RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Sox30Q8CGW4 782 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 BaatQ91X34 420 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ccdc39Q9D5Y1 937 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Med23Q80YQ2 1367 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Crb1Q8VHS2 1405 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Krt24A1L317 512 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Pde8bE9Q4S1 865 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ccdc174Q3U155 467 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 C87499Q3UX49 493 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Fam53cQ8BXQ8 393 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ankk1Q8BZ25 745 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Spata32Q8C5V0 334 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Rtn1Q8K0T0 780 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Sirt2Q8VDQ8 389 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Riok1Q922Q2 567 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Tab2Q99K90 693 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Lonp2Q9DBN5 852 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Cbx6Q9DBY5 414 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 EmbP21995 330 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Brd3Q8K2F0 726 aaKnown RBP11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Iqca1Q9CUL5 857 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Kcnq5Q9JK45 933 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Nek3Q9R0A5 511 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Tiam2Q6ZPF3 1715 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Pip4k2bQ80XI4 416 aa11.21□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Hic2Q9JLZ6 619 aaKnown RBP11.21□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Zbtb7aO88939 569 aaKnown RBP11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Rtel1Q0VGM9 1203 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 PsdQ5DTT2 1024 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 ErmnQ5EBJ4 281 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Cyp7b1Q60991 507 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Slitrk3Q810B9 980 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tada3Q8R0L9 432 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Myh2G3UW82 1942 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Kif2aP28740 705 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ncoa7Q6DFV7 943 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Asnsd1Q8BFS9 627 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Evc2Q8K1G2 1220 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Pold4Q9CWP8 107 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Chaf1aQ9QWF0 911 aa11.21□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Zfp597E9Q6S0 419 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Slc4a4O88343 1079 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Plcb3P51432 1234 aaKnown RBP11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Foxp1P58462 705 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Slfnl1Q8BHW9 410 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Zbtb1Q91VL9 713 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 WtapQ9ER69 396 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Mroh6V9GX81 722 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tpm3-rs7D3Z2H9 248 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Trim34bJ3QNR8 485 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Casp12O08736 419 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tpm4Q6IRU2 248 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Csrnp2Q8BGQ2 534 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Amigo3Q8C2S7 508 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ccdc12Q8R344 166 aaKnown RBP11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 GdaQ9R111 454 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Nrxn3Q6P9K9 1571 aa11.2□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Cyp2j7A0A140T8U1 504 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Il7P10168 154 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 HdgfP51859 237 aaKnown RBP11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Anp32eP97822 260 aaKnown RBP11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Smim5Q8BT42 78 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Nek1P51954 1203 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Otop3Q80UF9 577 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Cnpy3Q9DAU1 276 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tnrc6cQ3UHC0 1690 aaKnown RBP11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ampd3O08739 766 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Hspa4Q61316 841 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ufl1Q8CCJ3 793 aaKnown RBP11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Rbm28Q8CGC6 750 aaKnown RBP11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Cd209bQ8CJ91 325 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Stk39Q9Z1W9 556 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Myh7Q91Z83 1935 aa11.19□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 A0A0U1RNP2 1173 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Dhx8A2A4P0 1244 aaKnown RBP11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Phldb3E9QAF4 648 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Vgll3P85442 326 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Slc7a1Q09143 622 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tmco3Q8BH01 678 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 SelenooQ9DBC0 667 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Setdb1O88974 1307 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 SsbP32067 415 aaKnown RBP11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Clec16aQ80U30 1036 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Hps6Q8BLY7 805 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Phf20l1Q8CCJ9 1013 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Mylk2Q8VCR8 613 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tc2nQ91XT6 489 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Cep89Q9CZX2 791 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Popdc2Q9ES82 367 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Myo3bQ1EG27 1305 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Sun3Q5SS91 320 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Mkrn3Q60764 544 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Cyp4x1Q6A152 507 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Atp1a2Q6PIE5 1020 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Dusp9Q7TNL7 452 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Dcaf5Q80T85 946 aa11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Gtpbp4Q99ME9 634 aaKnown RBP11.18□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Btn2a2A4QPC6 514 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Fam89aQ14BJ1 175 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tbx2Q60707 711 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms