RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Ccdc66Q6NS45 935 aa13.01□□□□□ -0.33
Trim55-201ENSMUST00000029139 Acap3Q6NXL5 833 aa13.01□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ccdc12Q8R344 166 aaKnown RBP13.01□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ttll5Q8CHB8 1328 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Prpf4bQ61136 1007 aaKnown RBP13□□□□□ -0.33
Trim55-201ENSMUST00000029139 FsbpQ8BKE5 299 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Nop9Q8BMC4 636 aaKnown RBP13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Pcdhb3Q91XZ7 784 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Net1Q9Z206 595 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ssh2Q5SW75 1423 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ppef1O35655 650 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Stim1P70302 685 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 G3bp1P97855 465 aaKnown RBP13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Specc1lQ2KN98 1118 aaKnown RBP13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Pls1Q3V0K9 630 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Satb1Q60611 764 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Mea1Q64327 174 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Myo6Q64331 1265 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Prpf40bQ80W14 870 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Aldh5a1Q8BWF0 523 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Brd3Q8K2F0 726 aaKnown RBP13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Agap3Q8VHH5 910 aa13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Rrp15Q9CYX7 281 aaKnown RBP13□□□□□ -0.33
Trim55-201ENSMUST00000029139 Tmem94Q7TSH8 1360 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Gm4985A2ALC6 410 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ankrd44B2RXR6 993 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Gml2G5E8L7 176 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Gm5814J3QP80 125 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Kdm7aQ3UWM4 940 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Trim80Q3V061 624 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Lamb3Q61087 1168 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Tubb2aQ7TMM9 445 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ccdc93Q7TQK5 629 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Acbd3Q8BMP6 525 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Rassf2Q8BMS9 326 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Arhgap18Q8K0Q5 663 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Stk31Q99MW1 1018 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Mrfap1Q9CQL7 125 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Tubb2bQ9CWF2 445 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 PapolbQ9WVP6 641 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Wdr46Q9Z0H1 622 aaKnown RBP12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Krt85Q9Z2T6 507 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Rhbdl3P58873 404 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Atp8a1P70704 1164 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Usp48Q3V0C5 1052 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Lrsam1Q80ZI6 727 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Cdc23Q8BGZ4 597 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 FanclQ9CR14 375 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ddx25Q9QY15 484 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 Entpd5Q9WUZ9 427 aa12.99□□□□□ -0.33
Trim55-201ENSMUST00000029139 TnksQ6PFX9 1320 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Znf536Q8K083 1302 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ccdc191J3QQ27 883 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Mybl1P51960 751 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Phc1Q64028 1012 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Sec24bQ80ZX0 1251 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Hook1Q8BIL5 728 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Kiaa1524Q8BWY9 907 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Msh5Q9QUM7 833 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Dot1lQ6XZL8 1540 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Luc7l3Q5SUF2 432 aaKnown RBP12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Sh3gl2Q62420 352 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Pcdh18Q8VHR0 1134 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 Erc1Q99MI1 1120 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 PdhbQ9D051 359 aa12.98□□□□□ -0.33
Trim55-201ENSMUST00000029139 NexmifQ5DTT1 1515 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ccdc170D3YXL0 722 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Zfp651E9PZ11 729 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Kif1cO35071 1100 aaKnown RBP12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Hoxd11P23813 323 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Nol8Q3UHX0 1147 aaKnown RBP12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Znf652Q5DU09 608 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ppfibp1Q8C8U0 969 aaKnown RBP12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Pof1bQ8K4L4 587 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Cys1Q8R4T1 145 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Tgs1Q923W1 853 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 ToporslQ9D2F8 683 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ttc30a2A2AKQ8 664 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Myo1aO88329 1043 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Serpinb6dQ3UWK8 375 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Fchsd1Q6PFY1 688 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Hook3Q8BUK6 718 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Q8BWG4 1187 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ttc30a1Q99J38 664 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Ttc30bQ9CY00 664 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Cul5Q9D5V5 780 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 Slx4ipQ9D7Y9 413 aa12.97□□□□□ -0.33
Trim55-201ENSMUST00000029139 1700113H08RikE9Q9Q5 327 aa12.96□□□□□ -0.33
Trim55-201ENSMUST00000029139 Xirp1O70373 1129 aa12.96□□□□□ -0.33
Trim55-201ENSMUST00000029139 Casp4P70343 373 aa12.96□□□□□ -0.33
Trim55-201ENSMUST00000029139 Xrn1P97789 1719 aaKnown RBP12.96□□□□□ -0.33
Trim55-201ENSMUST00000029139 NntQ61941 1086 aaKnown RBP12.96□□□□□ -0.33
Trim55-201ENSMUST00000029139 Cplx4Q80WM3 160 aa12.96□□□□□ -0.33
Trim55-201ENSMUST00000029139 Pank4Q80YV4 820 aa12.96□□□□□ -0.33
Trim55-201ENSMUST00000029139 PlgrktQ9D3P8 147 aa12.96□□□□□ -0.33
Trim55-201ENSMUST00000029139 Gm4981Q3ULJ8 291 aa12.96□□□□□ -0.34
Trim55-201ENSMUST00000029139 Foxd1Q61345 456 aa12.96□□□□□ -0.34
Trim55-201ENSMUST00000029139 Naa35Q6PHQ8 725 aa12.96□□□□□ -0.34
Trim55-201ENSMUST00000029139 R3hdm2Q80TM6 1044 aaKnown RBP12.96□□□□□ -0.34
Trim55-201ENSMUST00000029139 Nek9Q8K1R7 984 aa12.96□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms