RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Pla2g4aP47713 748 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Mea1Q64327 174 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Fnbp1Q80TY0 616 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 CntrobQ8CB62 887 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Exosc9Q9JHI7 438 aaKnown RBP10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Dctpp1Q9QY93 170 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Kiaa1210E9Q0C6 1637 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Zscan18E9PUD6 809 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Becn2P0DM65 447 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Chl1P70232 1209 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Tmed1Q3V009 227 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Wdr44Q6NVE8 915 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Ppp4r3aQ6P2K6 820 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Atp1a3Q6PIC6 1013 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Prpf40bQ80W14 870 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Rhot2Q8JZN7 620 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Rbm41Q8JZV4 413 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Tmem221Q8K071 230 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 SmtnQ921U8 923 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 PdhbQ9D051 359 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Telo2Q9DC40 840 aaKnown RBP10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Stxbp4Q9WV89 557 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Abcc3B2RX12 1523 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Wdr17E9Q271 1322 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 ClppO88696 272 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Gnai2P08752 355 aaKnown RBP10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Lamb3Q61087 1168 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Cct6bQ61390 531 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Phc1Q64028 1012 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Agtpbp1Q641K1 1218 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Tc2nQ91XT6 489 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 SncbQ91ZZ3 133 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Rabgef1Q9JM13 491 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Sept3Q9Z1S5 350 aa10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Psma5Q9Z2U1 241 aaKnown RBP10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Usp54Q8BL06 1588 aaKnown RBP10.98□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Alpk3Q924C5 1678 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Klrb1Q0ZUP1 214 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Adgrb1Q3UHD1 1582 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Ppp1r42Q8R1Z4 357 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 ZgpatQ8VDM1 511 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Med1Q925J9 1575 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Ppfia1B2RXQ2 1266 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Maml3D4QGC2 1135 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Myo1eE9Q634 1107 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Nedd9O35177 833 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Lmnb2P21619 596 aaKnown RBP10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Cplx4Q80WM3 160 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Cul5Q9D5V5 780 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 MajinQ9D992 256 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Kank3Q9Z1P7 791 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Lrrc7Q80TE7 1490 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 AglF8VPN4 1532 aa10.97□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Usp51B1AY15 661 aa10.96□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Mcmdc2E9Q956 681 aa10.96□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 FsbpQ8BKE5 299 aa10.96□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Lrrc45Q8CIM1 670 aa10.96□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 HdlbpQ8VDJ3 1268 aaKnown RBP10.96□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Uap1Q91YN5 522 aa10.96□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Naa16Q9DBB4 864 aa10.96□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Rsrc1Q9DBU6 334 aa10.96□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Opa1P58281 960 aa10.96□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ccdc110Q3V125 848 aa10.96□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Usp13Q5BKP2 858 aa10.96□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Klra7Q60654 280 aa10.96□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Nlrp4eQ66X19 978 aa10.96□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 SrlQ7TQ48 910 aa10.96□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Bpifb6Q8BU51 449 aa10.96□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 AslQ91YI0 464 aa10.96□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Mmtag2Q99LX5 260 aaKnown RBP10.96□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 PalmQ9Z0P4 383 aa10.96□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Taf4bG5E8Z2 855 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Pde4cQ3UEI1 686 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Dnajc8Q6NZB0 253 aaKnown RBP10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Rexo4Q6PAQ4 432 aaKnown RBP10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Cep104Q80V31 926 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Stkld1Q80YS9 662 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ccdc181Q80ZU5 509 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Gpcpd1Q8C0L9 675 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Klhl30Q8C3F7 581 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Usp20Q8C6M1 916 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Psmd2Q8VDM4 908 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Trim11Q99PQ2 467 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Depdc5P61460 1591 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Slfn8B1ARD8 910 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Bin1O08539 588 aaKnown RBP10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 InhbeO08717 350 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Stim2P83093 746 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Specc1Q5SXY1 1067 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ankrd23Q812A3 306 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Smndc1Q8BGT7 238 aaKnown RBP10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Sp8Q8BMJ8 486 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Als2cr12Q8BVM7 383 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Kif2bQ8C0N1 668 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Mettl5Q8K1A0 209 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 P3h4Q8K2B0 443 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 NptxrQ99J85 493 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Atp6v1g1Q9CR51 118 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Arhgap5P97393 1501 aa10.95□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 A0A1W2P6Q8 802 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms