RNA–Protein interactions for RNA: tA(AGC)H

tA(AGC)H, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(AGC)H, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(AGC)HtA(AGC)H VTH2P40890 1549 aa13.72□□□□□ -0.21
tA(AGC)HtA(AGC)H GEA2P39993 1459 aaKnown RBP13.71□□□□□ -0.21
tA(AGC)HtA(AGC)H NTE1Q04958 1679 aa13.66□□□□□ -0.22
tA(AGC)HtA(AGC)H YTA7P40340 1379 aa13.65□□□□□ -0.22
tA(AGC)HtA(AGC)H VPS15P22219 1454 aa13.64□□□□□ -0.23
tA(AGC)HtA(AGC)H MYO4P32492 1471 aa13.64□□□□□ -0.23
tA(AGC)HtA(AGC)H RPO21P04050 1733 aaKnown RBP13.62□□□□□ -0.23
tA(AGC)HtA(AGC)H SNQ2P32568 1501 aaKnown RBP13.56□□□□□ -0.24
tA(AGC)HtA(AGC)H MIF2P35201 549 aa13.56□□□□□ -0.24
tA(AGC)HtA(AGC)H DRS2P39524 1355 aa13.55□□□□□ -0.24
tA(AGC)HtA(AGC)H SNT2P53127 1403 aa13.54□□□□□ -0.24
tA(AGC)HtA(AGC)H MMS1Q06211 1407 aa13.53□□□□□ -0.24
tA(AGC)HtA(AGC)H STH1P32597 1359 aa13.49□□□□□ -0.25
tA(AGC)HtA(AGC)H ABP1P15891 592 aaKnown RBP13.46□□□□□ -0.25
tA(AGC)HtA(AGC)H MET10P39692 1035 aa13.46□□□□□ -0.25
tA(AGC)HtA(AGC)H RTT106P40161 455 aa13.41□□□□□ -0.26
tA(AGC)HtA(AGC)H SPO14P36126 1683 aa13.38□□□□□ -0.27
tA(AGC)HtA(AGC)H NUP170P38181 1502 aa13.38□□□□□ -0.27
tA(AGC)HtA(AGC)H PDR12Q02785 1511 aa13.34□□□□□ -0.27
tA(AGC)HtA(AGC)H ULS1Q08562 1619 aa13.34□□□□□ -0.27
tA(AGC)HtA(AGC)H SAS10Q12136 610 aaPredicted RBP13.33□□□□□ -0.28
tA(AGC)HtA(AGC)H MLP2P40457 1679 aa13.31□□□□□ -0.28
tA(AGC)HtA(AGC)H PDR15Q04182 1529 aaKnown RBP13.27□□□□□ -0.29
tA(AGC)HtA(AGC)H IRC20Q06554 1556 aa13.27□□□□□ -0.29
tA(AGC)HtA(AGC)H DNF2Q12675 1612 aa13.27□□□□□ -0.29
tA(AGC)HtA(AGC)H NUP157P40064 1391 aaKnown RBP13.26□□□□□ -0.29
tA(AGC)HtA(AGC)H GDB1Q06625 1536 aa13.26□□□□□ -0.29
tA(AGC)HtA(AGC)H IQG1Q12280 1495 aa13.23□□□□□ -0.29
tA(AGC)HtA(AGC)H TAF7Q05021 590 aa13.19□□□□□ -0.3
tA(AGC)HtA(AGC)H DOP1Q03921 1698 aa13.18□□□□□ -0.3
tA(AGC)HtA(AGC)H PDR10P51533 1564 aa13.17□□□□□ -0.3
tA(AGC)HtA(AGC)H IFH1P39520 1085 aa13.17□□□□□ -0.3
tA(AGC)HtA(AGC)H TRM3Q07527 1436 aa13.15□□□□□ -0.3
tA(AGC)HtA(AGC)H YFR006WP43590 535 aa13.15□□□□□ -0.3
tA(AGC)HtA(AGC)H BUD3P25558 1636 aa13.12□□□□□ -0.31
tA(AGC)HtA(AGC)H GEA1P47102 1408 aaPredicted RBP13.06□□□□□ -0.32
tA(AGC)HtA(AGC)H ARO1P08566 1588 aaKnown RBP13.03□□□□□ -0.32
tA(AGC)HtA(AGC)H CAT8P39113 1433 aa13.02□□□□□ -0.33
tA(AGC)HtA(AGC)H TY3B-GQ99315 1547 aa13.02□□□□□ -0.33
tA(AGC)HtA(AGC)H CHC1P22137 1653 aaKnown RBP12.96□□□□□ -0.33
tA(AGC)HtA(AGC)H YBT1P32386 1661 aa12.96□□□□□ -0.33
tA(AGC)HtA(AGC)H CKB1P43639 278 aa12.94□□□□□ -0.34
tA(AGC)HtA(AGC)H YSP2Q06681 1438 aa12.93□□□□□ -0.34
tA(AGC)HtA(AGC)H SEC7P11075 2009 aaKnown RBP12.93□□□□□ -0.34
tA(AGC)HtA(AGC)H YOR093CQ12275 1648 aa12.92□□□□□ -0.34
tA(AGC)HtA(AGC)H BNR1P40450 1375 aa12.87□□□□□ -0.35
tA(AGC)HtA(AGC)H YAP3P38749 330 aa12.82□□□□□ -0.36
tA(AGC)HtA(AGC)H DNF3Q12674 1656 aa12.8□□□□□ -0.36
tA(AGC)HtA(AGC)H SRB8P25648 1427 aa12.72□□□□□ -0.37
tA(AGC)HtA(AGC)H MAK10Q02197 733 aa12.68□□□□□ -0.38
tA(AGC)HtA(AGC)H URN1Q06525 465 aaKnown RBP12.68□□□□□ -0.38
tA(AGC)HtA(AGC)H BUD21Q08492 214 aaPredicted RBP12.64□□□□□ -0.39
tA(AGC)HtA(AGC)H IPL1P38991 367 aa12.58□□□□□ -0.4
tA(AGC)HtA(AGC)H TYS1P36421 394 aaKnown RBP12.54□□□□□ -0.4
tA(AGC)HtA(AGC)H NUP188P52593 1655 aaKnown RBP12.52□□□□□ -0.4
tA(AGC)HtA(AGC)H IKI3Q06706 1349 aaKnown RBP12.5□□□□□ -0.41
tA(AGC)HtA(AGC)H USO1P25386 1790 aa12.5□□□□□ -0.41
tA(AGC)HtA(AGC)H VMR1P38735 1592 aa12.48□□□□□ -0.41
tA(AGC)HtA(AGC)H IML1P47170 1584 aa12.48□□□□□ -0.41
tA(AGC)HtA(AGC)H HAP1P0CE41 1502 aa12.46□□□□□ -0.42
tA(AGC)HtA(AGC)H SSM4P40318 1319 aa12.43□□□□□ -0.42
tA(AGC)HtA(AGC)H PDR5P33302 1511 aaKnown RBP12.42□□□□□ -0.42
tA(AGC)HtA(AGC)H THI12P42883 340 aa12.38□□□□□ -0.43
tA(AGC)HtA(AGC)H THI5P43534 340 aa12.38□□□□□ -0.43
tA(AGC)HtA(AGC)H THI11P47183 340 aa12.38□□□□□ -0.43
tA(AGC)HtA(AGC)H YMR196WQ04336 1088 aa12.38□□□□□ -0.43
tA(AGC)HtA(AGC)H THI13Q07748 340 aa12.38□□□□□ -0.43
tA(AGC)HtA(AGC)H TY1B-NL2Q99337 1749 aaKnown RBP12.34□□□□□ -0.43
tA(AGC)HtA(AGC)H PDR11P40550 1411 aa12.32□□□□□ -0.44
tA(AGC)HtA(AGC)H GCN2P15442 1659 aa12.26□□□□□ -0.45
tA(AGC)HtA(AGC)H KRE5P22023 1365 aa12.19□□□□□ -0.46
tA(AGC)HtA(AGC)H RIA1P53893 1110 aa12.17□□□□□ -0.46
tA(AGC)HtA(AGC)H CFT1Q06632 1357 aaKnown RBP12.16□□□□□ -0.46
tA(AGC)HtA(AGC)H MRX12P47084 519 aa12.15□□□□□ -0.46
tA(AGC)HtA(AGC)H RAV1P47104 1357 aa12.12□□□□□ -0.47
tA(AGC)HtA(AGC)H PAF1P38351 445 aa12.11□□□□□ -0.47
tA(AGC)HtA(AGC)H BCK1Q01389 1478 aa12.1□□□□□ -0.47
tA(AGC)HtA(AGC)H YNR029CP53729 429 aaKnown RBP12.1□□□□□ -0.47
tA(AGC)HtA(AGC)H CAB1Q04430 367 aa12.06□□□□□ -0.48
tA(AGC)HtA(AGC)H BFR2Q06631 534 aaKnown RBP12.06□□□□□ -0.48
tA(AGC)HtA(AGC)H YAH1Q12184 172 aaKnown RBP12.06□□□□□ -0.48
tA(AGC)HtA(AGC)H RAD9P14737 1309 aa12.06□□□□□ -0.48
tA(AGC)HtA(AGC)H PTP3P40048 928 aa12.05□□□□□ -0.48
tA(AGC)HtA(AGC)H ALD4P46367 519 aaKnown RBP12.04□□□□□ -0.48
tA(AGC)HtA(AGC)H RTC1Q08281 1341 aa12.04□□□□□ -0.48
tA(AGC)HtA(AGC)H NUP192P47054 1683 aa12.02□□□□□ -0.49
tA(AGC)HtA(AGC)H APP1P53933 587 aa12.01□□□□□ -0.49
tA(AGC)HtA(AGC)H NOP7P53261 605 aaKnown RBP11.96□□□□□ -0.49
tA(AGC)HtA(AGC)H TY3B-IQ7LHG5 1498 aaKnown RBP11.95□□□□□ -0.5
tA(AGC)HtA(AGC)H GLN1P32288 370 aaKnown RBP11.92□□□□□ -0.5
tA(AGC)HtA(AGC)H YIL055CP40523 627 aaKnown RBP11.91□□□□□ -0.5
tA(AGC)HtA(AGC)H REB1P21538 810 aa11.9□□□□□ -0.5
tA(AGC)HtA(AGC)H ENT1Q12518 454 aa11.87□□□□□ -0.51
tA(AGC)HtA(AGC)H TAF5P38129 798 aa11.86□□□□□ -0.51
tA(AGC)HtA(AGC)H TAF8Q03750 510 aa11.86□□□□□ -0.51
tA(AGC)HtA(AGC)H ESL2P36168 1195 aa11.84□□□□□ -0.51
tA(AGC)HtA(AGC)H NAP1P25293 417 aaKnown RBP11.82□□□□□ -0.52
tA(AGC)HtA(AGC)H ENV9Q08651 330 aa11.82□□□□□ -0.52
tA(AGC)HtA(AGC)H CPS1P27614 576 aa11.81□□□□□ -0.52
tA(AGC)HtA(AGC)H RCM1P53972 490 aa11.81□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 80.3 ms