RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Nop56Q9D6Z1 580 aaKnown RBP17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Rsrc1Q9DBU6 334 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Fmn2Q9JL04 1578 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 L1td1Q587J6 782 aaKnown RBP17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Krit1Q6S5J6 736 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Rexo1Q7TT28 1213 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ints8Q80V86 995 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Pak2Q8CIN4 524 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Gys2Q8VCB3 704 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Foxo3Q9WVH4 672 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Gm10110D3Z5M2 615 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Nfil3O08750 462 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Zbtb45Q52KG4 520 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Bicdl2Q8CHW5 507 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ccdc14Q8K2J4 934 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Akr1b8P45377 316 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 TchpQ3TVW5 497 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Trim28Q62318 834 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ctnna3Q65CL1 895 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Slc39a6Q8C145 765 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ccdc38Q8CDN8 563 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 RtcbQ99LF4 505 aaKnown RBP17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Jade3Q6IE82 823 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Atad3Q925I1 591 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ttc41Q692V3 1318 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Camsap3Q80VC9 1252 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Myom2Q14BI5 1463 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Mcur1Q9CXD6 340 aa17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Rbm12b2Q66JV4 834 aaKnown RBP17.34■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ubn2Q80WC1 1314 aa17.33■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 SkiQ60698 725 aa17.33■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Gpbp1Q6NXH3 473 aaKnown RBP17.33■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 SncbQ91ZZ3 133 aa17.33■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Bfsp1A2AMT1 669 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Zscan25B2RX31 543 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Ano9P86044 747 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 SpopQ6ZWS8 374 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Apol7cQ8C6E1 369 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Kiaa1024Q8K3V7 917 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Hfm1D3Z4R1 1434 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Kdm6aO70546 1401 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Btn2a2A4QPC6 514 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Exoc3l2D3YUP5 789 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Eif4a1P60843 406 aaKnown RBP17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Traf3ip3Q8C0G2 513 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Tsnaxip1Q99P25 704 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Hs6st3Q9QYK4 470 aa17.33■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Gm4758L7N258 96 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Mtx1P47802 317 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Nucks1Q80XU3 234 aaKnown RBP17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Lrrd1Q8C0R9 853 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Asxl2Q8BZ32 1370 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Camk4P08414 469 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Traf1P39428 409 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Eps15P42567 897 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Chl1P70232 1209 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Agbl1Q09M05 972 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Zfp781Q0P5U5 243 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Abcc1O35379 1528 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Mcm5P49718 733 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Sox13Q04891 613 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 MmeQ61391 750 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Tbc1d31Q6NXY1 996 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Atp1a3Q6PIC6 1013 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Col17a1Q07563 1470 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Diaph2O70566 1098 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Prl3d1P18121 224 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Stac3Q8BZ71 360 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Lonp2Q9DBN5 852 aa17.32■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Bin2D3Z6Q9 489 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Mtus1Q5HZI1 1210 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Eef1dP57776 281 aaKnown RBP17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 EsrrbQ61539 433 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 NelfbQ8C4Y3 580 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Nup58Q8R332 587 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Psmd1Q3TXS7 953 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Galnt17Q7TT15 598 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 HhatQ8BMT9 499 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Kdm5cP41230 1554 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Csrnp1P59054 583 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Taok1Q5F2E8 1001 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Atp6v0a4Q920R6 833 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 LpxnQ99N69 386 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Sept3Q9Z1S5 350 aa17.31■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Fam228aQ8CDW1 299 aa17.3■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Bbs5Q9CZQ9 341 aa17.3■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 1700018F24RikB2RW27 314 aa17.3■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Mex3cQ05A36 652 aaKnown RBP17.3■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 EspnlQ3UYR4 1005 aa17.3■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Mybpc2Q5XKE0 1136 aa17.3■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Eif2aQ8BJW6 581 aaKnown RBP17.3■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Klhl40Q9D783 621 aa17.3■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Skor2A7M7C7 1008 aa17.3■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 IqcdQ9D3V1 458 aa17.3■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Bst2Q8R2Q8 172 aa17.29■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Msantd4Q91YU3 345 aa17.29■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Eid1Q9DCR4 169 aa17.29■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Psma7Q9Z2U0 248 aa17.29■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 InsrrQ9WTL4 1300 aa17.29■□□□□ 0.36
Pcdha9-201ENSMUST00000115659 Gsta4P24472 222 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms