RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Cbx2P30658 519 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Edrf1Q6GQV7 1239 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ireb2Q811J3 963 aaKnown RBP8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Col11a2Q64739 1736 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 SrcapA0A087WQ44 3271 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Rbm8a2A0A0N4SUH6 174 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Dhx8A2A4P0 1244 aaKnown RBP8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 RdxP26043 583 aaKnown RBP8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Pdia3P27773 505 aaKnown RBP8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Lgr6Q3UVD5 967 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Otop3Q80UF9 577 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Fam102bQ8BQS4 339 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Rbm8aQ9CWZ3 174 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Mlh1Q9JK91 760 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 NpcdF8VQB8 469 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Usp17ldG5E8G2 545 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Usp17lcG5E8I7 545 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Prl7a2O54831 253 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Adamts19P59509 1210 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Znf667Q2TL60 609 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Insm1Q63ZV0 521 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Galntl5Q9D4M9 431 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Gm30191A0A0U1RNT7 187 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Mybl2P48972 704 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Qrich1Q3UA37 777 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Stxbp2Q64324 593 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Map10Q8BJS7 891 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Phf23Q8BSN5 401 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Osbpl2Q8BX94 484 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ttc8Q8VD72 515 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Glrx3Q9CQM9 337 aa8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Zswim8Q3UHH1 1832 aaKnown RBP8.07□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ccdc183A2AJB1 534 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Pcsk7Q61139 770 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 RubcnQ80U62 956 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 ImmtQ8CAQ8 757 aaKnown RBP8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Snap47Q8R570 413 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Zbtb43Q9DAI4 467 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Slc4a9E9PUP3 929 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Tpm2P58774 284 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Lrch1P62046 709 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Sap30bpQ02614 308 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Exoc8Q6PGF7 716 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ppip5k2Q6ZQB6 1129 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Phf20Q8BLG0 1010 aaKnown RBP8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Epc2Q8C0I4 808 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Pms1Q8K119 917 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Txnrd3Q99MD6 652 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Hspd1P63038 573 aaKnown RBP8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Pls1Q3V0K9 630 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Cfap52Q5F201 620 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Kank4Q6P9J5 1016 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Zbtb39Q6PDK0 712 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 DymQ8CHY3 669 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Borcs6Q9D6W8 360 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Jag1Q9QXX0 1218 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Dnai2A2AC93 623 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Hap1O35668 628 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Anapc15P60007 132 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Cct2P80314 535 aaKnown RBP8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Eya3P97480 510 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Cep131Q62036 1060 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 DlatQ8BMF4 642 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Nek11Q8C0Q4 628 aa8.06□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Vmn2r68L7N2B3 851 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Zc3h15Q3TIV5 426 aaKnown RBP8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Lins1Q3U1D0 764 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Sel1lQ9Z2G6 790 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Lrp5Q91VN0 1614 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Dlg5E9Q9R9 1921 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Rfx1P48377 963 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Tbc1d9bQ5SVR0 1263 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Lamc2Q61092 1191 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 GnptabQ69ZN6 1235 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Zfp341Q6PGC9 846 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Cnksr2Q80YA9 1032 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Nol12Q8BG17 217 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Cep55Q8BT07 462 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Adgra1Q8C4G9 578 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Tmc1Q8R4P5 757 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Trex1Q91XB0 314 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Kif13bA0A286YCV9 1847 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Pdia4P08003 638 aaKnown RBP8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ces3aQ63880 571 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ccdc158Q8CDI6 1109 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ces3bQ8VCU1 571 aa8.05□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Sept2P42208 361 aaKnown RBP8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Gnat2P50149 354 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Syne4Q8CII8 388 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Defb15Q8R2I5 79 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Eaf2Q91ZD6 262 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Q9D9S1 216 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Epb41l3Q9WV92 929 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 S1pr4Q9Z0L1 386 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Aak1Q3UHJ0 959 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Akap4Q60662 849 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Fsd1Q7TPM6 496 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Rnf41Q8BH75 317 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ccdc47Q9D024 483 aaKnown RBP8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Prkab1Q9R078 270 aa8.04□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms