RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W SNT2P53127 1403 aa12.96□□□□□ -0.33
AMF1YOR378W NUP159P40477 1460 aa12.95□□□□□ -0.34
AMF1YOR378W NTE1Q04958 1679 aa12.94□□□□□ -0.34
AMF1YOR378W MLP2P40457 1679 aa12.92□□□□□ -0.34
AMF1YOR378W PDR15Q04182 1529 aaKnown RBP12.92□□□□□ -0.34
AMF1YOR378W RPO21P04050 1733 aaKnown RBP12.9□□□□□ -0.34
AMF1YOR378W ULS1Q08562 1619 aa12.88□□□□□ -0.35
AMF1YOR378W RTT106P40161 455 aa12.86□□□□□ -0.35
AMF1YOR378W IFH1P39520 1085 aa12.83□□□□□ -0.35
AMF1YOR378W GEA2P39993 1459 aaKnown RBP12.83□□□□□ -0.36
AMF1YOR378W GEA1P47102 1408 aaPredicted RBP12.8□□□□□ -0.36
AMF1YOR378W YRF1-1P0CX20 1796 aa12.8□□□□□ -0.36
AMF1YOR378W YRF1-5P0CX21 1796 aa12.8□□□□□ -0.36
AMF1YOR378W YRF1-8P0CX22 1796 aa12.8□□□□□ -0.36
AMF1YOR378W VPS15P22219 1454 aa12.78□□□□□ -0.36
AMF1YOR378W LTE1P07866 1435 aa12.78□□□□□ -0.36
AMF1YOR378W MET10P39692 1035 aa12.78□□□□□ -0.36
AMF1YOR378W IRC20Q06554 1556 aa12.73□□□□□ -0.37
AMF1YOR378W PDR12Q02785 1511 aa12.71□□□□□ -0.37
AMF1YOR378W CAT8P39113 1433 aa12.66□□□□□ -0.38
AMF1YOR378W SPO14P36126 1683 aa12.66□□□□□ -0.38
AMF1YOR378W TY3B-GQ99315 1547 aa12.65□□□□□ -0.38
AMF1YOR378W GDB1Q06625 1536 aa12.64□□□□□ -0.39
AMF1YOR378W NUP157P40064 1391 aaKnown RBP12.64□□□□□ -0.39
AMF1YOR378W PDR10P51533 1564 aa12.6□□□□□ -0.39
AMF1YOR378W IKI3Q06706 1349 aaKnown RBP12.6□□□□□ -0.39
AMF1YOR378W YBT1P32386 1661 aa12.57□□□□□ -0.4
AMF1YOR378W DRS2P39524 1355 aa12.57□□□□□ -0.4
AMF1YOR378W NUP170P38181 1502 aa12.55□□□□□ -0.4
AMF1YOR378W IQG1Q12280 1495 aa12.55□□□□□ -0.4
AMF1YOR378W ITT1Q04638 464 aa12.52□□□□□ -0.4
AMF1YOR378W BUD3P25558 1636 aa12.5□□□□□ -0.41
AMF1YOR378W BNI1P41832 1953 aa12.49□□□□□ -0.41
AMF1YOR378W CKB1P43639 278 aa12.49□□□□□ -0.41
AMF1YOR378W ARO1P08566 1588 aaKnown RBP12.48□□□□□ -0.41
AMF1YOR378W SRB8P25648 1427 aa12.45□□□□□ -0.42
AMF1YOR378W YSP2Q06681 1438 aa12.43□□□□□ -0.42
AMF1YOR378W TRM3Q07527 1436 aa12.43□□□□□ -0.42
AMF1YOR378W SSM4P40318 1319 aa12.42□□□□□ -0.42
AMF1YOR378W MMS1Q06211 1407 aa12.4□□□□□ -0.43
AMF1YOR378W DOP1Q03921 1698 aa12.37□□□□□ -0.43
AMF1YOR378W SEC7P11075 2009 aaKnown RBP12.34□□□□□ -0.43
AMF1YOR378W BNR1P40450 1375 aa12.33□□□□□ -0.43
AMF1YOR378W BUD21Q08492 214 aaPredicted RBP12.32□□□□□ -0.44
AMF1YOR378W CHC1P22137 1653 aaKnown RBP12.26□□□□□ -0.45
AMF1YOR378W DNF2Q12675 1612 aa12.19□□□□□ -0.46
AMF1YOR378W ABP1P15891 592 aaKnown RBP12.14□□□□□ -0.47
AMF1YOR378W GCN2P15442 1659 aa12.13□□□□□ -0.47
AMF1YOR378W URN1Q06525 465 aaKnown RBP12.11□□□□□ -0.47
AMF1YOR378W YAP3P38749 330 aa12.06□□□□□ -0.48
AMF1YOR378W YOR093CQ12275 1648 aa12.06□□□□□ -0.48
AMF1YOR378W NUP188P52593 1655 aaKnown RBP12.04□□□□□ -0.48
AMF1YOR378W PDR5P33302 1511 aaKnown RBP12.02□□□□□ -0.48
AMF1YOR378W VMR1P38735 1592 aa12.01□□□□□ -0.49
AMF1YOR378W PAF1P38351 445 aa12.01□□□□□ -0.49
AMF1YOR378W IPL1P38991 367 aa12.01□□□□□ -0.49
AMF1YOR378W IML1P47170 1584 aa11.98□□□□□ -0.49
AMF1YOR378W NOP7P53261 605 aaKnown RBP11.96□□□□□ -0.49
AMF1YOR378W TYS1P36421 394 aaKnown RBP11.94□□□□□ -0.5
AMF1YOR378W PDR11P40550 1411 aa11.94□□□□□ -0.5
AMF1YOR378W BFR2Q06631 534 aaKnown RBP11.93□□□□□ -0.5
AMF1YOR378W DNF3Q12674 1656 aa11.93□□□□□ -0.5
AMF1YOR378W MIF2P35201 549 aa11.91□□□□□ -0.5
AMF1YOR378W RAV1P47104 1357 aa11.91□□□□□ -0.5
AMF1YOR378W HAP1P0CE41 1502 aa11.89□□□□□ -0.51
AMF1YOR378W RTC1Q08281 1341 aa11.86□□□□□ -0.51
AMF1YOR378W MAK10Q02197 733 aa11.84□□□□□ -0.51
AMF1YOR378W ESL2P36168 1195 aa11.72□□□□□ -0.53
AMF1YOR378W TAF5P38129 798 aa11.7□□□□□ -0.54
AMF1YOR378W NUP192P47054 1683 aa11.7□□□□□ -0.54
AMF1YOR378W ALD4P46367 519 aaKnown RBP11.7□□□□□ -0.54
AMF1YOR378W BCK1Q01389 1478 aa11.68□□□□□ -0.54
AMF1YOR378W MRX12P47084 519 aa11.67□□□□□ -0.54
AMF1YOR378W RAD9P14737 1309 aa11.66□□□□□ -0.54
AMF1YOR378W POL5P39985 1022 aaKnown RBP11.65□□□□□ -0.54
AMF1YOR378W KRE5P22023 1365 aa11.64□□□□□ -0.55
AMF1YOR378W CAB1Q04430 367 aa11.64□□□□□ -0.55
AMF1YOR378W TY3B-IQ7LHG5 1498 aaKnown RBP11.63□□□□□ -0.55
AMF1YOR378W TY1B-NL2Q99337 1749 aaKnown RBP11.62□□□□□ -0.55
AMF1YOR378W RIA1P53893 1110 aa11.62□□□□□ -0.55
AMF1YOR378W CFT1Q06632 1357 aaKnown RBP11.62□□□□□ -0.55
AMF1YOR378W NAP1P25293 417 aaKnown RBP11.61□□□□□ -0.55
AMF1YOR378W YMR196WQ04336 1088 aa11.6□□□□□ -0.55
AMF1YOR378W TAF8Q03750 510 aa11.59□□□□□ -0.55
AMF1YOR378W USO1P25386 1790 aa11.58□□□□□ -0.55
AMF1YOR378W KIP3P53086 805 aaKnown RBP11.58□□□□□ -0.56
AMF1YOR378W ORC1P54784 914 aaPredicted RBP11.58□□□□□ -0.56
AMF1YOR378W YFR006WP43590 535 aa11.55□□□□□ -0.56
AMF1YOR378W SPE2P21182 396 aa11.55□□□□□ -0.56
AMF1YOR378W SCT1P32784 759 aa11.55□□□□□ -0.56
AMF1YOR378W YNR029CP53729 429 aaKnown RBP11.54□□□□□ -0.56
AMF1YOR378W YLR419WQ06698 1435 aaKnown RBP11.54□□□□□ -0.56
AMF1YOR378W THI12P42883 340 aa11.51□□□□□ -0.57
AMF1YOR378W THI5P43534 340 aa11.51□□□□□ -0.57
AMF1YOR378W THI11P47183 340 aa11.51□□□□□ -0.57
AMF1YOR378W THI13Q07748 340 aa11.51□□□□□ -0.57
AMF1YOR378W MHP1P43638 1398 aa11.47□□□□□ -0.57
AMF1YOR378W CHZ1P40019 153 aaPredicted RBP11.43□□□□□ -0.58
AMF1YOR378W RCM1P53972 490 aa11.42□□□□□ -0.58
AMF1YOR378W CPS1P27614 576 aa11.4□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms