RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Ugt1a6bK9J7B2 531 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Pak1O88643 545 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Hspa2P17156 633 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ms4a2P20490 235 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 C87499Q3UX49 493 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Mdh1bQ5F204 500 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ccdc157Q5SPX1 718 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Arhgef1Q61210 920 aaKnown RBP9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ugt1a6Q64435 531 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Bend3Q6PAL0 825 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Kdm1aQ6ZQ88 853 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ugt1a7cQ6ZQM8 531 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Traf3ip3Q8C0G2 513 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ccdc14Q8K2J4 934 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 NgdnQ9DB96 315 aaKnown RBP9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Vstm4T1NXB5 319 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Prl3d3A0A0M6L0J6 224 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ccdc6D3YZP9 469 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Gm5934D3Z4U6 212 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ccdc152E9PX14 254 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ess2O70279 479 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 PparaP23204 468 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Irx1P81068 480 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Gas8Q60779 478 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 D130040H23RikQ8BII3 405 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Nop53Q8BK35 484 aaKnown RBP9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Bicd1Q8BR07 835 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Cgref1Q8R1U2 281 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Klhl40Q9D783 621 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Krt71Q9R0H5 524 aa9.36□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Gapvd1Q6PAR5 1458 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Lrrc7Q80TE7 1490 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Nck2O55033 380 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Cyp26a1O55127 497 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Surf1P09925 306 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Tnnc1P19123 161 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ppp1r21Q3TDD9 780 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ctdnep1Q3TP92 244 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Serpinb1cQ5SV42 375 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Stk38lQ7TSE6 464 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Hpcal4Q8BGZ1 191 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Rint1Q8BZ36 792 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Dis3l2Q8CI75 870 aaKnown RBP9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Tcp11l2Q8K1H7 517 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ddx54Q8K4L0 874 aaKnown RBP9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Tarbp1E9Q368 1579 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Sult6b1P0CC03 303 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Pde6aP27664 859 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Cdk4P30285 303 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 LbrQ3U9G9 626 aaKnown RBP9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 DbnlQ62418 436 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Wdr44Q6NVE8 915 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ppp4r3aQ6P2K6 820 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Prpf40bQ80W14 870 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 GopcQ8BH60 463 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Cep128Q8BI22 1102 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 NelfbQ8C4Y3 580 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Srgap2Q91Z67 1071 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Mcur1Q9CXD6 340 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 IqcdQ9D3V1 458 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Irx5Q9JKQ4 484 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Kifap3P70188 793 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ubac1Q8VDI7 409 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Tlcd1Q99JT6 247 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 EhhadhQ9DBM2 718 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Rapgef4Q9EQZ6 1011 aa9.35□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Gm20425E9Q035 978 aaKnown RBP9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 E9QMW4 1145 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 SrprbP47758 269 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Slc12a2P55012 1205 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Eif4a1P60843 406 aaKnown RBP9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Tcerg1lQ3B807 590 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Yipf3Q3UDR8 347 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Cdc37Q61081 379 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ccdc38Q8CDN8 563 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ulbp1Q8HWA3 334 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Fam217aQ9D9W6 419 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Pde3aQ9Z0X4 1141 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Aox4Q3TYQ9 1336 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Cnksr1A2A9K7 700 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Gm28042B7ZCM9 1014 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Hoxc9P09633 260 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Zfyve27Q3TXX3 415 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Adam1aQ60813 791 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Tubb2aQ7TMM9 445 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Cplx3Q8R1B5 158 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Pcdha12Q91Y18 950 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Tubb2bQ9CWF2 445 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Mei1Q9D4I2 1268 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 ErmardE9Q048 622 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Sem1P60897 70 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Surf6P70279 355 aaKnown RBP9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ica1lQ3TY65 431 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Ift20Q61025 132 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Hook3Q8BUK6 718 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Phf20l1Q8CCJ9 1013 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 LgsnQ8CIX8 563 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 PdhbQ9D051 359 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Fam84aQ9D650 292 aa9.34□□□□□ -0.91
Smarca1-203ENSMUST00000101616 Zfp781Q0P5U5 243 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms