RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C TY1B-BLQ12490 1755 aa14.05□□□□□ -0.16
SSN3YPL042C TRM732Q03496 1420 aa14.05□□□□□ -0.16
SSN3YPL042C MLP2P40457 1679 aa14□□□□□ -0.17
SSN3YPL042C PDR15Q04182 1529 aaKnown RBP13.97□□□□□ -0.17
SSN3YPL042C NTE1Q04958 1679 aa13.96□□□□□ -0.17
SSN3YPL042C SNT2P53127 1403 aa13.96□□□□□ -0.17
SSN3YPL042C ULS1Q08562 1619 aa13.96□□□□□ -0.18
SSN3YPL042C MET5P47169 1442 aa13.92□□□□□ -0.18
SSN3YPL042C RPO21P04050 1733 aaKnown RBP13.91□□□□□ -0.18
SSN3YPL042C NUP159P40477 1460 aa13.88□□□□□ -0.19
SSN3YPL042C GEA1P47102 1408 aaPredicted RBP13.82□□□□□ -0.2
SSN3YPL042C GEA2P39993 1459 aaKnown RBP13.81□□□□□ -0.2
SSN3YPL042C IFH1P39520 1085 aa13.79□□□□□ -0.2
SSN3YPL042C YRF1-1P0CX20 1796 aa13.78□□□□□ -0.2
SSN3YPL042C YRF1-5P0CX21 1796 aa13.78□□□□□ -0.2
SSN3YPL042C YRF1-8P0CX22 1796 aa13.78□□□□□ -0.2
SSN3YPL042C IRC20Q06554 1556 aa13.76□□□□□ -0.21
SSN3YPL042C RTT106P40161 455 aa13.75□□□□□ -0.21
SSN3YPL042C TY3B-GQ99315 1547 aa13.71□□□□□ -0.21
SSN3YPL042C VPS15P22219 1454 aa13.69□□□□□ -0.22
SSN3YPL042C PDR12Q02785 1511 aa13.69□□□□□ -0.22
SSN3YPL042C MET10P39692 1035 aa13.66□□□□□ -0.22
SSN3YPL042C IKI3Q06706 1349 aaKnown RBP13.65□□□□□ -0.22
SSN3YPL042C YBT1P32386 1661 aa13.65□□□□□ -0.23
SSN3YPL042C SPO14P36126 1683 aa13.65□□□□□ -0.23
SSN3YPL042C CAT8P39113 1433 aa13.64□□□□□ -0.23
SSN3YPL042C NUP170P38181 1502 aa13.63□□□□□ -0.23
SSN3YPL042C GDB1Q06625 1536 aa13.62□□□□□ -0.23
SSN3YPL042C LTE1P07866 1435 aa13.61□□□□□ -0.23
SSN3YPL042C PDR10P51533 1564 aa13.59□□□□□ -0.23
SSN3YPL042C NUP157P40064 1391 aaKnown RBP13.56□□□□□ -0.24
SSN3YPL042C ARO1P08566 1588 aaKnown RBP13.5□□□□□ -0.25
SSN3YPL042C LEO1P38439 464 aa13.5□□□□□ -0.25
SSN3YPL042C SSM4P40318 1319 aa13.47□□□□□ -0.25
SSN3YPL042C IQG1Q12280 1495 aa13.46□□□□□ -0.25
SSN3YPL042C BUD3P25558 1636 aa13.42□□□□□ -0.26
SSN3YPL042C SRB8P25648 1427 aa13.42□□□□□ -0.26
SSN3YPL042C DMA1P38823 416 aa13.41□□□□□ -0.26
SSN3YPL042C DRS2P39524 1355 aa13.4□□□□□ -0.26
SSN3YPL042C CKB1P43639 278 aa13.38□□□□□ -0.27
SSN3YPL042C YSP2Q06681 1438 aa13.38□□□□□ -0.27
SSN3YPL042C BNI1P41832 1953 aa13.37□□□□□ -0.27
SSN3YPL042C NAP1P25293 417 aaKnown RBP13.34□□□□□ -0.27
SSN3YPL042C TRM3Q07527 1436 aa13.32□□□□□ -0.28
SSN3YPL042C DOP1Q03921 1698 aa13.32□□□□□ -0.28
SSN3YPL042C ITT1Q04638 464 aa13.31□□□□□ -0.28
SSN3YPL042C IOC4Q04213 475 aa13.3□□□□□ -0.28
SSN3YPL042C MMS1Q06211 1407 aa13.29□□□□□ -0.28
SSN3YPL042C SEC7P11075 2009 aaKnown RBP13.29□□□□□ -0.28
SSN3YPL042C BNR1P40450 1375 aa13.23□□□□□ -0.29
SSN3YPL042C CHC1P22137 1653 aaKnown RBP13.23□□□□□ -0.29
SSN3YPL042C BUD21Q08492 214 aaPredicted RBP13.21□□□□□ -0.3
SSN3YPL042C SIS2P36024 562 aa13.19□□□□□ -0.3
SSN3YPL042C YRB30P53107 440 aaPredicted RBP13.18□□□□□ -0.3
SSN3YPL042C GCN2P15442 1659 aa13.16□□□□□ -0.3
SSN3YPL042C AIM44Q99299 758 aa13.07□□□□□ -0.32
SSN3YPL042C DNF2Q12675 1612 aa13.07□□□□□ -0.32
SSN3YPL042C YOR093CQ12275 1648 aa13.04□□□□□ -0.32
SSN3YPL042C PDR5P33302 1511 aaKnown RBP13.01□□□□□ -0.33
SSN3YPL042C VMR1P38735 1592 aa13□□□□□ -0.33
SSN3YPL042C NUP188P52593 1655 aaKnown RBP12.99□□□□□ -0.33
SSN3YPL042C YFR016CP43597 1233 aaKnown RBP12.99□□□□□ -0.33
SSN3YPL042C IML1P47170 1584 aa12.92□□□□□ -0.34
SSN3YPL042C PAF1P38351 445 aa12.89□□□□□ -0.35
SSN3YPL042C PDR11P40550 1411 aa12.89□□□□□ -0.35
SSN3YPL042C NOP7P53261 605 aaKnown RBP12.88□□□□□ -0.35
SSN3YPL042C EBP2P36049 427 aaKnown RBP12.86□□□□□ -0.35
SSN3YPL042C YAP3P38749 330 aa12.86□□□□□ -0.35
SSN3YPL042C RAV1P47104 1357 aa12.85□□□□□ -0.35
SSN3YPL042C IPL1P38991 367 aa12.84□□□□□ -0.35
SSN3YPL042C ABP1P15891 592 aaKnown RBP12.81□□□□□ -0.36
SSN3YPL042C DNF3Q12674 1656 aa12.81□□□□□ -0.36
SSN3YPL042C TYS1P36421 394 aaKnown RBP12.8□□□□□ -0.36
SSN3YPL042C DIP2Q12220 943 aaPredicted RBP12.8□□□□□ -0.36
SSN3YPL042C HAP1P0CE41 1502 aa12.79□□□□□ -0.36
SSN3YPL042C RTC1Q08281 1341 aa12.78□□□□□ -0.36
SSN3YPL042C KRI1P42846 591 aaKnown RBP12.75□□□□□ -0.37
SSN3YPL042C NUP192P47054 1683 aa12.69□□□□□ -0.38
SSN3YPL042C RPS0BP46654 252 aaKnown RBP12.68□□□□□ -0.38
SSN3YPL042C CAB3P36076 571 aa12.67□□□□□ -0.38
SSN3YPL042C POL5P39985 1022 aaKnown RBP12.64□□□□□ -0.39
SSN3YPL042C ORC1P54784 914 aaPredicted RBP12.64□□□□□ -0.39
SSN3YPL042C AVT3P36062 692 aa12.62□□□□□ -0.39
SSN3YPL042C SNU71P53207 620 aaKnown RBP12.62□□□□□ -0.39
SSN3YPL042C TY3B-IQ7LHG5 1498 aaKnown RBP12.62□□□□□ -0.39
SSN3YPL042C MAK10Q02197 733 aa12.61□□□□□ -0.39
SSN3YPL042C ESL2P36168 1195 aa12.61□□□□□ -0.39
SSN3YPL042C TAF5P38129 798 aa12.6□□□□□ -0.39
SSN3YPL042C BCK1Q01389 1478 aa12.58□□□□□ -0.4
SSN3YPL042C TOP1P04786 769 aa12.57□□□□□ -0.4
SSN3YPL042C ALD4P46367 519 aaKnown RBP12.54□□□□□ -0.4
SSN3YPL042C RAD9P14737 1309 aa12.54□□□□□ -0.4
SSN3YPL042C MIF2P35201 549 aa12.51□□□□□ -0.41
SSN3YPL042C YLR419WQ06698 1435 aaKnown RBP12.5□□□□□ -0.41
SSN3YPL042C KRE5P22023 1365 aa12.49□□□□□ -0.41
SSN3YPL042C KIP3P53086 805 aaKnown RBP12.49□□□□□ -0.41
SSN3YPL042C CAB1Q04430 367 aa12.49□□□□□ -0.41
SSN3YPL042C MNN4P36044 1178 aa12.48□□□□□ -0.41
SSN3YPL042C CFT1Q06632 1357 aaKnown RBP12.47□□□□□ -0.41
SSN3YPL042C TY1B-NL2Q99337 1749 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms