RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeastyeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRE1YPL176C REF2P42073 533 aaPredicted RBP6.43□□□□□ -1.38
TRE1YPL176C SNU71P53207 620 aaKnown RBP6.4□□□□□ -1.38
TRE1YPL176C GRE2Q12068 342 aaKnown RBP6.4□□□□□ -1.39
TRE1YPL176C GUT1P32190 709 aa6.39□□□□□ -1.39
TRE1YPL176C UBP14P38237 781 aaKnown RBP6.38□□□□□ -1.39
TRE1YPL176C SOL3P38858 249 aa6.38□□□□□ -1.39
TRE1YPL176C ATH1P48016 1211 aa6.38□□□□□ -1.39
TRE1YPL176C YDR090CQ03193 310 aa6.38□□□□□ -1.39
TRE1YPL176C NUP42P49686 430 aaKnown RBP6.37□□□□□ -1.39
TRE1YPL176C MAM3Q12296 706 aa6.37□□□□□ -1.39
TRE1YPL176C INO80P53115 1489 aa6.36□□□□□ -1.39
TRE1YPL176C COX6P00427 148 aa6.36□□□□□ -1.39
TRE1YPL176C NST1P53935 1240 aa6.36□□□□□ -1.39
TRE1YPL176C VHR2P40041 505 aa6.36□□□□□ -1.39
TRE1YPL176C IES2P40154 320 aa6.36□□□□□ -1.39
TRE1YPL176C GYP5Q12344 894 aa6.36□□□□□ -1.39
TRE1YPL176C SLX8P40072 274 aa6.35□□□□□ -1.39
TRE1YPL176C YLR326WQ06170 240 aaKnown RBP6.35□□□□□ -1.39
TRE1YPL176C YOL036WQ08206 761 aa6.35□□□□□ -1.39
TRE1YPL176C DIT2P21595 489 aa6.35□□□□□ -1.39
TRE1YPL176C YGR273CP53329 174 aa6.35□□□□□ -1.39
TRE1YPL176C MAK21Q12176 1025 aaKnown RBP6.34□□□□□ -1.39
TRE1YPL176C GTT3P39996 337 aa6.33□□□□□ -1.4
TRE1YPL176C YNR021WP53723 404 aaKnown RBP6.33□□□□□ -1.4
TRE1YPL176C SET4P42948 560 aa6.32□□□□□ -1.4
TRE1YPL176C GLC3P32775 704 aa6.31□□□□□ -1.4
TRE1YPL176C DCW1P36091 449 aa6.3□□□□□ -1.4
TRE1YPL176C KEX1P09620 729 aa6.29□□□□□ -1.4
TRE1YPL176C PCS60P38137 543 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
TRE1YPL176C BRL1P38770 471 aa6.29□□□□□ -1.4
TRE1YPL176C NOP7P53261 605 aaKnown RBP6.29□□□□□ -1.4
TRE1YPL176C ILV3P39522 585 aaKnown RBP6.28□□□□□ -1.4
TRE1YPL176C KIN1P13185 1064 aa6.28□□□□□ -1.4
TRE1YPL176C MSB4Q12317 492 aa6.27□□□□□ -1.41
TRE1YPL176C AIM7Q12156 149 aa6.26□□□□□ -1.41
TRE1YPL176C GEF1P37020 779 aa6.26□□□□□ -1.41
TRE1YPL176C WSC3Q12215 556 aa6.26□□□□□ -1.41
TRE1YPL176C YBL029C-AQ3E756 94 aa6.26□□□□□ -1.41
TRE1YPL176C HTA1P04911 132 aaKnown RBP6.25□□□□□ -1.41
TRE1YPL176C HTA2P04912 132 aa6.25□□□□□ -1.41
TRE1YPL176C ATG36P46983 293 aa6.25□□□□□ -1.41
TRE1YPL176C SSA1P10591 642 aaKnown RBP6.24□□□□□ -1.41
TRE1YPL176C MRX12P47084 519 aa6.24□□□□□ -1.41
TRE1YPL176C RAD54P32863 898 aa6.23□□□□□ -1.41
TRE1YPL176C AI4P03878 556 aa6.23□□□□□ -1.41
TRE1YPL176C MPH3P0CE00 602 aa6.23□□□□□ -1.41
TRE1YPL176C YEL023CP39992 682 aa6.23□□□□□ -1.41
TRE1YPL176C VNX1P42839 908 aa6.23□□□□□ -1.41
TRE1YPL176C SWE1P32944 819 aa6.22□□□□□ -1.41
TRE1YPL176C HGH1P48362 394 aaKnown RBP6.22□□□□□ -1.41
TRE1YPL176C ORC6P38826 435 aa6.21□□□□□ -1.42
TRE1YPL176C TRP5P00931 707 aaKnown RBP6.2□□□□□ -1.42
TRE1YPL176C KIC1P38692 1080 aa6.2□□□□□ -1.42
TRE1YPL176C NUG1P40010 520 aaKnown RBP6.2□□□□□ -1.42
TRE1YPL176C SUB2Q07478 446 aaKnown RBP6.2□□□□□ -1.42
TRE1YPL176C PAM1P37304 830 aaKnown RBP6.19□□□□□ -1.42
TRE1YPL176C LAM6Q08001 693 aa6.19□□□□□ -1.42
TRE1YPL176C DAN4P47179 1161 aa6.18□□□□□ -1.42
TRE1YPL176C SLI15P38283 698 aa6.18□□□□□ -1.42
TRE1YPL176C PSE1P32337 1089 aaKnown RBP6.17□□□□□ -1.42
TRE1YPL176C EAP1P36041 632 aaKnown RBP6.17□□□□□ -1.42
TRE1YPL176C PTC4P38089 393 aa6.17□□□□□ -1.42
TRE1YPL176C BRN1P38170 754 aa6.17□□□□□ -1.42
TRE1YPL176C GUA1P38625 525 aaKnown RBP6.17□□□□□ -1.42
TRE1YPL176C FAR11P53917 953 aa6.17□□□□□ -1.42
TRE1YPL176C MET10P39692 1035 aa6.16□□□□□ -1.42
TRE1YPL176C ATF2P53296 535 aa6.16□□□□□ -1.42
TRE1YPL176C GAP1P19145 602 aaPredicted RBP6.16□□□□□ -1.42
TRE1YPL176C TIF11P38912 153 aaKnown RBP6.16□□□□□ -1.42
TRE1YPL176C IOC2Q12072 812 aa6.16□□□□□ -1.42
TRE1YPL176C SPC42P36094 363 aa6.15□□□□□ -1.42
TRE1YPL176C YTA7P40340 1379 aa6.14□□□□□ -1.43
TRE1YPL176C ULI1P43604 169 aa6.14□□□□□ -1.43
TRE1YPL176C RGR1P19263 1082 aa6.14□□□□□ -1.43
TRE1YPL176C SPP1Q03012 353 aa6.13□□□□□ -1.43
TRE1YPL176C DOS2P54858 310 aa6.13□□□□□ -1.43
TRE1YPL176C MVP1P40959 511 aaKnown RBP6.12□□□□□ -1.43
TRE1YPL176C JIP4Q03361 876 aa6.12□□□□□ -1.43
TRE1YPL176C MDG1P53885 366 aa6.11□□□□□ -1.43
TRE1YPL176C RTS3P53289 263 aa6.11□□□□□ -1.43
TRE1YPL176C CDC73Q06697 393 aa6.11□□□□□ -1.43
TRE1YPL176C YFR016CP43597 1233 aaKnown RBP6.1□□□□□ -1.43
TRE1YPL176C RRN6P32786 894 aa6.1□□□□□ -1.43
TRE1YPL176C UBP9P39967 754 aa6.1□□□□□ -1.43
TRE1YPL176C GIN4Q12263 1142 aa6.1□□□□□ -1.43
TRE1YPL176C ASF1P32447 279 aa6.09□□□□□ -1.43
TRE1YPL176C KRI1P42846 591 aaKnown RBP6.09□□□□□ -1.43
TRE1YPL176C SUB1P54000 292 aaKnown RBP6.09□□□□□ -1.43
TRE1YPL176C MID1P41821 548 aa6.09□□□□□ -1.43
TRE1YPL176C YJR008WP47085 338 aa6.09□□□□□ -1.43
TRE1YPL176C SLD2P34252 453 aa6.08□□□□□ -1.44
TRE1YPL176C TPO2P53283 614 aa6.08□□□□□ -1.44
TRE1YPL176C VPS72Q03388 795 aa6.08□□□□□ -1.44
TRE1YPL176C DNA2P38859 1522 aa6.08□□□□□ -1.44
TRE1YPL176C LDB19Q12502 818 aa6.08□□□□□ -1.44
TRE1YPL176C KTR1P27810 393 aaKnown RBP6.07□□□□□ -1.44
TRE1YPL176C OCA5P38738 679 aa6.07□□□□□ -1.44
TRE1YPL176C TEA1P47988 759 aa6.07□□□□□ -1.44
TRE1YPL176C YNL035CP53962 389 aaKnown RBP6.07□□□□□ -1.44
TRE1YPL176C HPC2Q01448 625 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms