RNA–Protein interactions for RNA: tA(AGC)J

tA(AGC)J, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(AGC)J, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(AGC)JtA(AGC)J VTH2P40890 1549 aa13.72□□□□□ -0.21
tA(AGC)JtA(AGC)J GEA2P39993 1459 aaKnown RBP13.71□□□□□ -0.21
tA(AGC)JtA(AGC)J NTE1Q04958 1679 aa13.66□□□□□ -0.22
tA(AGC)JtA(AGC)J YTA7P40340 1379 aa13.65□□□□□ -0.22
tA(AGC)JtA(AGC)J VPS15P22219 1454 aa13.64□□□□□ -0.23
tA(AGC)JtA(AGC)J MYO4P32492 1471 aa13.64□□□□□ -0.23
tA(AGC)JtA(AGC)J RPO21P04050 1733 aaKnown RBP13.62□□□□□ -0.23
tA(AGC)JtA(AGC)J SNQ2P32568 1501 aaKnown RBP13.56□□□□□ -0.24
tA(AGC)JtA(AGC)J MIF2P35201 549 aa13.56□□□□□ -0.24
tA(AGC)JtA(AGC)J DRS2P39524 1355 aa13.55□□□□□ -0.24
tA(AGC)JtA(AGC)J SNT2P53127 1403 aa13.54□□□□□ -0.24
tA(AGC)JtA(AGC)J MMS1Q06211 1407 aa13.53□□□□□ -0.24
tA(AGC)JtA(AGC)J STH1P32597 1359 aa13.49□□□□□ -0.25
tA(AGC)JtA(AGC)J ABP1P15891 592 aaKnown RBP13.46□□□□□ -0.25
tA(AGC)JtA(AGC)J MET10P39692 1035 aa13.46□□□□□ -0.25
tA(AGC)JtA(AGC)J RTT106P40161 455 aa13.41□□□□□ -0.26
tA(AGC)JtA(AGC)J SPO14P36126 1683 aa13.38□□□□□ -0.27
tA(AGC)JtA(AGC)J NUP170P38181 1502 aa13.38□□□□□ -0.27
tA(AGC)JtA(AGC)J PDR12Q02785 1511 aa13.34□□□□□ -0.27
tA(AGC)JtA(AGC)J ULS1Q08562 1619 aa13.34□□□□□ -0.27
tA(AGC)JtA(AGC)J SAS10Q12136 610 aaPredicted RBP13.33□□□□□ -0.28
tA(AGC)JtA(AGC)J MLP2P40457 1679 aa13.31□□□□□ -0.28
tA(AGC)JtA(AGC)J PDR15Q04182 1529 aaKnown RBP13.27□□□□□ -0.29
tA(AGC)JtA(AGC)J IRC20Q06554 1556 aa13.27□□□□□ -0.29
tA(AGC)JtA(AGC)J DNF2Q12675 1612 aa13.27□□□□□ -0.29
tA(AGC)JtA(AGC)J NUP157P40064 1391 aaKnown RBP13.26□□□□□ -0.29
tA(AGC)JtA(AGC)J GDB1Q06625 1536 aa13.26□□□□□ -0.29
tA(AGC)JtA(AGC)J IQG1Q12280 1495 aa13.23□□□□□ -0.29
tA(AGC)JtA(AGC)J TAF7Q05021 590 aa13.19□□□□□ -0.3
tA(AGC)JtA(AGC)J DOP1Q03921 1698 aa13.18□□□□□ -0.3
tA(AGC)JtA(AGC)J PDR10P51533 1564 aa13.17□□□□□ -0.3
tA(AGC)JtA(AGC)J IFH1P39520 1085 aa13.17□□□□□ -0.3
tA(AGC)JtA(AGC)J TRM3Q07527 1436 aa13.15□□□□□ -0.3
tA(AGC)JtA(AGC)J YFR006WP43590 535 aa13.15□□□□□ -0.3
tA(AGC)JtA(AGC)J BUD3P25558 1636 aa13.12□□□□□ -0.31
tA(AGC)JtA(AGC)J GEA1P47102 1408 aaPredicted RBP13.06□□□□□ -0.32
tA(AGC)JtA(AGC)J ARO1P08566 1588 aaKnown RBP13.03□□□□□ -0.32
tA(AGC)JtA(AGC)J CAT8P39113 1433 aa13.02□□□□□ -0.33
tA(AGC)JtA(AGC)J TY3B-GQ99315 1547 aa13.02□□□□□ -0.33
tA(AGC)JtA(AGC)J CHC1P22137 1653 aaKnown RBP12.96□□□□□ -0.33
tA(AGC)JtA(AGC)J YBT1P32386 1661 aa12.96□□□□□ -0.33
tA(AGC)JtA(AGC)J CKB1P43639 278 aa12.94□□□□□ -0.34
tA(AGC)JtA(AGC)J YSP2Q06681 1438 aa12.93□□□□□ -0.34
tA(AGC)JtA(AGC)J SEC7P11075 2009 aaKnown RBP12.93□□□□□ -0.34
tA(AGC)JtA(AGC)J YOR093CQ12275 1648 aa12.92□□□□□ -0.34
tA(AGC)JtA(AGC)J BNR1P40450 1375 aa12.87□□□□□ -0.35
tA(AGC)JtA(AGC)J YAP3P38749 330 aa12.82□□□□□ -0.36
tA(AGC)JtA(AGC)J DNF3Q12674 1656 aa12.8□□□□□ -0.36
tA(AGC)JtA(AGC)J SRB8P25648 1427 aa12.72□□□□□ -0.37
tA(AGC)JtA(AGC)J MAK10Q02197 733 aa12.68□□□□□ -0.38
tA(AGC)JtA(AGC)J URN1Q06525 465 aaKnown RBP12.68□□□□□ -0.38
tA(AGC)JtA(AGC)J BUD21Q08492 214 aaPredicted RBP12.64□□□□□ -0.39
tA(AGC)JtA(AGC)J IPL1P38991 367 aa12.58□□□□□ -0.4
tA(AGC)JtA(AGC)J TYS1P36421 394 aaKnown RBP12.54□□□□□ -0.4
tA(AGC)JtA(AGC)J NUP188P52593 1655 aaKnown RBP12.52□□□□□ -0.4
tA(AGC)JtA(AGC)J IKI3Q06706 1349 aaKnown RBP12.5□□□□□ -0.41
tA(AGC)JtA(AGC)J USO1P25386 1790 aa12.5□□□□□ -0.41
tA(AGC)JtA(AGC)J VMR1P38735 1592 aa12.48□□□□□ -0.41
tA(AGC)JtA(AGC)J IML1P47170 1584 aa12.48□□□□□ -0.41
tA(AGC)JtA(AGC)J HAP1P0CE41 1502 aa12.46□□□□□ -0.42
tA(AGC)JtA(AGC)J SSM4P40318 1319 aa12.43□□□□□ -0.42
tA(AGC)JtA(AGC)J PDR5P33302 1511 aaKnown RBP12.42□□□□□ -0.42
tA(AGC)JtA(AGC)J THI12P42883 340 aa12.38□□□□□ -0.43
tA(AGC)JtA(AGC)J THI5P43534 340 aa12.38□□□□□ -0.43
tA(AGC)JtA(AGC)J THI11P47183 340 aa12.38□□□□□ -0.43
tA(AGC)JtA(AGC)J YMR196WQ04336 1088 aa12.38□□□□□ -0.43
tA(AGC)JtA(AGC)J THI13Q07748 340 aa12.38□□□□□ -0.43
tA(AGC)JtA(AGC)J TY1B-NL2Q99337 1749 aaKnown RBP12.34□□□□□ -0.43
tA(AGC)JtA(AGC)J PDR11P40550 1411 aa12.32□□□□□ -0.44
tA(AGC)JtA(AGC)J GCN2P15442 1659 aa12.26□□□□□ -0.45
tA(AGC)JtA(AGC)J KRE5P22023 1365 aa12.19□□□□□ -0.46
tA(AGC)JtA(AGC)J RIA1P53893 1110 aa12.17□□□□□ -0.46
tA(AGC)JtA(AGC)J CFT1Q06632 1357 aaKnown RBP12.16□□□□□ -0.46
tA(AGC)JtA(AGC)J MRX12P47084 519 aa12.15□□□□□ -0.46
tA(AGC)JtA(AGC)J RAV1P47104 1357 aa12.12□□□□□ -0.47
tA(AGC)JtA(AGC)J PAF1P38351 445 aa12.11□□□□□ -0.47
tA(AGC)JtA(AGC)J BCK1Q01389 1478 aa12.1□□□□□ -0.47
tA(AGC)JtA(AGC)J YNR029CP53729 429 aaKnown RBP12.1□□□□□ -0.47
tA(AGC)JtA(AGC)J CAB1Q04430 367 aa12.06□□□□□ -0.48
tA(AGC)JtA(AGC)J BFR2Q06631 534 aaKnown RBP12.06□□□□□ -0.48
tA(AGC)JtA(AGC)J YAH1Q12184 172 aaKnown RBP12.06□□□□□ -0.48
tA(AGC)JtA(AGC)J RAD9P14737 1309 aa12.06□□□□□ -0.48
tA(AGC)JtA(AGC)J PTP3P40048 928 aa12.05□□□□□ -0.48
tA(AGC)JtA(AGC)J ALD4P46367 519 aaKnown RBP12.04□□□□□ -0.48
tA(AGC)JtA(AGC)J RTC1Q08281 1341 aa12.04□□□□□ -0.48
tA(AGC)JtA(AGC)J NUP192P47054 1683 aa12.02□□□□□ -0.49
tA(AGC)JtA(AGC)J APP1P53933 587 aa12.01□□□□□ -0.49
tA(AGC)JtA(AGC)J NOP7P53261 605 aaKnown RBP11.96□□□□□ -0.49
tA(AGC)JtA(AGC)J TY3B-IQ7LHG5 1498 aaKnown RBP11.95□□□□□ -0.5
tA(AGC)JtA(AGC)J GLN1P32288 370 aaKnown RBP11.92□□□□□ -0.5
tA(AGC)JtA(AGC)J YIL055CP40523 627 aaKnown RBP11.91□□□□□ -0.5
tA(AGC)JtA(AGC)J REB1P21538 810 aa11.9□□□□□ -0.5
tA(AGC)JtA(AGC)J ENT1Q12518 454 aa11.87□□□□□ -0.51
tA(AGC)JtA(AGC)J TAF5P38129 798 aa11.86□□□□□ -0.51
tA(AGC)JtA(AGC)J TAF8Q03750 510 aa11.86□□□□□ -0.51
tA(AGC)JtA(AGC)J ESL2P36168 1195 aa11.84□□□□□ -0.51
tA(AGC)JtA(AGC)J NAP1P25293 417 aaKnown RBP11.82□□□□□ -0.52
tA(AGC)JtA(AGC)J ENV9Q08651 330 aa11.82□□□□□ -0.52
tA(AGC)JtA(AGC)J CPS1P27614 576 aa11.81□□□□□ -0.52
tA(AGC)JtA(AGC)J RCM1P53972 490 aa11.81□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms