RNA–Protein interactions for RNA: YOL113W

SKM1, Transcript of Member of the PAK family of serine/threonine protein kinases, yeastyeast

Gene SKM1, Length 1,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKM1YOL113W TPO2P53283 614 aa6.06□□□□□ -1.44
SKM1YOL113W TFB3Q03290 321 aa6.06□□□□□ -1.44
SKM1YOL113W VPS72Q03388 795 aa6.06□□□□□ -1.44
SKM1YOL113W GIN4Q12263 1142 aa6.06□□□□□ -1.44
SKM1YOL113W SSF1P38789 453 aaPredicted RBP6.04□□□□□ -1.44
SKM1YOL113W DOS2P54858 310 aa6.04□□□□□ -1.44
SKM1YOL113W ASF1P32447 279 aa6.04□□□□□ -1.44
SKM1YOL113W OCA5P38738 679 aa6.04□□□□□ -1.44
SKM1YOL113W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
SKM1YOL113W DIT2P21595 489 aa6.02□□□□□ -1.45
SKM1YOL113W PKC1P24583 1151 aa6.02□□□□□ -1.45
SKM1YOL113W EPS1P40557 701 aa6.02□□□□□ -1.45
SKM1YOL113W KRI1P42846 591 aaKnown RBP6.02□□□□□ -1.45
SKM1YOL113W BBC1P47068 1157 aa6.02□□□□□ -1.45
SKM1YOL113W HPC2Q01448 625 aa6.02□□□□□ -1.45
SKM1YOL113W UBP10P53874 792 aaPredicted RBP6.01□□□□□ -1.45
SKM1YOL113W SEN54Q02825 467 aaPredicted RBP6.01□□□□□ -1.45
SKM1YOL113W BUD21Q08492 214 aaPredicted RBP6.01□□□□□ -1.45
SKM1YOL113W ALD4P46367 519 aaKnown RBP6□□□□□ -1.45
SKM1YOL113W YGL015CP33199 130 aa6□□□□□ -1.45
SKM1YOL113W MAP2P38174 421 aaKnown RBP6□□□□□ -1.45
SKM1YOL113W HEM3P28789 327 aa5.99□□□□□ -1.45
SKM1YOL113W BDF1P35817 686 aa5.99□□□□□ -1.45
SKM1YOL113W YFR016CP43597 1233 aaKnown RBP5.99□□□□□ -1.45
SKM1YOL113W OSW7P43611 510 aa5.98□□□□□ -1.45
SKM1YOL113W SCY1P53009 804 aa5.98□□□□□ -1.45
SKM1YOL113W BIM1P40013 344 aa5.98□□□□□ -1.45
SKM1YOL113W IES2P40154 320 aa5.98□□□□□ -1.45
SKM1YOL113W SSA4P22202 642 aaKnown RBP5.97□□□□□ -1.45
SKM1YOL113W GLN1P32288 370 aaKnown RBP5.97□□□□□ -1.45
SKM1YOL113W NUP42P49686 430 aaKnown RBP5.97□□□□□ -1.45
SKM1YOL113W ATG32P40458 529 aa5.96□□□□□ -1.46
SKM1YOL113W YAF9P53930 226 aa5.95□□□□□ -1.46
SKM1YOL113W PDR1P12383 1068 aa5.95□□□□□ -1.46
SKM1YOL113W YJL007CP47080 104 aa5.95□□□□□ -1.46
SKM1YOL113W CPS1P27614 576 aa5.94□□□□□ -1.46
SKM1YOL113W CDC3P32457 520 aaKnown RBP5.94□□□□□ -1.46
SKM1YOL113W UBX5Q06682 500 aa5.93□□□□□ -1.46
SKM1YOL113W RPL34AP87262 121 aaPredicted RBP5.93□□□□□ -1.46
SKM1YOL113W ITT1Q04638 464 aa5.92□□□□□ -1.46
SKM1YOL113W NOB1Q08444 459 aaKnown RBP5.92□□□□□ -1.46
SKM1YOL113W ERG12P07277 443 aa5.91□□□□□ -1.46
SKM1YOL113W ATF2P53296 535 aa5.91□□□□□ -1.46
SKM1YOL113W MAK21Q12176 1025 aaKnown RBP5.91□□□□□ -1.46
SKM1YOL113W CST6P40535 587 aa5.91□□□□□ -1.46
SKM1YOL113W NMD2P38798 1089 aaKnown RBP5.9□□□□□ -1.46
SKM1YOL113W FPR4Q06205 392 aaPredicted RBP5.9□□□□□ -1.46
SKM1YOL113W HAT1Q12341 374 aa5.9□□□□□ -1.46
SKM1YOL113W MRM1P25270 412 aa5.89□□□□□ -1.47
SKM1YOL113W MNN4P36044 1178 aa5.89□□□□□ -1.47
SKM1YOL113W ALD2P47771 506 aa5.89□□□□□ -1.47
SKM1YOL113W ZDS1P50111 915 aaKnown RBP5.89□□□□□ -1.47
SKM1YOL113W TOM20P35180 183 aa5.89□□□□□ -1.47
SKM1YOL113W SIS2P36024 562 aa5.89□□□□□ -1.47
SKM1YOL113W KEX1P09620 729 aa5.87□□□□□ -1.47
SKM1YOL113W SLX5P32828 619 aaKnown RBP5.87□□□□□ -1.47
SKM1YOL113W RCR1P38212 213 aa5.87□□□□□ -1.47
SKM1YOL113W IPL1P38991 367 aa5.87□□□□□ -1.47
SKM1YOL113W RNH70P53331 553 aa5.87□□□□□ -1.47
SKM1YOL113W TIF1P10081 395 aaKnown RBP5.86□□□□□ -1.47
SKM1YOL113W NNF1P47149 201 aa5.86□□□□□ -1.47
SKM1YOL113W TTI1P36097 1038 aa5.86□□□□□ -1.47
SKM1YOL113W YML083CQ04526 418 aa5.86□□□□□ -1.47
SKM1YOL113W NAB3P38996 802 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
SKM1YOL113W TSR4P25040 408 aa5.84□□□□□ -1.47
SKM1YOL113W PMC1P38929 1173 aaPredicted RBP5.84□□□□□ -1.47
SKM1YOL113W YPR204WQ08995 1032 aa5.84□□□□□ -1.48
SKM1YOL113W RTG3P38165 486 aa5.83□□□□□ -1.48
SKM1YOL113W AIM21P40563 679 aa5.83□□□□□ -1.48
SKM1YOL113W RPL34BP40525 121 aaKnown RBP5.82□□□□□ -1.48
SKM1YOL113W RPS0BP46654 252 aaKnown RBP5.82□□□□□ -1.48
SKM1YOL113W KIP3P53086 805 aaKnown RBP5.82□□□□□ -1.48
SKM1YOL113W REF2P42073 533 aaPredicted RBP5.82□□□□□ -1.48
SKM1YOL113W RPA135P22138 1203 aaKnown RBP5.8□□□□□ -1.48
SKM1YOL113W ISW1P38144 1129 aa5.8□□□□□ -1.48
SKM1YOL113W TOA1P32773 286 aa5.8□□□□□ -1.48
SKM1YOL113W PPG1P32838 368 aa5.8□□□□□ -1.48
SKM1YOL113W RRP15Q06511 250 aaPredicted RBP5.79□□□□□ -1.48
SKM1YOL113W YOL098CQ12496 1037 aa5.79□□□□□ -1.48
SKM1YOL113W ATE1P16639 503 aa5.78□□□□□ -1.48
SKM1YOL113W GAL11P19659 1081 aa5.78□□□□□ -1.48
SKM1YOL113W VPS29P38759 282 aa5.78□□□□□ -1.48
SKM1YOL113W SSA2P10592 639 aaKnown RBP5.78□□□□□ -1.48
SKM1YOL113W MAK11P20484 414 aaKnown RBP5.78□□□□□ -1.48
SKM1YOL113W PUP1P25043 261 aa5.78□□□□□ -1.48
SKM1YOL113W BIO2P32451 375 aa5.78□□□□□ -1.48
SKM1YOL113W TPM2P40414 161 aa5.78□□□□□ -1.48
SKM1YOL113W CSN12P47130 423 aa5.78□□□□□ -1.48
SKM1YOL113W BRE1Q07457 700 aaKnown RBP5.78□□□□□ -1.48
SKM1YOL113W HIF1Q12373 385 aa5.78□□□□□ -1.48
SKM1YOL113W RTG2P32608 588 aaKnown RBP5.77□□□□□ -1.49
SKM1YOL113W RRP14P36080 434 aaKnown RBP5.77□□□□□ -1.49
SKM1YOL113W TY4A-JP47023 414 aa5.77□□□□□ -1.49
SKM1YOL113W CWC22P53333 577 aaKnown RBP5.77□□□□□ -1.49
SKM1YOL113W YOL057WQ08225 711 aa5.77□□□□□ -1.49
SKM1YOL113W STM1P39015 273 aaKnown RBP5.76□□□□□ -1.49
SKM1YOL113W MAG2Q06436 670 aaKnown RBP5.76□□□□□ -1.49
SKM1YOL113W COX6P00427 148 aa5.75□□□□□ -1.49
SKM1YOL113W CIT2P08679 460 aa5.74□□□□□ -1.49
SKM1YOL113W SSB1P11484 613 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms