RNA–Protein interactions for RNA: tP(AGG)N

SUF10, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene SUF10, Length 72 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUF10tP(AGG)N MET5P47169 1442 aa18.67■□□□□ 0.58
SUF10tP(AGG)N NTE1Q04958 1679 aa18.66■□□□□ 0.58
SUF10tP(AGG)N PDR15Q04182 1529 aaKnown RBP18.64■□□□□ 0.58
SUF10tP(AGG)N SNT2P53127 1403 aa18.61■□□□□ 0.57
SUF10tP(AGG)N RPO21P04050 1733 aaKnown RBP18.58■□□□□ 0.57
SUF10tP(AGG)N NUP159P40477 1460 aa18.58■□□□□ 0.56
SUF10tP(AGG)N RTT106P40161 455 aa18.57■□□□□ 0.56
SUF10tP(AGG)N ULS1Q08562 1619 aa18.56■□□□□ 0.56
SUF10tP(AGG)N IFH1P39520 1085 aa18.51■□□□□ 0.55
SUF10tP(AGG)N GEA2P39993 1459 aaKnown RBP18.5■□□□□ 0.55
SUF10tP(AGG)N GEA1P47102 1408 aaPredicted RBP18.48■□□□□ 0.55
SUF10tP(AGG)N MET10P39692 1035 aa18.37■□□□□ 0.53
SUF10tP(AGG)N YRF1-1P0CX20 1796 aa18.35■□□□□ 0.53
SUF10tP(AGG)N YRF1-5P0CX21 1796 aa18.35■□□□□ 0.53
SUF10tP(AGG)N YRF1-8P0CX22 1796 aa18.35■□□□□ 0.53
SUF10tP(AGG)N VPS15P22219 1454 aa18.33■□□□□ 0.53
SUF10tP(AGG)N IRC20Q06554 1556 aa18.33■□□□□ 0.52
SUF10tP(AGG)N LTE1P07866 1435 aa18.3■□□□□ 0.52
SUF10tP(AGG)N CAT8P39113 1433 aa18.3■□□□□ 0.52
SUF10tP(AGG)N PDR12Q02785 1511 aa18.29■□□□□ 0.52
SUF10tP(AGG)N IKI3Q06706 1349 aaKnown RBP18.27■□□□□ 0.52
SUF10tP(AGG)N SPO14P36126 1683 aa18.21■□□□□ 0.51
SUF10tP(AGG)N TY3B-GQ99315 1547 aa18.2■□□□□ 0.5
SUF10tP(AGG)N GDB1Q06625 1536 aa18.19■□□□□ 0.5
SUF10tP(AGG)N YBT1P32386 1661 aa18.18■□□□□ 0.5
SUF10tP(AGG)N NUP157P40064 1391 aaKnown RBP18.17■□□□□ 0.5
SUF10tP(AGG)N PDR10P51533 1564 aa18.13■□□□□ 0.49
SUF10tP(AGG)N NUP170P38181 1502 aa18.11■□□□□ 0.49
SUF10tP(AGG)N BUD3P25558 1636 aa18.06■□□□□ 0.48
SUF10tP(AGG)N IQG1Q12280 1495 aa18.05■□□□□ 0.48
SUF10tP(AGG)N DRS2P39524 1355 aa18.03■□□□□ 0.48
SUF10tP(AGG)N ARO1P08566 1588 aaKnown RBP18■□□□□ 0.47
SUF10tP(AGG)N CKB1P43639 278 aa18■□□□□ 0.47
SUF10tP(AGG)N SRB8P25648 1427 aa17.98■□□□□ 0.47
SUF10tP(AGG)N SSM4P40318 1319 aa17.93■□□□□ 0.46
SUF10tP(AGG)N TRM3Q07527 1436 aa17.91■□□□□ 0.46
SUF10tP(AGG)N MMS1Q06211 1407 aa17.87■□□□□ 0.45
SUF10tP(AGG)N DOP1Q03921 1698 aa17.84■□□□□ 0.45
SUF10tP(AGG)N YSP2Q06681 1438 aa17.84■□□□□ 0.45
SUF10tP(AGG)N ITT1Q04638 464 aa17.83■□□□□ 0.44
SUF10tP(AGG)N BNI1P41832 1953 aa17.81■□□□□ 0.44
SUF10tP(AGG)N SEC7P11075 2009 aaKnown RBP17.79■□□□□ 0.44
SUF10tP(AGG)N BUD21Q08492 214 aaPredicted RBP17.79■□□□□ 0.44
SUF10tP(AGG)N BNR1P40450 1375 aa17.77■□□□□ 0.43
SUF10tP(AGG)N CHC1P22137 1653 aaKnown RBP17.7■□□□□ 0.42
SUF10tP(AGG)N GCN2P15442 1659 aa17.62■□□□□ 0.41
SUF10tP(AGG)N URN1Q06525 465 aaKnown RBP17.49■□□□□ 0.39
SUF10tP(AGG)N DNF2Q12675 1612 aa17.49■□□□□ 0.39
SUF10tP(AGG)N PAF1P38351 445 aa17.44■□□□□ 0.38
SUF10tP(AGG)N YOR093CQ12275 1648 aa17.41■□□□□ 0.38
SUF10tP(AGG)N NOP7P53261 605 aaKnown RBP17.4■□□□□ 0.38
SUF10tP(AGG)N NUP188P52593 1655 aaKnown RBP17.38■□□□□ 0.37
SUF10tP(AGG)N PDR5P33302 1511 aaKnown RBP17.37■□□□□ 0.37
SUF10tP(AGG)N ABP1P15891 592 aaKnown RBP17.33■□□□□ 0.36
SUF10tP(AGG)N YAP3P38749 330 aa17.31■□□□□ 0.36
SUF10tP(AGG)N IML1P47170 1584 aa17.29■□□□□ 0.36
SUF10tP(AGG)N VMR1P38735 1592 aa17.28■□□□□ 0.36
SUF10tP(AGG)N BFR2Q06631 534 aaKnown RBP17.28■□□□□ 0.36
SUF10tP(AGG)N IPL1P38991 367 aa17.25■□□□□ 0.35
SUF10tP(AGG)N RAV1P47104 1357 aa17.21■□□□□ 0.35
SUF10tP(AGG)N HAP1P0CE41 1502 aa17.16■□□□□ 0.34
SUF10tP(AGG)N DNF3Q12674 1656 aa17.14■□□□□ 0.33
SUF10tP(AGG)N RTC1Q08281 1341 aa17.14■□□□□ 0.33
SUF10tP(AGG)N PDR11P40550 1411 aa17.13■□□□□ 0.33
SUF10tP(AGG)N TYS1P36421 394 aaKnown RBP17.11■□□□□ 0.33
SUF10tP(AGG)N POL5P39985 1022 aaKnown RBP17.04■□□□□ 0.32
SUF10tP(AGG)N ESL2P36168 1195 aa16.99■□□□□ 0.31
SUF10tP(AGG)N MAK10Q02197 733 aa16.97■□□□□ 0.31
SUF10tP(AGG)N SCT1P32784 759 aa16.94■□□□□ 0.3
SUF10tP(AGG)N MIF2P35201 549 aa16.93■□□□□ 0.3
SUF10tP(AGG)N TAF5P38129 798 aa16.9■□□□□ 0.3
SUF10tP(AGG)N NAP1P25293 417 aaKnown RBP16.88■□□□□ 0.29
SUF10tP(AGG)N NUP192P47054 1683 aa16.87■□□□□ 0.29
SUF10tP(AGG)N ALD4P46367 519 aaKnown RBP16.86■□□□□ 0.29
SUF10tP(AGG)N MRX12P47084 519 aa16.85■□□□□ 0.29
SUF10tP(AGG)N BCK1Q01389 1478 aa16.85■□□□□ 0.29
SUF10tP(AGG)N TY3B-IQ7LHG5 1498 aaKnown RBP16.84■□□□□ 0.29
SUF10tP(AGG)N TY1B-NL2Q99337 1749 aaKnown RBP16.79■□□□□ 0.28
SUF10tP(AGG)N KIP3P53086 805 aaKnown RBP16.78■□□□□ 0.28
SUF10tP(AGG)N RAD9P14737 1309 aa16.77■□□□□ 0.28
SUF10tP(AGG)N CAB1Q04430 367 aa16.76■□□□□ 0.27
SUF10tP(AGG)N ORC1P54784 914 aaPredicted RBP16.74■□□□□ 0.27
SUF10tP(AGG)N KRE5P22023 1365 aa16.73■□□□□ 0.27
SUF10tP(AGG)N TAF8Q03750 510 aa16.72■□□□□ 0.27
SUF10tP(AGG)N SPE2P21182 396 aa16.71■□□□□ 0.27
SUF10tP(AGG)N RIA1P53893 1110 aa16.71■□□□□ 0.27
SUF10tP(AGG)N YLR419WQ06698 1435 aaKnown RBP16.7■□□□□ 0.26
SUF10tP(AGG)N MHP1P43638 1398 aa16.7■□□□□ 0.26
SUF10tP(AGG)N CFT1Q06632 1357 aaKnown RBP16.7■□□□□ 0.26
SUF10tP(AGG)N YMR196WQ04336 1088 aa16.69■□□□□ 0.26
SUF10tP(AGG)N USO1P25386 1790 aa16.67■□□□□ 0.26
SUF10tP(AGG)N SEC3P33332 1336 aaKnown RBP16.66■□□□□ 0.26
SUF10tP(AGG)N YNR029CP53729 429 aaKnown RBP16.57■□□□□ 0.24
SUF10tP(AGG)N CHZ1P40019 153 aaPredicted RBP16.54■□□□□ 0.24
SUF10tP(AGG)N PDS5Q04264 1277 aa16.52■□□□□ 0.24
SUF10tP(AGG)N THI12P42883 340 aa16.47■□□□□ 0.23
SUF10tP(AGG)N THI5P43534 340 aa16.47■□□□□ 0.23
SUF10tP(AGG)N THI11P47183 340 aa16.47■□□□□ 0.23
SUF10tP(AGG)N THI13Q07748 340 aa16.47■□□□□ 0.23
SUF10tP(AGG)N RCM1P53972 490 aa16.46■□□□□ 0.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms