RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Dact1Q8R4A3 778 aa9.4□□□□□ -0.91
Cdc40-201ENSMUST00000044166 MbipQ99LQ1 341 aa9.4□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Gm3409A0A0G2JE67 319 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Dapk3O54784 448 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Plcb3P51432 1234 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Znhit6Q3UFB2 460 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Sh3gl3Q62421 347 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ltv1Q6NSQ7 470 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Drc7Q6V3W6 876 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tmem266Q8BZB3 538 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 ImmtQ8CAQ8 757 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Zc3h4Q6ZPZ3 1304 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Gm20425E9Q035 978 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 SrprbP47758 269 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tab3Q571K4 716 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 TxlnaQ6PAM1 554 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cand2Q6ZQ73 1235 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tmem59lQ7TNI2 337 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Trim56Q80VI1 734 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cnksr2Q80YA9 1032 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Sec62Q8BU14 398 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Bicdl2Q8CHW5 507 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tbx22Q8K402 517 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ccdc12Q8R344 166 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Inf2Q0GNC1 1273 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Gsdma2Q32M21 443 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Rap1gap2Q5SVL6 712 aaKnown RBP9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 ZyxQ62523 564 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ctnna3Q65CL1 895 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Pcdhb14Q6PB90 796 aa9.39□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Nfat5Q9WV30 1534 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Gm5624F6ZZG8 207 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Mdh1P14152 334 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tbx2Q60707 711 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ankle2Q6P1H6 964 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Acnat2Q8BGG9 420 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Evc2Q8K1G2 1220 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ppp1r12aQ9DBR7 1029 aaKnown RBP9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Hap1O35668 628 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cplx2P84086 134 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Fam71bQ5STT6 665 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Dpf2Q61103 391 aaKnown RBP9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Luc7l2Q7TNC4 392 aaKnown RBP9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Slc39a6Q8C145 765 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Flad1Q8R123 492 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Lmbr1Q9JIT0 490 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Dpf1Q9QX66 387 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Vnn1Q9Z0K8 512 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Pold1P52431 1105 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Lamb3Q61087 1168 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 FntaQ61239 377 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Atg9aQ68FE2 551 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Krt39Q6IFX4 482 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ppp2r5aQ6PD03 486 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Asnsd1Q8BFS9 627 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Fam102bQ8BQS4 339 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ccdc150Q8CDI7 1110 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Smc4Q8CG47 1286 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Trim42Q9D2H5 723 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Kcnh3Q9WVJ0 1095 aa9.38□□□□□ -0.91
Cdc40-201ENSMUST00000044166 PnnO35691 725 aaKnown RBP9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Mcm5P49718 733 aa9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cdkl5Q3UTQ8 938 aa9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Carmil3Q3UFQ8 1375 aa9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Robo1O89026 1612 aa9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Exoc3l2D3YUP5 789 aa9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Dnm1P39053 867 aa9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Klra3Q64329 266 aa9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Smc1bQ920F6 1248 aa9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ppp4r3bQ922R5 820 aa9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Wnk3Q80XP9 1757 aa9.37□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Epb41l2O70318 988 aaKnown RBP9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Eif5P59325 429 aaKnown RBP9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ccdc114Q3UX62 658 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Jakmip3Q5DTN8 844 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ccdc57Q6PHN1 1016 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Asap2Q7SIG6 958 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tut1Q8R3F9 869 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 TkfcQ8VC30 578 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Desi2Q9D291 194 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Simc1E9Q6E9 1354 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Pde4bB1AWC9 736 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Mnat1P51949 309 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Q66JV7 365 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Bsdc1Q80Y55 427 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tcp11l1Q8BTG3 509 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tc2nQ91XT6 489 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Prc1Q99K43 603 aaKnown RBP9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Phkg2Q9DB30 406 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Baiap2l1Q9DBJ3 514 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Topaz1E5FYH1 1653 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Eya2O08575 532 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Metap2O08663 478 aaKnown RBP9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Me1P06801 572 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Epha2Q03145 977 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Slc7a1Q09143 622 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Trim37Q6PCX9 961 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Fchsd1Q6PFY1 688 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Gnl3lQ6PGG6 577 aaKnown RBP9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 ThemisQ8BGW0 636 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms