ENST00000214869 ZSWIM5Q9P217 1185 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms