RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeastyeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEP3YOR205C STH1P32597 1359 aa8.14□□□□□ -1.11
GEP3YOR205C DNF1P32660 1571 aa8.12□□□□□ -1.11
GEP3YOR205C RPA190P10964 1664 aaKnown RBP8.08□□□□□ -1.12
GEP3YOR205C MLP2P40457 1679 aa8.07□□□□□ -1.12
GEP3YOR205C PDR15Q04182 1529 aaKnown RBP8.06□□□□□ -1.12
GEP3YOR205C NTE1Q04958 1679 aa8.05□□□□□ -1.12
GEP3YOR205C MET5P47169 1442 aa8.04□□□□□ -1.12
GEP3YOR205C TY1B-JR2P47100 1755 aaKnown RBP8.04□□□□□ -1.12
GEP3YOR205C TY1B-ER2Q03619 1755 aa8.04□□□□□ -1.12
GEP3YOR205C TY1B-MR1Q04214 1755 aa8.04□□□□□ -1.12
GEP3YOR205C TY1B-MR2Q04670 1755 aaKnown RBP8.04□□□□□ -1.12
GEP3YOR205C TY1B-LR1Q12088 1755 aaKnown RBP8.04□□□□□ -1.12
GEP3YOR205C TY1B-NL1Q12112 1755 aa8.04□□□□□ -1.12
GEP3YOR205C TY1B-GR1Q12141 1755 aa8.04□□□□□ -1.12
GEP3YOR205C TY1B-BLQ12490 1755 aa8.04□□□□□ -1.12
GEP3YOR205C NUP159P40477 1460 aa8.03□□□□□ -1.12
GEP3YOR205C IFH1P39520 1085 aa8.03□□□□□ -1.12
GEP3YOR205C RTT106P40161 455 aa8.03□□□□□ -1.12
GEP3YOR205C SNT2P53127 1403 aa8.02□□□□□ -1.13
GEP3YOR205C ULS1Q08562 1619 aa8.01□□□□□ -1.13
GEP3YOR205C RPO21P04050 1733 aaKnown RBP8□□□□□ -1.13
GEP3YOR205C GEA2P39993 1459 aaKnown RBP7.99□□□□□ -1.13
GEP3YOR205C SIS1P25294 352 aaKnown RBP7.98□□□□□ -1.13
GEP3YOR205C GEA1P47102 1408 aaPredicted RBP7.98□□□□□ -1.13
GEP3YOR205C VPS15P22219 1454 aa7.93□□□□□ -1.14
GEP3YOR205C MET10P39692 1035 aa7.92□□□□□ -1.14
GEP3YOR205C IRC20Q06554 1556 aa7.91□□□□□ -1.14
GEP3YOR205C LTE1P07866 1435 aa7.9□□□□□ -1.14
GEP3YOR205C CAT8P39113 1433 aa7.89□□□□□ -1.15
GEP3YOR205C YRF1-1P0CX20 1796 aa7.88□□□□□ -1.15
GEP3YOR205C YRF1-5P0CX21 1796 aa7.88□□□□□ -1.15
GEP3YOR205C YRF1-8P0CX22 1796 aa7.88□□□□□ -1.15
GEP3YOR205C IKI3Q06706 1349 aaKnown RBP7.88□□□□□ -1.15
GEP3YOR205C PDR12Q02785 1511 aa7.88□□□□□ -1.15
GEP3YOR205C TY3B-GQ99315 1547 aa7.86□□□□□ -1.15
GEP3YOR205C NUP157P40064 1391 aaKnown RBP7.86□□□□□ -1.15
GEP3YOR205C GDB1Q06625 1536 aa7.85□□□□□ -1.15
GEP3YOR205C SPO14P36126 1683 aa7.85□□□□□ -1.15
GEP3YOR205C PDR10P51533 1564 aa7.83□□□□□ -1.16
GEP3YOR205C YBT1P32386 1661 aa7.83□□□□□ -1.16
GEP3YOR205C NUP170P38181 1502 aa7.81□□□□□ -1.16
GEP3YOR205C DRS2P39524 1355 aa7.8□□□□□ -1.16
GEP3YOR205C IQG1Q12280 1495 aa7.8□□□□□ -1.16
GEP3YOR205C CKB1P43639 278 aa7.79□□□□□ -1.16
GEP3YOR205C ARO1P08566 1588 aaKnown RBP7.78□□□□□ -1.16
GEP3YOR205C BUD3P25558 1636 aa7.78□□□□□ -1.16
GEP3YOR205C SRB8P25648 1427 aa7.76□□□□□ -1.17
GEP3YOR205C SSM4P40318 1319 aa7.76□□□□□ -1.17
GEP3YOR205C TRM3Q07527 1436 aa7.73□□□□□ -1.17
GEP3YOR205C ITT1Q04638 464 aa7.71□□□□□ -1.18
GEP3YOR205C MMS1Q06211 1407 aa7.7□□□□□ -1.18
GEP3YOR205C BUD21Q08492 214 aaPredicted RBP7.7□□□□□ -1.18
GEP3YOR205C YSP2Q06681 1438 aa7.69□□□□□ -1.18
GEP3YOR205C DOP1Q03921 1698 aa7.69□□□□□ -1.18
GEP3YOR205C BNR1P40450 1375 aa7.68□□□□□ -1.18
GEP3YOR205C BNI1P41832 1953 aa7.65□□□□□ -1.18
GEP3YOR205C UBP9P39967 754 aa7.64□□□□□ -1.19
GEP3YOR205C CHC1P22137 1653 aaKnown RBP7.64□□□□□ -1.19
GEP3YOR205C GCN2P15442 1659 aa7.58□□□□□ -1.2
GEP3YOR205C CDC27P38042 758 aa7.57□□□□□ -1.2
GEP3YOR205C UBP10P53874 792 aaPredicted RBP7.57□□□□□ -1.2
GEP3YOR205C SEC7P11075 2009 aaKnown RBP7.57□□□□□ -1.2
GEP3YOR205C MAP2P38174 421 aaKnown RBP7.55□□□□□ -1.2
GEP3YOR205C DNF2Q12675 1612 aa7.55□□□□□ -1.2
GEP3YOR205C PAF1P38351 445 aa7.54□□□□□ -1.2
GEP3YOR205C URN1Q06525 465 aaKnown RBP7.54□□□□□ -1.2
GEP3YOR205C NOP7P53261 605 aaKnown RBP7.54□□□□□ -1.2
GEP3YOR205C YOR093CQ12275 1648 aa7.52□□□□□ -1.21
GEP3YOR205C ABP1P15891 592 aaKnown RBP7.51□□□□□ -1.21
GEP3YOR205C PDR5P33302 1511 aaKnown RBP7.5□□□□□ -1.21
GEP3YOR205C NUP188P52593 1655 aaKnown RBP7.49□□□□□ -1.21
GEP3YOR205C REB1P21538 810 aa7.49□□□□□ -1.21
GEP3YOR205C IML1P47170 1584 aa7.48□□□□□ -1.21
GEP3YOR205C VMR1P38735 1592 aa7.47□□□□□ -1.21
GEP3YOR205C BFR2Q06631 534 aaKnown RBP7.47□□□□□ -1.21
GEP3YOR205C YAP3P38749 330 aa7.46□□□□□ -1.22
GEP3YOR205C IPL1P38991 367 aa7.44□□□□□ -1.22
GEP3YOR205C RAV1P47104 1357 aa7.43□□□□□ -1.22
GEP3YOR205C DNF3Q12674 1656 aa7.4□□□□□ -1.22
GEP3YOR205C TYS1P36421 394 aaKnown RBP7.4□□□□□ -1.23
GEP3YOR205C PDR11P40550 1411 aa7.4□□□□□ -1.23
GEP3YOR205C RTC1Q08281 1341 aa7.39□□□□□ -1.23
GEP3YOR205C POL5P39985 1022 aaKnown RBP7.36□□□□□ -1.23
GEP3YOR205C HAP1P0CE41 1502 aa7.36□□□□□ -1.23
GEP3YOR205C RPL17AP05740 184 aaKnown RBP7.35□□□□□ -1.23
GEP3YOR205C RPL17BP46990 184 aaKnown RBP7.35□□□□□ -1.23
GEP3YOR205C TIF4632P39936 914 aaKnown RBP7.34□□□□□ -1.23
GEP3YOR205C ESL2P36168 1195 aa7.33□□□□□ -1.24
GEP3YOR205C MAK10Q02197 733 aa7.33□□□□□ -1.24
GEP3YOR205C MIF2P35201 549 aa7.32□□□□□ -1.24
GEP3YOR205C TAF5P38129 798 aa7.32□□□□□ -1.24
GEP3YOR205C NAP1P25293 417 aaKnown RBP7.3□□□□□ -1.24
GEP3YOR205C TGL3P40308 642 aa7.3□□□□□ -1.24
GEP3YOR205C MRX12P47084 519 aa7.3□□□□□ -1.24
GEP3YOR205C SCT1P32784 759 aa7.29□□□□□ -1.24
GEP3YOR205C ORC1P54784 914 aaPredicted RBP7.28□□□□□ -1.24
GEP3YOR205C NUP192P47054 1683 aa7.27□□□□□ -1.25
GEP3YOR205C BCK1Q01389 1478 aa7.27□□□□□ -1.25
GEP3YOR205C ALD4P46367 519 aaKnown RBP7.27□□□□□ -1.25
GEP3YOR205C TY3B-IQ7LHG5 1498 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms