RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Rsph10bE9PYQ0 876 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Metap2O08663 478 aaKnown RBP12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Npy5rO70342 466 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Slc4a4O88343 1079 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Pde6aP27664 859 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Gpatch11Q3UFS4 262 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Dbndd1Q9CZ00 160 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Nfe2l3Q9WTM4 660 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Gja10Q9WUS4 505 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Wdr19Q3UGF1 1341 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Med23Q80YQ2 1367 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Gm20425E9Q035 978 aaKnown RBP12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 SrprbP47758 269 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Atp1a3Q6PIC6 1013 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Sept9Q80UG5 583 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Srp68Q8BMA6 625 aaKnown RBP12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Pold4Q9CWP8 107 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 ParvgQ9ERD8 331 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Cdc45Q9Z1X9 566 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Frmd7A2AD83 703 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Casp12O08736 419 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Map9Q3TRR0 646 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Lrrc43Q3V0L5 667 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Adck5Q80V03 582 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Tktl2Q9D4D4 627 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Gtf3c6Q9D8P7 227 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Dydc1Q9D9T0 175 aa12.09□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Zkscan7E9PVW1 718 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Eva1cP58659 440 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ccdc174Q3U155 467 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cep135Q6P5D4 1140 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Olfm5Q8BU90 496 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Smc2Q8CG48 1191 aaKnown RBP12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Lrrc2Q8VDB8 371 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Col4a3bpQ9EQG9 624 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Plch1Q4KWH5 1682 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Scn11aQ9R053 1765 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Myh2G3UW82 1942 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Myh3P13541 1940 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cyp24a1Q64441 514 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cct8l1Q80YT3 562 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Gpatch3Q8BIY1 525 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Bola3Q8CEI1 110 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Osbpl5Q9ER64 874 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Irs4Q9Z0Y7 1216 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Lgr5Q9Z1P4 907 aa12.08□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Brpf3B2KF05 1204 aaKnown RBP12.07□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Prl7d1P04769 244 aa12.07□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Slc7a3P70423 618 aa12.07□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Llgl2Q3TJ91 1027 aa12.07□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Tpm4Q6IRU2 248 aa12.07□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Hook1Q8BIL5 728 aa12.07□□□□□ -0.48
Ptpre-208ENSMUST00000211788 9230110C19RikQ8CC70 267 aa12.07□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Hnrnpul1Q8VDM6 859 aaKnown RBP12.07□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ccdc47Q9D024 483 aaKnown RBP12.07□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Clic4Q9QYB1 253 aa12.07□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Izumo3A6PWV3 263 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ppfibp2O35711 882 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Tnni2P13412 182 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Rtel1Q0VGM9 1203 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Fam107bQ3TGF2 131 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cep63Q3UPP8 700 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ccdc114Q3UX62 658 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Acnat2Q8BGG9 420 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Srek1Q8BZX4 494 aaKnown RBP12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Kiaa0319lQ8K135 1048 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Emilin2Q8K482 1074 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 HmcesQ8R1M0 353 aaKnown RBP12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 HdlbpQ8VDJ3 1268 aaKnown RBP12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Sf3b3Q921M3 1217 aaKnown RBP12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ccdc83Q9D4V3 305 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Zbtb21E9Q444 1094 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Stat5bP42232 786 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Mcm5P49718 733 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Siah1aP61092 282 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Tmem109Q3UBX0 243 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Rbm15bQ6PHZ5 887 aaKnown RBP12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 CerkQ8K4Q7 531 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Q8VDP2 222 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Stk38Q91VJ4 465 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Pcdhb15Q91Y04 786 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 CpdO89001 1377 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Rgs12Q8CGE9 1381 aa12.06□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Lcmt1A0A0U1RNF2 332 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Dennd3A2RT67 1274 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Celf1P28659 486 aaKnown RBP12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Gnat2P50149 354 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cplx2P84086 134 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Sh3bp5lQ99LH9 392 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Snw1Q9CSN1 536 aaKnown RBP12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Naa16Q9DBB4 864 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Efcc1Q9JJF6 558 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 InhbeO08717 350 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Mapkapk5O54992 473 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cnnm2Q3TWN3 875 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cdkl5Q3UTQ8 938 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Acbd5Q5XG73 508 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Slc44a1Q6X893 653 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Sec62Q8BU14 398 aaKnown RBP12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 McamQ8R2Y2 648 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms