RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Acbd3Q8BMP6 525 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Cc2d1bQ8BRN9 848 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Znf704Q9ERQ3 566 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Mkrn1Q9QXP6 481 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 4930407I10RikD3Z5T8 1512 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 MeiocA2AG06 965 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 MthfslL7N466 203 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Podxl2Q8CAE9 603 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Ano2Q8CFW1 1002 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Q9D5Q8 446 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Dpf1Q9QX66 387 aa15.62■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Hook2Q7TMK6 716 aa15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Usp37Q8C0R0 979 aa15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Hspa2P17156 633 aa15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Lrrc2Q8VDB8 371 aa15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Ppil4Q9CXG3 492 aaKnown RBP15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Mipol1Q9D9F8 279 aa15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Sos2Q02384 1333 aa15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Ddx31Q6NZQ2 687 aaKnown RBP15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Map7d1A2AJI0 846 aa15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Trak2Q6P9N8 913 aa15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Sh3d21Q7TSG5 549 aa15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Klhl30Q8C3F7 581 aa15.61■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Nfil3O08750 462 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Ccdc42Q5SV66 316 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Ehbp1Q69ZW3 1231 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Asic1Q6NXK8 526 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Galnt17Q7TT15 598 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Als2cr12Q8BVM7 383 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 PaoxQ8C0L6 504 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Ttc27Q8CD92 847 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Stag1Q9D3E6 1258 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Tacc2Q9JJG0 1149 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Rps6ka5Q8C050 863 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 DnmbpQ6TXD4 1580 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Stat5bP42232 786 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Amhr2Q8K592 568 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Cdca7Q9D0M2 382 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Ubn2Q80WC1 1314 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Flt4P35917 1363 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Cyp3a57D3YYZ0 503 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 GabrdP22933 449 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Bach2P97303 839 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Nlrp2Q4PLS0 1046 aaKnown RBP15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Large2Q5XPT3 690 aa15.6■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Msh6P54276 1358 aaKnown RBP15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Usp32F8VPZ3 1604 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Vgll3P85442 326 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Sgsm1Q8BPQ7 1093 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Stn1Q8K2X3 378 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Bst2Q8R2Q8 172 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Col4a3bpQ9EQG9 624 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Golga5Q9QYE6 729 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Nfxl1E9Q8I7 918 aaKnown RBP15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Vmn2r68L7N2B3 851 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Kif5bQ61768 963 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Cdca7lQ922M5 438 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 MypnQ5DTJ9 1315 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Col15a1O35206 1367 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 NpcdF8VQB8 469 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Ptgs1P22437 602 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Hook3Q8BUK6 718 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Calml4Q91WQ9 153 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Cxcl11Q9JHH5 100 aa15.59■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Ssr1Q9CY50 286 aaKnown RBP15.58■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Klhl10Q9D5V2 608 aa15.58■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Gtf2iQ9ESZ8 998 aaKnown RBP15.58■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Gdf11Q9Z1W4 405 aa15.58■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Zfp853A0A1D5RM95 733 aa15.58■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Zscan25B2RX31 543 aa15.58■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Cetn1P41209 172 aa15.58■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Hmgb1P63158 215 aaKnown RBP15.58■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Exoc1Q8R3S6 894 aa15.58■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Yeats4Q9CR11 227 aaKnown RBP15.58■□□□□ 0.09
Pcdha1-202ENSMUST00000193839 Tbc1d2B1AVH7 922 aa15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Parp1P11103 1013 aaKnown RBP15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Med23Q80YQ2 1367 aa15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Syce1Q9D495 329 aa15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Vwa3bJ9JI28 736 aa15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Ccdc174Q3U155 467 aa15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Pank2Q3U4S0 443 aa15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Erich4Q3UNU4 136 aa15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Prpf38aQ4FK66 312 aaKnown RBP15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Ccdc189Q6NZQ0 333 aa15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Sdad1Q80UZ2 687 aaKnown RBP15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Dph6Q9CQ28 267 aa15.58■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Adcy9P51830 1353 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Rsph10bE9PYQ0 876 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Rrp1P56183 494 aaKnown RBP15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Foxp1P58462 705 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 ClasrpQ8CFC7 668 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Smc1aQ9CU62 1233 aaKnown RBP15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Armc3A2AU72 881 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Ugt1a5B2RT14 529 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Pcdhb9E9Q5G2 828 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Tmed8Q3UHI4 326 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Cps1Q8C196 1500 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Atp10bB1AWN4 1474 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Myo3bQ1EG27 1305 aa15.57■□□□□ 0.08
Pcdha1-202ENSMUST00000193839 Pde11aP0C1Q2 933 aa15.57■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 82.5 ms