RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Lonrf2B2RT44 518 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Ppfia1B2RXQ2 1266 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Stk10O55098 966 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Sh3bp1P55194 680 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Patl1Q3TC46 770 aaKnown RBP10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 SyncQ9EPM5 470 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Elf2Q9JHC9 593 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Taf7Q9R1C0 341 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Pacsin2Q9WVE8 486 aaKnown RBP10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Cd109Q8R422 1442 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Top2bQ64511 1612 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Arhgap4B1AUY3 965 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Terf1P70371 421 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 RubcnQ80U62 956 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ccdc68Q8BVC4 333 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Kif2cQ922S8 721 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Dach1Q9QYB2 751 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gngt2Q61017 69 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Arhgef1Q61210 920 aaKnown RBP10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Fgd5Q80UZ0 1219 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Fam228aQ8CDW1 299 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Psip1Q99JF8 528 aaKnown RBP10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Spc24Q9D083 201 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ror2Q9Z138 944 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Zbtb12Q9Z150 459 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Rtl9Q32KG4 1339 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Naip1Q9QWK5 1403 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ttc21bQ0HA38 1315 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gnl3Q8CI11 538 aaKnown RBP10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 NapaQ9DB05 295 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 SufuQ9Z0P7 484 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Maip1Q8BHE8 291 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Klhl7Q8BUL5 586 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Lmod1Q8BVA4 595 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Xrcc4Q924T3 326 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Utp11Q9CZJ1 253 aaKnown RBP10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 ThrspQ62264 150 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Myl6bQ8CI43 207 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 CadpsQ80TJ1 1355 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 TnikP83510 1323 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gm5624F6ZZG8 207 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Lig3P97386 1015 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Zfp251Q6PCX8 632 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ppp2r5dQ91V89 594 aa10.33□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Bcap29Q61334 240 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Dmrt2Q8BG36 561 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Mrps25Q9D125 171 aaKnown RBP10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Tdrd9Q14BI7 1383 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 TchhA0A0B4J1F9 1599 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Arhgap42B2RQE8 841 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Card10P58660 1021 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Kiaa1024Q8K3V7 917 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Vps37bQ8R0J7 285 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Cog4Q8R1U1 785 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Calml3Q9D6P8 149 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Palm3A2TJV2 734 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Myl3P09542 204 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Wdr36Q3TAQ9 899 aaKnown RBP10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pls1Q3V0K9 630 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pex1Q5BL07 1284 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Tsr1Q5SWD9 803 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Trim21Q62191 470 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Daam2Q80U19 1115 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ppp1r10Q80W00 888 aaKnown RBP10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Kif2bQ8C0N1 668 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Plekho1Q9JIY0 408 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Itgb1bp2Q9R000 350 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Wdr70Q3TWF6 657 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Fam133bQ9CVI2 245 aaKnown RBP10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 MthfsQ9D110 203 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pdcd7Q9WTY1 482 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Camsap2Q8C1B1 1461 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Zmynd8A2A484 1235 aaKnown RBP10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 MafgO54790 162 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gja8P28236 440 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Tubgcp2Q921G8 905 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Prdm16A2A935 1275 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gm4758L7N258 96 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ccdc155Q80VJ8 648 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Nsmce1Q9D720 266 aa10.32□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ppfia4B8QI36 1187 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gm5168Q4KL04 211 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ccdc65Q8VHI7 493 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Sdccag3A2AIW0 432 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Cd72P21855 354 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ccdc50Q810U5 305 aaKnown RBP10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Amotl2Q8K371 772 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gna11P21278 359 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Myd88P22366 296 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Micall2Q3TN34 1009 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ano8Q6PB70 1060 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Rexo1Q7TT28 1213 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Usp8Q80U87 1080 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Nucks1Q80XU3 234 aaKnown RBP10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Hyou1Q9JKR6 999 aaKnown RBP10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Rtel1Q0VGM9 1203 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pnma5Q5DTT8 618 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gimap9G3X987 291 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Irx4Q9QY61 515 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 EprsQ8CGC7 1512 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 124.7 ms