RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Gm20425E9Q035 978 aaKnown RBP20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 SrprbP47758 269 aa20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Clic6Q8BHB9 596 aa20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Sugp2Q8CH09 1067 aa20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Zfp781Q0P5U5 243 aa20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Arhgef2Q60875 985 aa20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Dis3l2Q8CI75 870 aaKnown RBP20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Vps36Q91XD6 386 aa20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Pdcd6ipQ9WU78 869 aaKnown RBP20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Cep63Q3UPP8 700 aa20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Drc1Q3USS3 753 aa20.68■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Cyp26a1O55127 497 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Atf5O70191 283 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Dcaf17Q3TUL7 519 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Cfap100Q80VN0 613 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Krt222Q8CCX5 294 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Klhl40Q9D783 621 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Znf394Q9Z1D9 521 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Krt8P11679 490 aaKnown RBP20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Nlrp1aQ2LKU9 1182 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Ovgp1Q62010 721 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Dnm3Q8BZ98 863 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Rrbp1Q99PL5 1605 aaKnown RBP20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Ppp1r9aH3BJD6 1292 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Spa17Q62252 149 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 TrhQ62361 256 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 MthfslL7N466 203 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Irf5P56477 497 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 TchpQ3TVW5 497 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Usp28Q5I043 1051 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Naa25Q8BWZ3 972 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Spats2Q8K1N4 545 aaKnown RBP20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Arhgef11Q68FM7 1552 aa20.67■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Terf1P70371 421 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Dact3Q0PHV7 610 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Kif1bpQ6ZPU9 617 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Ribc1Q9D0B8 379 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Otud7bB2RUR8 840 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Pde11aP0C1Q2 933 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Eef1dP57776 281 aaKnown RBP20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Krt77Q6IFZ6 572 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Gpbp1Q6NXH3 473 aaKnown RBP20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Atad2Q8CDM1 1040 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 AdpgkQ8VDL4 496 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Aox2Q5SGK3 1345 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Rad23aP54726 363 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Agbl1Q09M05 972 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Wdr70Q3TWF6 657 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Pdzd9Q9D9M4 266 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Plxnc1Q9QZC2 1574 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Nbr1P97432 988 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Klhl7Q8BUL5 586 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Kiaa1524Q8BWY9 907 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Apol10aQ8CCA5 318 aa20.66■□□□□ 0.9
Ebf3-201ENSMUST00000033378 LpxnQ99N69 386 aa20.65■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Plch2A2AP18 1501 aa20.65■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Efcab6Q6P1E8 1516 aa20.65■□□□□ 0.9
Ebf3-201ENSMUST00000033378 KaznQ69ZS8 779 aa20.65■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Hirip3Q8BLH7 601 aa20.65■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Mrpl50Q8VDT9 159 aaKnown RBP20.65■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Mcur1Q9CXD6 340 aa20.65■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Depdc1bQ8BH88 529 aa20.65■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Gm43638A0A0J9YU36 694 aa20.65■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Kifc2O08672 792 aa20.65■□□□□ 0.9
Ebf3-201ENSMUST00000033378 InsrrQ9WTL4 1300 aa20.64■□□□□ 0.9
Ebf3-201ENSMUST00000033378 EngaseQ8BX80 734 aa20.64■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Pcdhb15Q91Y04 786 aa20.64■□□□□ 0.9
Ebf3-201ENSMUST00000033378 Pak2Q8CIN4 524 aa20.64■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Cd209bQ8CJ91 325 aa20.64■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Tacc3Q9JJ11 631 aa20.64■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Cabp5Q9JLK3 173 aa20.64■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ncf1Q09014 390 aa20.64■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Bicdl2Q8CHW5 507 aa20.64■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Sde2Q8K1J5 448 aaKnown RBP20.64■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Synpo2Q91YE8 1087 aaKnown RBP20.64■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Tarbp1E9Q368 1579 aa20.64■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Gbp8Q2V6D6 525 aa20.64■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Senp1P59110 640 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Krt39Q6IFX4 482 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Bola3Q8CEI1 110 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Pcdha7Q91Y13 937 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 CpvlQ9D3S9 478 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ccdc91Q9D8L5 442 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Gbp2Q9Z0E6 589 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Mbd5B1AYB6 1498 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Zdhhc9P59268 364 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Haus1Q8BHX1 278 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Klhl20Q8VCK5 604 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ddx41Q91VN6 622 aaKnown RBP20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Eif4g3Q80XI3 1579 aaKnown RBP20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ccdc152E9PX14 254 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Atp8a2P98200 1148 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 DbnlQ62418 436 aa20.63■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Proca1B0QZF7 307 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ccdc170D3YXL0 722 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Spata24Q6P926 205 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 EhhadhQ9DBM2 718 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ankrd24Q80VM7 985 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Arid5bQ8BM75 1188 aaKnown RBP20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Mxra7Q9CZH7 178 aa20.62■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms