RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Erlin1Q91X78 346 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ctdnep1Q3TP92 244 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Foxd1Q61345 456 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Madcam1Q61826 405 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ttc27Q8CD92 847 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Galntl5Q9D4M9 431 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Zbtb43Q9DAI4 467 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Spef2Q8C9J3 1734 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Atp8b3Q6UQ17 1335 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Myd88P22366 296 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 XpcP51612 930 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Slc7a3P70423 618 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Sdad1Q80UZ2 687 aaKnown RBP12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Triml1Q8BVP1 470 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Krtap5-3Q9D226 196 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 4930449I24RikQ9D5E3 319 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Sipa1l2Q80TE4 1722 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ccdc121E9Q6D3 323 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Sec24cG3X972 1096 aaKnown RBP12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 CltaO08585 235 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Sparcl1P70663 650 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Arhgef2Q60875 985 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Taco1Q8K0Z7 294 aaKnown RBP12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 NapgQ9CWZ7 312 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 FancaQ9JL70 1439 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Kifc2O08672 792 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Pla2g4fQ50L41 855 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Atf3Q60765 181 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Rassf6Q80UQ2 353 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Cfap69Q8BH53 942 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Klhl7Q8BUL5 586 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Slc35g1Q8BY79 368 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Nod2Q8K3Z0 1020 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Asic2Q925H0 512 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Mipol1Q9D9F8 279 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Mdh1bQ5F204 500 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Igbp1Q61249 340 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Brwd3A2AHJ4 1799 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ubr1O70481 1757 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Wdr17E9Q271 1322 aa12.06□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Nfxl1E9Q8I7 918 aaKnown RBP12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Krt25Q8VCW2 446 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Dph6Q9CQ28 267 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Zmym3Q9JLM4 1370 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Cep63Q3UPP8 700 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ano8Q6PB70 1060 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Rab11fip4Q8BQP8 635 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Nop2Q922K7 793 aaKnown RBP12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Disp3A3KFU9 1347 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Cyp26c1B2RXA7 518 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 NpeppsQ11011 920 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Rnf40Q3U319 1001 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ncoa4Q5U4H9 625 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Large1Q9Z1M7 756 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 NntQ61941 1086 aaKnown RBP12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Gpt2Q8BGT5 522 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Kirrel3Q8BR86 778 aa12.05□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Sycp2lA0A0M3U1B0 842 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Dnai2A2AC93 623 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 LbrQ3U9G9 626 aaKnown RBP12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ehmt1Q5DW34 1296 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Kcna6Q61923 529 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Acsbg1Q99PU5 721 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ebag9Q9D0V7 213 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Atp7bQ64446 1462 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Art2bO35975 289 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ddx17Q501J6 650 aaKnown RBP12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Kiaa1328Q6NZK5 612 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Farp2Q91VS8 1065 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 BaatQ91X34 420 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Tlcd1Q99JT6 247 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Yeats4Q9CR11 227 aaKnown RBP12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Lmbr1Q9JIT0 490 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Elf1Q60775 612 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Trim56Q80VI1 734 aaKnown RBP12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Taf5lQ91WQ5 589 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Pold4Q9CWP8 107 aa12.04□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Map2P20357 1828 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Aox2Q5SGK3 1345 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Abtb2Q7TQI7 1024 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Rassf2Q8BMS9 326 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Bicdl2Q8CHW5 507 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Cd209bQ8CJ91 325 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Kcnh5Q920E3 988 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 BrapQ99MP8 591 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Scn7aB1AYL1 1681 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Gm28042B7ZCM9 1014 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Tcp10bE9PYJ0 438 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Slc4a4O88343 1079 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ccdc42Q5SV66 316 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Morc2aQ69ZX6 1030 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Panx2Q6IMP4 677 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 GopcQ8BH60 463 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ranbp6Q8BIV3 1105 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Uba5Q8VE47 403 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Rbm5Q91YE7 815 aaKnown RBP12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 IkQ9Z1M8 557 aaKnown RBP12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Knop1Q9Z2Q2 478 aaKnown RBP12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Palm3A2TJV2 734 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Eef2P58252 858 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms