RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	BMT6	Q12291	365 aa		7.37	□□□□□ -1.23
CMR3	YPR013C	EAP1	P36041	632 aa	Known RBP	7.36	□□□□□ -1.23
CMR3	YPR013C	RTG1	P32607	177 aa		7.35	□□□□□ -1.23
CMR3	YPR013C	DSF2	P38213	736 aa		7.3	□□□□□ -1.24
CMR3	YPR013C	YNL035C	P53962	389 aa	Known RBP	7.3	□□□□□ -1.24
CMR3	YPR013C	ABP1	P15891	592 aa	Known RBP	7.29	□□□□□ -1.24
CMR3	YPR013C	SEC61	P32915	480 aa		7.28	□□□□□ -1.24
CMR3	YPR013C	DAN4	P47179	1161 aa		7.28	□□□□□ -1.24
CMR3	YPR013C	NCR1	Q12200	1170 aa		7.28	□□□□□ -1.24
CMR3	YPR013C	PBS2	P08018	668 aa		7.27	□□□□□ -1.25
CMR3	YPR013C	MAK11	P20484	414 aa	Known RBP	7.26	□□□□□ -1.25
CMR3	YPR013C	YNR021W	P53723	404 aa	Known RBP	7.25	□□□□□ -1.25
CMR3	YPR013C	KIN1	P13185	1064 aa		7.24	□□□□□ -1.25
CMR3	YPR013C	HGH1	P48362	394 aa	Known RBP	7.23	□□□□□ -1.25
CMR3	YPR013C	RGA2	Q06407	1009 aa		7.23	□□□□□ -1.25
CMR3	YPR013C	GYP5	Q12344	894 aa		7.19	□□□□□ -1.26
CMR3	YPR013C	COQ8	P27697	501 aa		7.17	□□□□□ -1.26
CMR3	YPR013C	AIM7	Q12156	149 aa		7.17	□□□□□ -1.26
CMR3	YPR013C	MAM3	Q12296	706 aa		7.17	□□□□□ -1.26
CMR3	YPR013C	JIP4	Q03361	876 aa		7.16	□□□□□ -1.26
CMR3	YPR013C	GLC3	P32775	704 aa		7.15	□□□□□ -1.26
CMR3	YPR013C	NOP53	Q12080	455 aa	Known RBP	7.15	□□□□□ -1.26
CMR3	YPR013C	YDR344C	Q05510	147 aa		7.14	□□□□□ -1.27
CMR3	YPR013C	DCW1	P36091	449 aa		7.13	□□□□□ -1.27
CMR3	YPR013C	SAP30	P38429	201 aa		7.13	□□□□□ -1.27
CMR3	YPR013C	REF2	P42073	533 aa	Predicted RBP	7.13	□□□□□ -1.27
CMR3	YPR013C	HTA1	P04911	132 aa	Known RBP	7.12	□□□□□ -1.27
CMR3	YPR013C	HTA2	P04912	132 aa		7.12	□□□□□ -1.27
CMR3	YPR013C	IES2	P40154	320 aa		7.12	□□□□□ -1.27
CMR3	YPR013C	YDL129W	Q07555	291 aa		7.12	□□□□□ -1.27
CMR3	YPR013C	YEL023C	P39992	682 aa		7.11	□□□□□ -1.27
CMR3	YPR013C	EDS1	P38073	919 aa		7.1	□□□□□ -1.27
CMR3	YPR013C	NST1	P53935	1240 aa		7.1	□□□□□ -1.27
CMR3	YPR013C	DIT2	P21595	489 aa		7.09	□□□□□ -1.27
CMR3	YPR013C	PTC4	P38089	393 aa		7.09	□□□□□ -1.27
CMR3	YPR013C	NUP42	P49686	430 aa	Known RBP	7.09	□□□□□ -1.27
CMR3	YPR013C	MAK21	Q12176	1025 aa	Known RBP	7.09	□□□□□ -1.27
CMR3	YPR013C	GUA1	P38625	525 aa	Known RBP	7.07	□□□□□ -1.28
CMR3	YPR013C	MIF2	P35201	549 aa		7.06	□□□□□ -1.28
CMR3	YPR013C	ATF2	P53296	535 aa		7.06	□□□□□ -1.28
CMR3	YPR013C	PRE3	P38624	215 aa		7.05	□□□□□ -1.28
CMR3	YPR013C	CHL1	P22516	861 aa	Predicted RBP	7.04	□□□□□ -1.28
CMR3	YPR013C	TFG1	P41895	735 aa	Predicted RBP	7.04	□□□□□ -1.28
CMR3	YPR013C	COX6	P00427	148 aa		7.03	□□□□□ -1.28
CMR3	YPR013C	BCK2	P33306	851 aa		7.03	□□□□□ -1.28
CMR3	YPR013C	PTC3	P34221	468 aa	Known RBP	7.02	□□□□□ -1.29
CMR3	YPR013C	SOL3	P38858	249 aa		7.02	□□□□□ -1.29
CMR3	YPR013C	HPC2	Q01448	625 aa		7.02	□□□□□ -1.29
CMR3	YPR013C	GRE2	Q12068	342 aa	Known RBP	7.02	□□□□□ -1.29
CMR3	YPR013C	ILV3	P39522	585 aa	Known RBP	6.98	□□□□□ -1.29
CMR3	YPR013C	PML39	Q03760	334 aa		6.97	□□□□□ -1.29
CMR3	YPR013C	GUT1	P32190	709 aa		6.96	□□□□□ -1.3
CMR3	YPR013C	TFB3	Q03290	321 aa		6.96	□□□□□ -1.3
CMR3	YPR013C	BRL1	P38770	471 aa		6.94	□□□□□ -1.3
CMR3	YPR013C	MID1	P41821	548 aa		6.92	□□□□□ -1.3
CMR3	YPR013C	ATH1	P48016	1211 aa		6.92	□□□□□ -1.3
CMR3	YPR013C	SSA2	P10592	639 aa	Known RBP	6.9	□□□□□ -1.3
CMR3	YPR013C	MPH3	P0CE00	602 aa		6.89	□□□□□ -1.31
CMR3	YPR013C	ARH1	P48360	493 aa		6.89	□□□□□ -1.31
CMR3	YPR013C	YML020W	Q03722	664 aa		6.89	□□□□□ -1.31
CMR3	YPR013C	SSA1	P10591	642 aa	Known RBP	6.88	□□□□□ -1.31
CMR3	YPR013C	VRP1	P37370	817 aa		6.88	□□□□□ -1.31
CMR3	YPR013C	VHR2	P40041	505 aa		6.88	□□□□□ -1.31
CMR3	YPR013C	YDR090C	Q03193	310 aa		6.88	□□□□□ -1.31
CMR3	YPR013C	AI4	P03878	556 aa		6.87	□□□□□ -1.31
CMR3	YPR013C	PKC1	P24583	1151 aa		6.87	□□□□□ -1.31
CMR3	YPR013C	GEF1	P37020	779 aa		6.86	□□□□□ -1.31
CMR3	YPR013C	UBP14	P38237	781 aa	Known RBP	6.86	□□□□□ -1.31
CMR3	YPR013C	KIC1	P38692	1080 aa		6.86	□□□□□ -1.31
CMR3	YPR013C	XDJ1	P39102	459 aa		6.86	□□□□□ -1.31
CMR3	YPR013C	CSN12	P47130	423 aa		6.86	□□□□□ -1.31
CMR3	YPR013C	SUB2	Q07478	446 aa	Known RBP	6.86	□□□□□ -1.31
CMR3	YPR013C	SLX8	P40072	274 aa		6.85	□□□□□ -1.31
CMR3	YPR013C	ELP4	Q02884	456 aa	Known RBP	6.85	□□□□□ -1.31
CMR3	YPR013C	PSE1	P32337	1089 aa	Known RBP	6.84	□□□□□ -1.31
CMR3	YPR013C	NOP8	Q08287	484 aa	Predicted RBP	6.84	□□□□□ -1.31
CMR3	YPR013C	BIM1	P40013	344 aa		6.83	□□□□□ -1.32
CMR3	YPR013C	YJL007C	P47080	104 aa		6.83	□□□□□ -1.32
CMR3	YPR013C	YLR326W	Q06170	240 aa	Known RBP	6.83	□□□□□ -1.32
CMR3	YPR013C	YGR273C	P53329	174 aa		6.81	□□□□□ -1.32
CMR3	YPR013C	GLN1	P32288	370 aa	Known RBP	6.8	□□□□□ -1.32
CMR3	YPR013C	SSA4	P22202	642 aa	Known RBP	6.79	□□□□□ -1.32
CMR3	YPR013C	RAD54	P32863	898 aa		6.79	□□□□□ -1.32
CMR3	YPR013C	ATG32	P40458	529 aa		6.79	□□□□□ -1.32
CMR3	YPR013C	RPL34B	P40525	121 aa	Known RBP	6.78	□□□□□ -1.32
CMR3	YPR013C	PEX29	Q03370	554 aa		6.78	□□□□□ -1.32
CMR3	YPR013C	TEA1	P47988	759 aa		6.77	□□□□□ -1.33
CMR3	YPR013C	MPC54	Q08550	464 aa		6.77	□□□□□ -1.33
CMR3	YPR013C	SPT23	P35210	1082 aa		6.76	□□□□□ -1.33
CMR3	YPR013C	RGA1	P39083	1007 aa		6.76	□□□□□ -1.33
CMR3	YPR013C	AIM44	Q99299	758 aa		6.76	□□□□□ -1.33
CMR3	YPR013C	KEX1	P09620	729 aa		6.75	□□□□□ -1.33
CMR3	YPR013C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.75	□□□□□ -1.33	not detected
CMR3	YPR013C	HAP5	Q02516	242 aa		6.75	□□□□□ -1.33
CMR3	YPR013C	BNI4	P53858	892 aa		6.74	□□□□□ -1.33
CMR3	YPR013C	SRC1	Q03707	834 aa		6.74	□□□□□ -1.33
CMR3	YPR013C	TIF1	P10081	395 aa	Known RBP	6.73	□□□□□ -1.33
CMR3	YPR013C	KTR1	P27810	393 aa	Known RBP	6.73	□□□□□ -1.33
CMR3	YPR013C	YBL036C	P38197	257 aa		6.73	□□□□□ -1.33
CMR3	YPR013C	SLI15	P38283	698 aa		6.73	□□□□□ -1.33

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms