RNA–Protein interactions for RNA: YPL063W

TIM50, Transcript of Essential component of the TIM23 complex, yeastyeast

Gene TIM50, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM50YPL063W NTE1Q04958 1679 aa11.78□□□□□ -0.52
TIM50YPL063W TAF7Q05021 590 aa11.77□□□□□ -0.53
TIM50YPL063W NUP159P40477 1460 aa11.75□□□□□ -0.53
TIM50YPL063W PDR15Q04182 1529 aaKnown RBP11.73□□□□□ -0.53
TIM50YPL063W RPO21P04050 1733 aaKnown RBP11.73□□□□□ -0.53
TIM50YPL063W SNT2P53127 1403 aa11.7□□□□□ -0.54
TIM50YPL063W IFH1P39520 1085 aa11.7□□□□□ -0.54
TIM50YPL063W RTT106P40161 455 aa11.7□□□□□ -0.54
TIM50YPL063W ULS1Q08562 1619 aa11.7□□□□□ -0.54
TIM50YPL063W YRF1-1P0CX20 1796 aa11.65□□□□□ -0.55
TIM50YPL063W YRF1-5P0CX21 1796 aa11.65□□□□□ -0.55
TIM50YPL063W YRF1-8P0CX22 1796 aa11.65□□□□□ -0.55
TIM50YPL063W GEA2P39993 1459 aaKnown RBP11.62□□□□□ -0.55
TIM50YPL063W VPS15P22219 1454 aa11.59□□□□□ -0.55
TIM50YPL063W GEA1P47102 1408 aaPredicted RBP11.59□□□□□ -0.55
TIM50YPL063W LTE1P07866 1435 aa11.57□□□□□ -0.56
TIM50YPL063W MET10P39692 1035 aa11.56□□□□□ -0.56
TIM50YPL063W IRC20Q06554 1556 aa11.52□□□□□ -0.56
TIM50YPL063W SPO14P36126 1683 aa11.52□□□□□ -0.57
TIM50YPL063W PDR12Q02785 1511 aa11.48□□□□□ -0.57
TIM50YPL063W TY3B-GQ99315 1547 aa11.47□□□□□ -0.57
TIM50YPL063W NUP157P40064 1391 aaKnown RBP11.47□□□□□ -0.57
TIM50YPL063W GDB1Q06625 1536 aa11.45□□□□□ -0.58
TIM50YPL063W YBT1P32386 1661 aa11.44□□□□□ -0.58
TIM50YPL063W CAT8P39113 1433 aa11.43□□□□□ -0.58
TIM50YPL063W DRS2P39524 1355 aa11.42□□□□□ -0.58
TIM50YPL063W PDR10P51533 1564 aa11.42□□□□□ -0.58
TIM50YPL063W NUP170P38181 1502 aa11.41□□□□□ -0.58
TIM50YPL063W ITT1Q04638 464 aa11.38□□□□□ -0.59
TIM50YPL063W IKI3Q06706 1349 aaKnown RBP11.37□□□□□ -0.59
TIM50YPL063W CKB1P43639 278 aa11.37□□□□□ -0.59
TIM50YPL063W IQG1Q12280 1495 aa11.37□□□□□ -0.59
TIM50YPL063W BNI1P41832 1953 aa11.34□□□□□ -0.59
TIM50YPL063W ARO1P08566 1588 aaKnown RBP11.34□□□□□ -0.59
TIM50YPL063W BUD3P25558 1636 aa11.32□□□□□ -0.6
TIM50YPL063W MMS1Q06211 1407 aa11.26□□□□□ -0.61
TIM50YPL063W SSM4P40318 1319 aa11.26□□□□□ -0.61
TIM50YPL063W SRB8P25648 1427 aa11.26□□□□□ -0.61
TIM50YPL063W DOP1Q03921 1698 aa11.25□□□□□ -0.61
TIM50YPL063W TRM3Q07527 1436 aa11.24□□□□□ -0.61
TIM50YPL063W YSP2Q06681 1438 aa11.22□□□□□ -0.61
TIM50YPL063W BNR1P40450 1375 aa11.19□□□□□ -0.62
TIM50YPL063W BUD21Q08492 214 aaPredicted RBP11.18□□□□□ -0.62
TIM50YPL063W CHC1P22137 1653 aaKnown RBP11.16□□□□□ -0.62
TIM50YPL063W SEC7P11075 2009 aaKnown RBP11.16□□□□□ -0.62
TIM50YPL063W DNF2Q12675 1612 aa11.11□□□□□ -0.63
TIM50YPL063W ABP1P15891 592 aaKnown RBP11.08□□□□□ -0.64
TIM50YPL063W GCN2P15442 1659 aa11□□□□□ -0.65
TIM50YPL063W YOR093CQ12275 1648 aa10.97□□□□□ -0.65
TIM50YPL063W URN1Q06525 465 aaKnown RBP10.94□□□□□ -0.66
TIM50YPL063W NUP188P52593 1655 aaKnown RBP10.93□□□□□ -0.66
TIM50YPL063W YAP3P38749 330 aa10.92□□□□□ -0.66
TIM50YPL063W VMR1P38735 1592 aa10.91□□□□□ -0.66
TIM50YPL063W PAF1P38351 445 aa10.89□□□□□ -0.67
TIM50YPL063W PDR5P33302 1511 aaKnown RBP10.88□□□□□ -0.67
TIM50YPL063W IML1P47170 1584 aa10.87□□□□□ -0.67
TIM50YPL063W IPL1P38991 367 aa10.86□□□□□ -0.67
TIM50YPL063W NOP7P53261 605 aaKnown RBP10.86□□□□□ -0.67
TIM50YPL063W DNF3Q12674 1656 aa10.86□□□□□ -0.67
TIM50YPL063W TYS1P36421 394 aaKnown RBP10.84□□□□□ -0.67
TIM50YPL063W MIF2P35201 549 aa10.84□□□□□ -0.67
TIM50YPL063W PDR11P40550 1411 aa10.82□□□□□ -0.68
TIM50YPL063W BFR2Q06631 534 aaKnown RBP10.8□□□□□ -0.68
TIM50YPL063W RAV1P47104 1357 aa10.76□□□□□ -0.69
TIM50YPL063W MAK10Q02197 733 aa10.74□□□□□ -0.69
TIM50YPL063W RTC1Q08281 1341 aa10.71□□□□□ -0.69
TIM50YPL063W HAP1P0CE41 1502 aa10.67□□□□□ -0.7
TIM50YPL063W TAF5P38129 798 aa10.64□□□□□ -0.71
TIM50YPL063W NUP192P47054 1683 aa10.62□□□□□ -0.71
TIM50YPL063W USO1P25386 1790 aa10.62□□□□□ -0.71
TIM50YPL063W ESL2P36168 1195 aa10.61□□□□□ -0.71
TIM50YPL063W MRX12P47084 519 aa10.61□□□□□ -0.71
TIM50YPL063W ORC1P54784 914 aaPredicted RBP10.6□□□□□ -0.71
TIM50YPL063W RAD9P14737 1309 aa10.6□□□□□ -0.71
TIM50YPL063W KRE5P22023 1365 aa10.59□□□□□ -0.71
TIM50YPL063W CAB1Q04430 367 aa10.59□□□□□ -0.71
TIM50YPL063W BCK1Q01389 1478 aa10.58□□□□□ -0.72
TIM50YPL063W ALD4P46367 519 aaKnown RBP10.58□□□□□ -0.72
TIM50YPL063W RIA1P53893 1110 aa10.58□□□□□ -0.72
TIM50YPL063W POL5P39985 1022 aaKnown RBP10.57□□□□□ -0.72
TIM50YPL063W TY1B-NL2Q99337 1749 aaKnown RBP10.53□□□□□ -0.72
TIM50YPL063W YFR006WP43590 535 aa10.53□□□□□ -0.72
TIM50YPL063W KIP3P53086 805 aaKnown RBP10.53□□□□□ -0.72
TIM50YPL063W TAF8Q03750 510 aa10.53□□□□□ -0.72
TIM50YPL063W NAP1P25293 417 aaKnown RBP10.52□□□□□ -0.73
TIM50YPL063W YMR196WQ04336 1088 aa10.5□□□□□ -0.73
TIM50YPL063W CFT1Q06632 1357 aaKnown RBP10.5□□□□□ -0.73
TIM50YPL063W TY3B-IQ7LHG5 1498 aaKnown RBP10.5□□□□□ -0.73
TIM50YPL063W SPE2P21182 396 aa10.48□□□□□ -0.73
TIM50YPL063W THI12P42883 340 aa10.46□□□□□ -0.74
TIM50YPL063W THI5P43534 340 aa10.46□□□□□ -0.74
TIM50YPL063W THI11P47183 340 aa10.46□□□□□ -0.74
TIM50YPL063W YNR029CP53729 429 aaKnown RBP10.46□□□□□ -0.74
TIM50YPL063W THI13Q07748 340 aa10.46□□□□□ -0.74
TIM50YPL063W YLR419WQ06698 1435 aaKnown RBP10.44□□□□□ -0.74
TIM50YPL063W SCT1P32784 759 aa10.4□□□□□ -0.75
TIM50YPL063W RCM1P53972 490 aa10.39□□□□□ -0.75
TIM50YPL063W CHZ1P40019 153 aaPredicted RBP10.38□□□□□ -0.75
TIM50YPL063W MHP1P43638 1398 aa10.37□□□□□ -0.75
TIM50YPL063W PPH3P32345 308 aa10.33□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 697.1 ms