RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Trim11Q99PQ2 467 aa20.19■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 SelenooQ9DBC0 667 aa20.19■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 PnnO35691 725 aaKnown RBP20.19■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Sdc2P43407 202 aa20.19■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Ppp1r7Q3UM45 361 aa20.19■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Prkab2Q6PAM0 271 aa20.19■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Ctdspl2Q8BG15 465 aa20.19■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Fam102bQ8BQS4 339 aa20.19■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Polr2dQ9D7M8 142 aaKnown RBP20.19■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Metap2O08663 478 aaKnown RBP20.18■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Cyp26a1O55127 497 aa20.18■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Cnnm1Q0GA42 951 aa20.18■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Ift88Q61371 824 aa20.18■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Lama4P97927 1816 aa20.18■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Gm10134F6ZQC6 126 aa20.18■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Clec16aQ80U30 1036 aa20.18■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 GzmnQ920S1 248 aa20.18■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Mfap3lQ9D3X9 409 aa20.18■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Tube1Q9D6T1 475 aa20.18■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Nwd2Q6P5U7 1742 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Sik3Q6P4S6 1311 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 SsbP32067 415 aaKnown RBP20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Cct5P80316 541 aaKnown RBP20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Llgl2Q3TJ91 1027 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Cdkl5Q3UTQ8 938 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 CtcfQ61164 736 aaKnown RBP20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Npdc1Q64322 332 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Tcp11l2Q8K1H7 517 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Arhgef6Q8K4I3 771 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 ToporslQ9D2F8 683 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Mkrn1Q9QXP6 481 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Grin1P35438 938 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Anks1bQ8BIZ1 1259 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Slc39a6Q8C145 765 aa20.17■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Krt86P97861 486 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Fkbp5Q64378 456 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Tmem266Q8BZB3 538 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 OptnQ8K3K8 584 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Ehd4Q9EQP2 541 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Robo1O89026 1612 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Dnajc21E9Q8D0 531 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Cplx2P84086 134 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Sdad1Q80UZ2 687 aaKnown RBP20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Vipas39Q8BGQ1 491 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Dnajc10Q9DC23 793 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 SyncQ9EPM5 470 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 TefQ9JLC6 301 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Nfu1Q9QZ23 255 aa20.16■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 A0A0U1RNP2 1173 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Rnaseh1O70338 285 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 DymQ8CHY3 669 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 BbxQ8VBW5 907 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Mical1Q8VDP3 1048 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Prpf6Q91YR7 941 aaKnown RBP20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Pdzd9Q9D9M4 266 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Pdcd6ipQ9WU78 869 aaKnown RBP20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Nfat5Q9WV30 1534 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Cnbd1B1AWM0 430 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Rexo5D3YW29 759 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Zbtb21E9Q444 1094 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Me1P06801 572 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Pbx1P41778 430 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 AvenQ9D9K3 342 aa20.15■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Tpm3-rs7D3Z2H9 248 aa20.14■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Acad12D3Z7X0 555 aa20.14■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Asap2Q7SIG6 958 aa20.14■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Usp27Q8CEG8 438 aa20.14■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Bola3Q8CEI1 110 aa20.14■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Kcnq3Q8K3F6 873 aa20.14■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Cnot6lQ8VEG6 555 aa20.14■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Gsdma2Q32M21 443 aa20.14■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Cct6bQ61390 531 aa20.14■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Osbpl1aQ91XL9 950 aa20.14■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Gigyf1Q99MR1 1044 aaKnown RBP20.14■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 AtrnQ9WU60 1428 aa20.14■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Slc4a1P04919 929 aa20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Top1Q04750 767 aaKnown RBP20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Prdm1Q60636 856 aa20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Olfr119Q7TRJ5 321 aa20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Zfp446Q8C9M8 523 aa20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Pde5aQ8CG03 865 aa20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Pcdha7Q91Y13 937 aa20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 TnksQ6PFX9 1320 aa20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Nkx2-5P42582 318 aa20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Ift122Q6NWV3 1182 aa20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 AdarQ99MU3 1178 aaKnown RBP20.13■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Ampd3O08739 766 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Akap2O54931 893 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Gucy2cQ3UWA6 1072 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Ice2Q3UZ18 988 aaKnown RBP20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Ncoa4Q5U4H9 625 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 C2cd2E9Q3C1 696 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Pex1Q5BL07 1284 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Ctdp1Q7TSG2 960 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Trim6Q8BGE7 488 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Phc3Q8CHP6 981 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Sash3Q8K352 380 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 CerkQ8K4Q7 531 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 Tab2Q99K90 693 aa20.12■□□□□ 0.81
Sqstm1-201ENSMUST00000015981 ErmnQ5EBJ4 281 aa20.11■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms