RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeastyeast

Gene snR19, Length 568 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR19snR19 SPB4P25808 606 aaPredicted RBP8.74□□□□□ -1.01
snR19snR19 VNX1P42839 908 aa8.74□□□□□ -1.01
snR19snR19 DCW1P36091 449 aa8.73□□□□□ -1.01
snR19snR19 REF2P42073 533 aaPredicted RBP8.73□□□□□ -1.01
snR19snR19 SPA2P23201 1466 aaKnown RBP8.72□□□□□ -1.01
snR19snR19 PBS2P08018 668 aa8.71□□□□□ -1.02
snR19snR19 HTA1P04911 132 aaKnown RBP8.7□□□□□ -1.02
snR19snR19 HTA2P04912 132 aa8.7□□□□□ -1.02
snR19snR19 EAP1P36041 632 aaKnown RBP8.69□□□□□ -1.02
snR19snR19 SOL3P38858 249 aa8.69□□□□□ -1.02
snR19snR19 YGR273CP53329 174 aa8.68□□□□□ -1.02
snR19snR19 DSF2P38213 736 aa8.67□□□□□ -1.02
snR19snR19 TIF11P38912 153 aaKnown RBP8.67□□□□□ -1.02
snR19snR19 SPP1Q03012 353 aa8.66□□□□□ -1.02
snR19snR19 BUD31P25337 157 aaPredicted RBP8.65□□□□□ -1.02
snR19snR19 VHR2P40041 505 aa8.65□□□□□ -1.02
snR19snR19 NST1P53935 1240 aa8.65□□□□□ -1.02
snR19snR19 TRP5P00931 707 aaKnown RBP8.64□□□□□ -1.03
snR19snR19 UBP14P38237 781 aaKnown RBP8.64□□□□□ -1.03
snR19snR19 ULI1P43604 169 aa8.63□□□□□ -1.03
snR19snR19 MAK21Q12176 1025 aaKnown RBP8.63□□□□□ -1.03
snR19snR19 YLR326WQ06170 240 aaKnown RBP8.62□□□□□ -1.03
snR19snR19 COX6P00427 148 aa8.61□□□□□ -1.03
snR19snR19 LEO1P38439 464 aa8.61□□□□□ -1.03
snR19snR19 YEL023CP39992 682 aa8.6□□□□□ -1.03
snR19snR19 YDR090CQ03193 310 aa8.6□□□□□ -1.03
snR19snR19 KEX1P09620 729 aa8.59□□□□□ -1.03
snR19snR19 IOC2Q12072 812 aa8.59□□□□□ -1.03
snR19snR19 MAM3Q12296 706 aa8.59□□□□□ -1.03
snR19snR19 HSL1P34244 1518 aa8.59□□□□□ -1.03
snR19snR19 MPH3P0CE00 602 aa8.58□□□□□ -1.04
snR19snR19 AI4P03878 556 aa8.57□□□□□ -1.04
snR19snR19 SPT6P23615 1451 aaKnown RBP8.57□□□□□ -1.04
snR19snR19 PTC4P38089 393 aa8.56□□□□□ -1.04
snR19snR19 JIP4Q03361 876 aa8.56□□□□□ -1.04
snR19snR19 ILV3P39522 585 aaKnown RBP8.55□□□□□ -1.04
snR19snR19 RAD54P32863 898 aa8.54□□□□□ -1.04
snR19snR19 PCS60P38137 543 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
snR19snR19 KIC1P38692 1080 aa8.54□□□□□ -1.04
snR19snR19 IES2P40154 320 aa8.54□□□□□ -1.04
snR19snR19 ECM5Q03214 1411 aa8.54□□□□□ -1.04
snR19snR19 RPN1P38764 993 aaKnown RBP8.53□□□□□ -1.04
snR19snR19 DAN4P47179 1161 aa8.52□□□□□ -1.05
snR19snR19 LDB19Q12502 818 aa8.52□□□□□ -1.05
snR19snR19 NUP42P49686 430 aaKnown RBP8.51□□□□□ -1.05
snR19snR19 YNL035CP53962 389 aaKnown RBP8.51□□□□□ -1.05
snR19snR19 SGS1P35187 1447 aa8.51□□□□□ -1.05
snR19snR19 RTG1P32607 177 aa8.48□□□□□ -1.05
snR19snR19 YNR021WP53723 404 aaKnown RBP8.48□□□□□ -1.05
snR19snR19 DIT2P21595 489 aa8.47□□□□□ -1.05
snR19snR19 SEC61P32915 480 aa8.45□□□□□ -1.06
snR19snR19 SLI15P38283 698 aa8.45□□□□□ -1.06
snR19snR19 MDS3P53094 1487 aa8.4□□□□□ -1.06
snR19snR19 GLC3P32775 704 aa8.4□□□□□ -1.06
snR19snR19 ORC6P38826 435 aa8.4□□□□□ -1.06
snR19snR19 PML39Q03760 334 aa8.4□□□□□ -1.06
snR19snR19 NCR1Q12200 1170 aa8.4□□□□□ -1.06
snR19snR19 BUD4P47136 1447 aa8.39□□□□□ -1.07
snR19snR19 FKH1P40466 484 aa8.39□□□□□ -1.07
snR19snR19 THO2P53552 1597 aaKnown RBP8.39□□□□□ -1.07
snR19snR19 PSE1P32337 1089 aaKnown RBP8.38□□□□□ -1.07
snR19snR19 HIR3P47171 1648 aa8.37□□□□□ -1.07
snR19snR19 MID1P41821 548 aa8.37□□□□□ -1.07
snR19snR19 TFG1P41895 735 aaPredicted RBP8.37□□□□□ -1.07
snR19snR19 AIM7Q12156 149 aa8.37□□□□□ -1.07
snR19snR19 RPP1BP10622 106 aaKnown RBP8.35□□□□□ -1.07
snR19snR19 CDC73Q06697 393 aa8.35□□□□□ -1.07
snR19snR19 GAP1P19145 602 aaPredicted RBP8.34□□□□□ -1.07
snR19snR19 YDL129WQ07555 291 aa8.34□□□□□ -1.07
snR19snR19 SIS1P25294 352 aaKnown RBP8.33□□□□□ -1.08
snR19snR19 ATF2P53296 535 aa8.33□□□□□ -1.08
snR19snR19 AIR2Q12476 344 aaKnown RBP8.33□□□□□ -1.08
snR19snR19 KIN1P13185 1064 aa8.32□□□□□ -1.08
snR19snR19 RGR1P19263 1082 aa8.31□□□□□ -1.08
snR19snR19 DPL1Q05567 589 aa8.31□□□□□ -1.08
snR19snR19 CSC1Q06538 782 aa8.31□□□□□ -1.08
snR19snR19 MPC54Q08550 464 aa8.31□□□□□ -1.08
snR19snR19 REV3P14284 1504 aa8.3□□□□□ -1.08
snR19snR19 MVP1P40959 511 aaKnown RBP8.3□□□□□ -1.08
snR19snR19 PEX29Q03370 554 aa8.3□□□□□ -1.08
snR19snR19 TFB4Q12004 338 aa8.27□□□□□ -1.09
snR19snR19 SAP30P38429 201 aa8.26□□□□□ -1.09
snR19snR19 PEX21P50091 288 aa8.25□□□□□ -1.09
snR19snR19 PEP1P32319 1579 aa8.25□□□□□ -1.09
snR19snR19 TEA1P47988 759 aa8.24□□□□□ -1.09
snR19snR19 NMA111P53920 997 aa8.24□□□□□ -1.09
snR19snR19 ISU2Q12056 156 aa8.24□□□□□ -1.09
snR19snR19 CLB5P30283 435 aa8.23□□□□□ -1.09
snR19snR19 YPR109WQ06104 294 aa8.23□□□□□ -1.09
snR19snR19 ARH1P48360 493 aa8.2□□□□□ -1.1
snR19snR19 TUM1Q08686 304 aaKnown RBP8.2□□□□□ -1.1
snR19snR19 BMT6Q12291 365 aa8.2□□□□□ -1.1
snR19snR19 BPT1P14772 1559 aa8.19□□□□□ -1.1
snR19snR19 YJL171CP46992 396 aa8.19□□□□□ -1.1
snR19snR19 HAP5Q02516 242 aa8.19□□□□□ -1.1
snR19snR19 YDR344CQ05510 147 aa8.19□□□□□ -1.1
snR19snR19 YRR1Q12172 810 aa8.18□□□□□ -1.1
snR19snR19 XRN1P22147 1528 aaKnown RBP8.16□□□□□ -1.1
snR19snR19 ATG2P53855 1592 aa8.16□□□□□ -1.1
snR19snR19 GUA1P38625 525 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms